RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 CDPF1Q6NVV7 123 aa6.95□□□□□ -1.3
USP11-211ENST00000489111 Q6ZUT4 128 aa6.95□□□□□ -1.3
USP11-211ENST00000489111 C15orf53Q8NAA6 179 aa6.95□□□□□ -1.3
USP11-211ENST00000489111 OPRPNQ99935 248 aaPredicted RBP6.95□□□□□ -1.3
USP11-211ENST00000489111 C2orf88Q9BSF0 95 aa6.95□□□□□ -1.3
USP11-211ENST00000489111 CST9LQ9H4G1 147 aa6.95□□□□□ -1.3
USP11-211ENST00000489111 F8VRH5 84 aa6.94□□□□□ -1.3
USP11-211ENST00000489111 IGKCP01834 107 aa6.94□□□□□ -1.3
USP11-211ENST00000489111 TIRAPP58753 221 aa6.94□□□□□ -1.3
USP11-211ENST00000489111 LELP1Q5T871 98 aa6.94□□□□□ -1.3
USP11-211ENST00000489111 MRPL35Q9NZE8 188 aaKnown RBP6.94□□□□□ -1.3
USP11-211ENST00000489111 CSDC2Q9Y534 153 aaKnown RBP6.94□□□□□ -1.3
USP11-211ENST00000489111 TRAV9-2A0A087WT02 112 aa6.93□□□□□ -1.3
USP11-211ENST00000489111 TRAV8-6A0A0B4J262 113 aa6.93□□□□□ -1.3
USP11-211ENST00000489111 TMEM262E9PQX1 116 aa6.93□□□□□ -1.3
USP11-211ENST00000489111 RNASE13Q5GAN3 156 aaKnown RBP6.93□□□□□ -1.3
USP11-211ENST00000489111 ZC2HC1BQ5TFG8 222 aa6.93□□□□□ -1.3
USP11-211ENST00000489111 PAM16Q9Y3D7 125 aa6.93□□□□□ -1.3
USP11-211ENST00000489111 IGLL5B9A064 214 aa6.92□□□□□ -1.3
USP11-211ENST00000489111 LYPD5Q6UWN5 251 aa6.92□□□□□ -1.3
USP11-211ENST00000489111 ZNF664Q8N3J9 261 aa6.92□□□□□ -1.3
USP11-211ENST00000489111 AMELXQ99217 191 aa6.92□□□□□ -1.3
USP11-211ENST00000489111 hDV102S1A0JD36 115 aa6.91□□□□□ -1.3
USP11-211ENST00000489111 RBX1P62877 108 aa6.91□□□□□ -1.3
USP11-211ENST00000489111 SPATA45Q537H7 98 aa6.91□□□□□ -1.3
USP11-211ENST00000489111 CHAC1Q9BUX1 264 aa6.91□□□□□ -1.3
USP11-211ENST00000489111 IGLV4-69A0A075B6H9 119 aa6.9□□□□□ -1.3
USP11-211ENST00000489111 TSTD3H0UI37 97 aa6.9□□□□□ -1.3
USP11-211ENST00000489111 MAJINQ3KP22 176 aa6.9□□□□□ -1.3
USP11-211ENST00000489111 MPV17L2Q567V2 206 aa6.9□□□□□ -1.3
USP11-211ENST00000489111 FAM104AQ969W3 186 aa6.9□□□□□ -1.3
USP11-211ENST00000489111 CDC42SE2Q9NRR3 84 aa6.9□□□□□ -1.3
USP11-211ENST00000489111 IGLV4-60A0A075B6I1 120 aa6.89□□□□□ -1.31
USP11-211ENST00000489111 TRAV13-1A0A0B4J241 112 aa6.89□□□□□ -1.31
USP11-211ENST00000489111 A0A0J9YXV3 536 aa6.89□□□□□ -1.31
USP11-211ENST00000489111 A0A1B0GUV1 79 aa6.89□□□□□ -1.31
USP11-211ENST00000489111 NUPR2A6NF83 97 aa6.89□□□□□ -1.31
USP11-211ENST00000489111 C11orf86A6NJI1 115 aa6.89□□□□□ -1.31
USP11-211ENST00000489111 IGLC3P0DOY3 106 aa6.89□□□□□ -1.31
USP11-211ENST00000489111 HERVK_113P61574 105 aa6.89□□□□□ -1.31
USP11-211ENST00000489111 TMEM170BQ5T4T1 132 aa6.89□□□□□ -1.31
USP11-211ENST00000489111 NFE4Q86UQ8 179 aa6.89□□□□□ -1.31
USP11-211ENST00000489111 GEMIN7Q9H840 131 aaKnown RBP6.89□□□□□ -1.31
USP11-211ENST00000489111 STAB2Q8WWQ8 2551 aa6.88□□□□□ -1.31
USP11-211ENST00000489111 IGKV3OR2-268A0A0C4DH90 116 aa6.88□□□□□ -1.31
USP11-211ENST00000489111 TINCRA0A1B0GVN0 87 aa6.88□□□□□ -1.31
USP11-211ENST00000489111 ANGP03950 147 aaKnown RBP6.88□□□□□ -1.31
USP11-211ENST00000489111 UBE2D1P51668 147 aa6.88□□□□□ -1.31
USP11-211ENST00000489111 CCL18P55774 89 aa6.88□□□□□ -1.31
USP11-211ENST00000489111 SEC11AP67812 179 aa6.88□□□□□ -1.31
USP11-211ENST00000489111 ESRGQ1W209 222 aa6.88□□□□□ -1.31
USP11-211ENST00000489111 STPG4Q8N801 248 aa6.88□□□□□ -1.31
USP11-211ENST00000489111 PRO1933Q9H354 126 aa6.88□□□□□ -1.31
USP11-211ENST00000489111 KLK5Q9Y337 293 aaPredicted RBP6.88□□□□□ -1.31
USP11-211ENST00000489111 TCTAP57738 103 aa6.87□□□□□ -1.31
USP11-211ENST00000489111 WFDC10BQ8IUB3 73 aa6.87□□□□□ -1.31
USP11-211ENST00000489111 LINC00469Q8N7U9 141 aa6.87□□□□□ -1.31
USP11-211ENST00000489111 H3BRM9 83 aa6.86□□□□□ -1.31
USP11-211ENST00000489111 ZNF22P17026 224 aaPredicted RBP6.86□□□□□ -1.31
USP11-211ENST00000489111 NMUP48645 174 aa6.86□□□□□ -1.31
USP11-211ENST00000489111 HERVK_113P63121 156 aa6.86□□□□□ -1.31
USP11-211ENST00000489111 ANKRD39Q53RE8 183 aa6.86□□□□□ -1.31
USP11-211ENST00000489111 CLPSL2Q6UWE3 100 aa6.86□□□□□ -1.31
USP11-211ENST00000489111 MRPS16Q9Y3D3 137 aaKnown RBP6.86□□□□□ -1.31
USP11-211ENST00000489111 FBN3Q75N90 2809 aa6.85□□□□□ -1.31
USP11-211ENST00000489111 PCP4L1A6NKN8 68 aa6.85□□□□□ -1.31
USP11-211ENST00000489111 IGHV3-30P01768 117 aa6.85□□□□□ -1.31
USP11-211ENST00000489111 IGHV3-33P01772 117 aa6.85□□□□□ -1.31
USP11-211ENST00000489111 CRPP02741 224 aa6.85□□□□□ -1.31
USP11-211ENST00000489111 IGHV3-30-3P0DP02 117 aa6.85□□□□□ -1.31
USP11-211ENST00000489111 IGHV3-30-5P0DP03 117 aa6.85□□□□□ -1.31
USP11-211ENST00000489111 SS18Q15532 418 aa6.85□□□□□ -1.31
USP11-211ENST00000489111 LINC00269Q8N2A0 174 aa6.85□□□□□ -1.31
USP11-211ENST00000489111 Q8N3U1 123 aa6.85□□□□□ -1.31
USP11-211ENST00000489111 LINC00959A0A1B0GUT2 108 aa6.84□□□□□ -1.31
USP11-211ENST00000489111 REG3AQ06141 175 aa6.84□□□□□ -1.31
USP11-211ENST00000489111 LINC00242Q5T6M2 205 aa6.84□□□□□ -1.31
USP11-211ENST00000489111 FAM19A3Q7Z5A8 133 aa6.84□□□□□ -1.31
USP11-211ENST00000489111 UBE2DNLQ8IWF7 75 aa6.84□□□□□ -1.31
USP11-211ENST00000489111 C14orf144Q96I85 54 aa6.84□□□□□ -1.31
USP11-211ENST00000489111 UQCR10Q9UDW1 63 aa6.84□□□□□ -1.31
USP11-211ENST00000489111 KLK12Q9UKR0 248 aa6.84□□□□□ -1.31
USP11-211ENST00000489111 LINC00588Q9Y4M8 146 aa6.84□□□□□ -1.31
USP11-211ENST00000489111 HUWE1Q7Z6Z7 4374 aaKnown RBP6.83□□□□□ -1.32
USP11-211ENST00000489111 IGLV5-45A0A087WSX0 123 aa6.83□□□□□ -1.32
USP11-211ENST00000489111 TMEM223A0PJW6 202 aa6.83□□□□□ -1.32
USP11-211ENST00000489111 E9PLD3 99 aa6.83□□□□□ -1.32
USP11-211ENST00000489111 CCL25O15444 150 aa6.83□□□□□ -1.32
USP11-211ENST00000489111 LINC01556Q5JQF7 62 aa6.83□□□□□ -1.32
USP11-211ENST00000489111 SLC25A34Q6PIV7 304 aa6.83□□□□□ -1.32
USP11-211ENST00000489111 CDKN2A-AS1Q9UH64 79 aa6.83□□□□□ -1.32
USP11-211ENST00000489111 IGHV3-64A0A075B6Q5 118 aa6.82□□□□□ -1.32
USP11-211ENST00000489111 SIVA1O15304 175 aa6.82□□□□□ -1.32
USP11-211ENST00000489111 COX8AP10176 69 aa6.82□□□□□ -1.32
USP11-211ENST00000489111 XCL1P47992 114 aa6.82□□□□□ -1.32
USP11-211ENST00000489111 UBE2WQ96B02 151 aa6.82□□□□□ -1.32
USP11-211ENST00000489111 MIEN1Q9BRT3 115 aa6.82□□□□□ -1.32
USP11-211ENST00000489111 APLNQ9ULZ1 77 aa6.82□□□□□ -1.32
USP11-211ENST00000489111 COL7A1Q02388 2944 aa6.82□□□□□ -1.32
USP11-211ENST00000489111 IGKV2D-26A0A0A0MRZ7 120 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms