RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 CSDC2Q9Y534 153 aaKnown RBP12.6□□□□□ -0.39
CD40-206ENST00000489304 TRBV6-8A0A0A6YYG3 113 aa12.59□□□□□ -0.39
CD40-206ENST00000489304 F5H768 121 aa12.59□□□□□ -0.39
CD40-206ENST00000489304 COX8AP10176 69 aa12.59□□□□□ -0.39
CD40-206ENST00000489304 FGF6P10767 208 aa12.59□□□□□ -0.39
CD40-206ENST00000489304 HTN3P15516 51 aa12.59□□□□□ -0.39
CD40-206ENST00000489304 SLC25A34Q6PIV7 304 aa12.59□□□□□ -0.39
CD40-206ENST00000489304 NFE4Q86UQ8 179 aa12.59□□□□□ -0.39
CD40-206ENST00000489304 C11orf86A6NJI1 115 aa12.58□□□□□ -0.4
CD40-206ENST00000489304 Q6ZUT4 128 aa12.58□□□□□ -0.4
CD40-206ENST00000489304 DNAH9Q9NYC9 4486 aa12.58□□□□□ -0.4
CD40-206ENST00000489304 TRAV26-1A0A087WT03 109 aa12.57□□□□□ -0.4
CD40-206ENST00000489304 A0A0J9YY99 117 aa12.57□□□□□ -0.4
CD40-206ENST00000489304 DEFA6Q01524 100 aa12.57□□□□□ -0.4
CD40-206ENST00000489304 DGAT2L7PQ6IED9 249 aa12.57□□□□□ -0.4
CD40-206ENST00000489304 UBE2L6O14933 153 aa12.57□□□□□ -0.4
CD40-206ENST00000489304 IGKV2D-26A0A0A0MRZ7 120 aa12.55□□□□□ -0.4
CD40-206ENST00000489304 TCTAP57738 103 aa12.55□□□□□ -0.4
CD40-206ENST00000489304 NANOS2P60321 138 aaKnown RBP12.55□□□□□ -0.4
CD40-206ENST00000489304 RNASE13Q5GAN3 156 aaKnown RBP12.55□□□□□ -0.4
CD40-206ENST00000489304 A0A0J9YXV3 536 aa12.54□□□□□ -0.4
CD40-206ENST00000489304 HNRNPA3P51991 378 aaKnown RBP12.54□□□□□ -0.4
CD40-206ENST00000489304 Q6ZTC4 211 aa12.54□□□□□ -0.4
CD40-206ENST00000489304 BOD1L2Q8IYS8 172 aa12.54□□□□□ -0.4
CD40-206ENST00000489304 CHAC1Q9BUX1 264 aa12.54□□□□□ -0.4
CD40-206ENST00000489304 DLEU1O43261 78 aa12.54□□□□□ -0.4
CD40-206ENST00000489304 ZNF25P17030 456 aaPredicted RBP12.54□□□□□ -0.4
CD40-206ENST00000489304 NMUP48645 174 aa12.54□□□□□ -0.4
CD40-206ENST00000489304 MRPL23Q16540 153 aaKnown RBP12.54□□□□□ -0.4
CD40-206ENST00000489304 AMMECR1LQ6DCA0 310 aa12.54□□□□□ -0.4
CD40-206ENST00000489304 OR5A1Q8NGJ0 315 aa12.54□□□□□ -0.4
CD40-206ENST00000489304 C2orf88Q9BSF0 95 aa12.54□□□□□ -0.4
CD40-206ENST00000489304 MRPS16Q9Y3D3 137 aaKnown RBP12.54□□□□□ -0.4
CD40-206ENST00000489304 SH2D6Q7Z4S9 175 aa12.53□□□□□ -0.4
CD40-206ENST00000489304 TMEM101Q96IK0 257 aa12.53□□□□□ -0.4
CD40-206ENST00000489304 B9D2Q9BPU9 175 aa12.53□□□□□ -0.4
CD40-206ENST00000489304 CDC42SE2Q9NRR3 84 aa12.53□□□□□ -0.4
CD40-206ENST00000489304 TP73-AS1Q9UF72 201 aa12.53□□□□□ -0.4
CD40-206ENST00000489304 GAGE6Q13070 117 aa12.52□□□□□ -0.41
CD40-206ENST00000489304 PCP2Q8IVA1 136 aa12.52□□□□□ -0.41
CD40-206ENST00000489304 CHCHD5Q9BSY4 110 aa12.52□□□□□ -0.41
CD40-206ENST00000489304 ICOSQ9Y6W8 199 aa12.52□□□□□ -0.41
CD40-206ENST00000489304 A0A096LPF7 62 aa12.51□□□□□ -0.41
CD40-206ENST00000489304 E9PLD3 99 aa12.51□□□□□ -0.41
CD40-206ENST00000489304 H3BNG1 76 aa12.51□□□□□ -0.41
CD40-206ENST00000489304 CTAG1AP78358 180 aa12.51□□□□□ -0.41
CD40-206ENST00000489304 C11orf45Q8TAV5 145 aa12.51□□□□□ -0.41
CD40-206ENST00000489304 TINCRA0A1B0GVN0 87 aa12.51□□□□□ -0.41
CD40-206ENST00000489304 ZNF22P17026 224 aaPredicted RBP12.51□□□□□ -0.41
CD40-206ENST00000489304 UBE2D1P51668 147 aa12.51□□□□□ -0.41
CD40-206ENST00000489304 TMEM170BQ5T4T1 132 aa12.51□□□□□ -0.41
CD40-206ENST00000489304 HERVK_113P61574 105 aa12.5□□□□□ -0.41
CD40-206ENST00000489304 FAM19A3Q7Z5A8 133 aa12.5□□□□□ -0.41
CD40-206ENST00000489304 C2orf91Q6ZV80 131 aa12.48□□□□□ -0.41
CD40-206ENST00000489304 TMEM223A0PJW6 202 aa12.48□□□□□ -0.41
CD40-206ENST00000489304 SIVA1O15304 175 aa12.48□□□□□ -0.41
CD40-206ENST00000489304 TIRAPP58753 221 aa12.48□□□□□ -0.41
CD40-206ENST00000489304 TTTY13Q9BZ97 58 aa12.47□□□□□ -0.41
CD40-206ENST00000489304 IGLV4-60A0A075B6I1 120 aa12.46□□□□□ -0.41
CD40-206ENST00000489304 TRAV8-6A0A0B4J262 113 aa12.46□□□□□ -0.41
CD40-206ENST00000489304 A0A1B0GUV1 79 aa12.46□□□□□ -0.41
CD40-206ENST00000489304 M0R143 59 aa12.45□□□□□ -0.42
CD40-206ENST00000489304 MAPKAPK5-AS1Q8N8E1 139 aa12.45□□□□□ -0.42
CD40-206ENST00000489304 SNHG12Q9BXW3 62 aa12.45□□□□□ -0.42
CD40-206ENST00000489304 IGLV5-45A0A087WSX0 123 aa12.45□□□□□ -0.42
CD40-206ENST00000489304 SEC11AP67812 179 aa12.45□□□□□ -0.42
CD40-206ENST00000489304 LINC00242Q5T6M2 205 aa12.45□□□□□ -0.42
CD40-206ENST00000489304 GEMIN7Q9H840 131 aaKnown RBP12.45□□□□□ -0.42
CD40-206ENST00000489304 DEFB131BA0A096LNP1 70 aa12.44□□□□□ -0.42
CD40-206ENST00000489304 LELP1Q5T871 98 aa12.44□□□□□ -0.42
CD40-206ENST00000489304 EREGO14944 169 aa12.43□□□□□ -0.42
CD40-206ENST00000489304 RBX1P62877 108 aa12.43□□□□□ -0.42
CD40-206ENST00000489304 HERVK_113P63121 156 aa12.43□□□□□ -0.42
CD40-206ENST00000489304 HIGD1BQ9P298 99 aa12.43□□□□□ -0.42
CD40-206ENST00000489304 TRAV13-1A0A0B4J241 112 aa12.42□□□□□ -0.42
CD40-206ENST00000489304 TMEM262E9PQX1 116 aa12.42□□□□□ -0.42
CD40-206ENST00000489304 LEPROTO15243 131 aa12.42□□□□□ -0.42
CD40-206ENST00000489304 MPV17L2Q567V2 206 aa12.42□□□□□ -0.42
CD40-206ENST00000489304 LINC00469Q8N7U9 141 aa12.42□□□□□ -0.42
CD40-206ENST00000489304 MYMXA0A1B0GTQ4 84 aa12.42□□□□□ -0.42
CD40-206ENST00000489304 COX6A2Q02221 97 aa12.42□□□□□ -0.42
CD40-206ENST00000489304 LYPD5Q6UWN5 251 aa12.42□□□□□ -0.42
CD40-206ENST00000489304 CDKN2A-AS1Q9UH64 79 aa12.41□□□□□ -0.42
CD40-206ENST00000489304 TRAV10A0A0B4J240 114 aa12.4□□□□□ -0.42
CD40-206ENST00000489304 J3QQQ9 107 aa12.4□□□□□ -0.42
CD40-206ENST00000489304 TSPEAR-AS2P59090 65 aa12.4□□□□□ -0.42
CD40-206ENST00000489304 LBHQ53QV2 105 aaPredicted RBP12.4□□□□□ -0.42
CD40-206ENST00000489304 PLEKHB2Q96CS7 222 aa12.4□□□□□ -0.42
CD40-206ENST00000489304 H3BRM9 83 aa12.4□□□□□ -0.43
CD40-206ENST00000489304 ZNF815PA8K554 130 aa12.39□□□□□ -0.43
CD40-206ENST00000489304 IGHV1-58A0A0C4DH39 117 aa12.38□□□□□ -0.43
CD40-206ENST00000489304 NHLRC4P0CG21 123 aaPredicted RBP12.38□□□□□ -0.43
CD40-206ENST00000489304 HINT1P49773 126 aaPredicted RBP12.38□□□□□ -0.43
CD40-206ENST00000489304 COL7A1Q02388 2944 aa12.38□□□□□ -0.43
CD40-206ENST00000489304 PRKDCP78527 4128 aaKnown RBP12.37□□□□□ -0.43
CD40-206ENST00000489304 IGHV3-30-3P0DP02 117 aa12.37□□□□□ -0.43
CD40-206ENST00000489304 LGALS3P17931 250 aaKnown RBP12.37□□□□□ -0.43
CD40-206ENST00000489304 IGHV3-64A0A075B6Q5 118 aa12.37□□□□□ -0.43
CD40-206ENST00000489304 TRAV8-3A0A0A6YYJ7 113 aa12.37□□□□□ -0.43
CD40-206ENST00000489304 SPINK8P0C7L1 97 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms