RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 NAA60Q9H7X0 242 aa-2.3□□□□□ -2.78
CBWD1-216ENST00000489272 FAM92AA1XBS5 289 aa-2.31□□□□□ -2.78
CBWD1-216ENST00000489272 TMED4Q7Z7H5 227 aa-2.31□□□□□ -2.78
CBWD1-216ENST00000489272 ARFGEF1Q9Y6D6 1849 aa-2.31□□□□□ -2.78
CBWD1-216ENST00000489272 MT2AP02795 61 aa-2.32□□□□□ -2.78
CBWD1-216ENST00000489272 MT1EP04732 61 aa-2.32□□□□□ -2.78
CBWD1-216ENST00000489272 UBE2D3P61077 147 aa-2.32□□□□□ -2.78
CBWD1-216ENST00000489272 UBE2D2P62837 147 aa-2.32□□□□□ -2.78
CBWD1-216ENST00000489272 S4R3F8 94 aa-2.32□□□□□ -2.78
CBWD1-216ENST00000489272 COL14A1Q05707 1796 aaKnown RBP-2.32□□□□□ -2.78
CBWD1-216ENST00000489272 ZCCHC11Q5TAX3 1644 aaKnown RBP-2.32□□□□□ -2.78
CBWD1-216ENST00000489272 MAGI1Q96QZ7 1491 aaPredicted RBP-2.33□□□□□ -2.78
CBWD1-216ENST00000489272 J3QLW9 94 aa-2.33□□□□□ -2.78
CBWD1-216ENST00000489272 POLR2HP52434 150 aaKnown RBP-2.33□□□□□ -2.78
CBWD1-216ENST00000489272 CCL18P55774 89 aa-2.33□□□□□ -2.78
CBWD1-216ENST00000489272 PSPHP78330 225 aa-2.33□□□□□ -2.78
CBWD1-216ENST00000489272 DCUN1D2Q6PH85 259 aa-2.33□□□□□ -2.78
CBWD1-216ENST00000489272 SMIM4Q8WVI0 70 aa-2.33□□□□□ -2.78
CBWD1-216ENST00000489272 CCDC32Q9BV29 185 aa-2.33□□□□□ -2.78
CBWD1-216ENST00000489272 NDUFA12Q9UI09 145 aa-2.33□□□□□ -2.78
CBWD1-216ENST00000489272 SPTBN5Q9NRC6 3674 aaKnown RBP-2.33□□□□□ -2.78
CBWD1-216ENST00000489272 LRRC37A2A6NM11 1700 aa-2.34□□□□□ -2.78
CBWD1-216ENST00000489272 FAM107AO95990 144 aa-2.34□□□□□ -2.78
CBWD1-216ENST00000489272 C9orf116Q5BN46 136 aaPredicted RBP-2.34□□□□□ -2.78
CBWD1-216ENST00000489272 THEM6Q8WUY1 208 aa-2.34□□□□□ -2.78
CBWD1-216ENST00000489272 C10orf82Q8WW14 230 aa-2.34□□□□□ -2.78
CBWD1-216ENST00000489272 MT1LQ93083 61 aa-2.34□□□□□ -2.78
CBWD1-216ENST00000489272 SBF2Q86WG5 1849 aa-2.34□□□□□ -2.78
CBWD1-216ENST00000489272 LRRC37A3O60309 1634 aa-2.35□□□□□ -2.78
CBWD1-216ENST00000489272 BORCS7-ASMTA0A0B4J1R7 106 aa-2.35□□□□□ -2.79
CBWD1-216ENST00000489272 E7EQ34 232 aa-2.35□□□□□ -2.79
CBWD1-216ENST00000489272 PIRTP0C851 137 aa-2.35□□□□□ -2.79
CBWD1-216ENST00000489272 TMEM78Q5T7P6 136 aa-2.35□□□□□ -2.79
CBWD1-216ENST00000489272 LINC01545Q5VT33 79 aa-2.35□□□□□ -2.79
CBWD1-216ENST00000489272 USMG5Q96IX5 58 aa-2.35□□□□□ -2.79
CBWD1-216ENST00000489272 TRAPPC2LQ9UL33 140 aa-2.35□□□□□ -2.79
CBWD1-216ENST00000489272 FMN2Q9NZ56 1722 aa-2.35□□□□□ -2.79
CBWD1-216ENST00000489272 PAPPA2Q9BXP8 1791 aa-2.36□□□□□ -2.79
CBWD1-216ENST00000489272 HMGXB3Q12766 1538 aa-2.36□□□□□ -2.79
CBWD1-216ENST00000489272 YPEL1O60688 119 aa-2.36□□□□□ -2.79
CBWD1-216ENST00000489272 PITX3O75364 302 aa-2.36□□□□□ -2.79
CBWD1-216ENST00000489272 RBP4P02753 201 aa-2.36□□□□□ -2.79
CBWD1-216ENST00000489272 Q6JHZ5 121 aa-2.36□□□□□ -2.79
CBWD1-216ENST00000489272 A0A1W2PRE2 83 aa-2.37□□□□□ -2.79
CBWD1-216ENST00000489272 E2F6O75461 281 aa-2.37□□□□□ -2.79
CBWD1-216ENST00000489272 HLA-DRB4P13762 266 aa-2.37□□□□□ -2.79
CBWD1-216ENST00000489272 ZNF818PQ6ZRF7 136 aa-2.37□□□□□ -2.79
CBWD1-216ENST00000489272 RPRMQ9NS64 109 aa-2.37□□□□□ -2.79
CBWD1-216ENST00000489272 HLA-DRB4X5D2U9 266 aa-2.37□□□□□ -2.79
CBWD1-216ENST00000489272 POLA1P09884 1462 aaPredicted RBP-2.38□□□□□ -2.79
CBWD1-216ENST00000489272 MUC22E2RYF6 1773 aaPredicted RBP-2.38□□□□□ -2.79
CBWD1-216ENST00000489272 F8VRH5 84 aa-2.38□□□□□ -2.79
CBWD1-216ENST00000489272 M0R135 149 aa-2.38□□□□□ -2.79
CBWD1-216ENST00000489272 SSSCA1O60232 199 aa-2.38□□□□□ -2.79
CBWD1-216ENST00000489272 RPL7P18124 248 aaKnown RBP-2.38□□□□□ -2.79
CBWD1-216ENST00000489272 CCDC115Q96NT0 180 aa-2.38□□□□□ -2.79
CBWD1-216ENST00000489272 MRC1P22897 1456 aa-2.39□□□□□ -2.79
CBWD1-216ENST00000489272 STX12Q86Y82 276 aa-2.39□□□□□ -2.79
CBWD1-216ENST00000489272 BOLA2Q9H3K6 86 aa-2.39□□□□□ -2.79
CBWD1-216ENST00000489272 KIAA0556O60303 1618 aa-2.39□□□□□ -2.79
CBWD1-216ENST00000489272 PXDNQ92626 1479 aa-2.39□□□□□ -2.79
CBWD1-216ENST00000489272 IFNA17P01571 189 aa-2.4□□□□□ -2.79
CBWD1-216ENST00000489272 SERPINB1P30740 379 aa-2.4□□□□□ -2.79
CBWD1-216ENST00000489272 VSTM2AQ8TAG5 236 aa-2.4□□□□□ -2.79
CBWD1-216ENST00000489272 R4GMQ9 66 aa-2.4□□□□□ -2.79
CBWD1-216ENST00000489272 EIF3AQ14152 1382 aaKnown RBP-2.4□□□□□ -2.79
CBWD1-216ENST00000489272 PRUNE2Q8WUY3 3088 aa-2.4□□□□□ -2.79
CBWD1-216ENST00000489272 TRBV7-4A0A0J9YYF1 115 aa-2.41□□□□□ -2.8
CBWD1-216ENST00000489272 PIPP12273 146 aaPredicted RBP-2.41□□□□□ -2.8
CBWD1-216ENST00000489272 KRTAP19-6Q3LI70 58 aa-2.41□□□□□ -2.8
CBWD1-216ENST00000489272 SPANXN1Q5VSR9 72 aa-2.41□□□□□ -2.8
CBWD1-216ENST00000489272 LINC00312Q9Y6C7 94 aa-2.41□□□□□ -2.8
CBWD1-216ENST00000489272 KDM5CP41229 1560 aa-2.41□□□□□ -2.8
CBWD1-216ENST00000489272 TULP4Q9NRJ4 1543 aa-2.42□□□□□ -2.8
CBWD1-216ENST00000489272 CICQ96RK0 1608 aaPredicted RBP-2.42□□□□□ -2.8
CBWD1-216ENST00000489272 A0A087WVE0 104 aa-2.42□□□□□ -2.8
CBWD1-216ENST00000489272 PFDN1O60925 122 aa-2.42□□□□□ -2.8
CBWD1-216ENST00000489272 SMR3BP02814 79 aaPredicted RBP-2.42□□□□□ -2.8
CBWD1-216ENST00000489272 S100A5P33763 92 aa-2.42□□□□□ -2.8
CBWD1-216ENST00000489272 CLLU1Q5K131 121 aa-2.42□□□□□ -2.8
CBWD1-216ENST00000489272 TMEM170BQ5T4T1 132 aa-2.42□□□□□ -2.8
CBWD1-216ENST00000489272 LSM2Q9Y333 95 aaKnown RBP-2.42□□□□□ -2.8
CBWD1-216ENST00000489272 ZFHX4Q86UP3 3567 aa-2.42□□□□□ -2.8
CBWD1-216ENST00000489272 PATJQ8NI35 1801 aa-2.42□□□□□ -2.8
CBWD1-216ENST00000489272 MAP3K1Q13233 1512 aa-2.42□□□□□ -2.8
CBWD1-216ENST00000489272 MYOM3Q5VTT5 1437 aa-2.42□□□□□ -2.8
CBWD1-216ENST00000489272 BCORQ6W2J9 1755 aa-2.43□□□□□ -2.8
CBWD1-216ENST00000489272 CTXND1A0A1B0GTU2 59 aa-2.43□□□□□ -2.8
CBWD1-216ENST00000489272 ARPC5O15511 151 aa-2.43□□□□□ -2.8
CBWD1-216ENST00000489272 SMIM24O75264 130 aa-2.43□□□□□ -2.8
CBWD1-216ENST00000489272 UBE2G1P62253 170 aa-2.43□□□□□ -2.8
CBWD1-216ENST00000489272 COX17Q14061 63 aa-2.43□□□□□ -2.8
CBWD1-216ENST00000489272 AKAP14Q86UN6 197 aa-2.43□□□□□ -2.8
CBWD1-216ENST00000489272 Q8N8P6 123 aa-2.43□□□□□ -2.8
CBWD1-216ENST00000489272 SELENOSQ9BQE4 189 aa-2.43□□□□□ -2.8
CBWD1-216ENST00000489272 ERCC6Q03468 1493 aa-2.44□□□□□ -2.8
CBWD1-216ENST00000489272 HEPN1Q6WQI6 88 aa-2.44□□□□□ -2.8
CBWD1-216ENST00000489272 MNS1Q8NEH6 495 aa-2.44□□□□□ -2.8
CBWD1-216ENST00000489272 OR9Q1Q8NGQ5 310 aa-2.44□□□□□ -2.8
CBWD1-216ENST00000489272 FREM2Q5SZK8 3169 aa-2.44□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms