RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 SMR3AQ99954 134 aa4.75□□□□□ -1.65
PDCD4-209ENST00000489049 TM2D2Q9BX73 214 aa4.75□□□□□ -1.65
PDCD4-209ENST00000489049 GTSF1LQ9H1H1 148 aa4.75□□□□□ -1.65
PDCD4-209ENST00000489049 H3BRM9 83 aa4.74□□□□□ -1.65
PDCD4-209ENST00000489049 K7EQD1 137 aa4.74□□□□□ -1.65
PDCD4-209ENST00000489049 PRYO14603 147 aa4.74□□□□□ -1.65
PDCD4-209ENST00000489049 P0DMU3 169 aa4.74□□□□□ -1.65
PDCD4-209ENST00000489049 FAM231AP0DMU4 169 aa4.74□□□□□ -1.65
PDCD4-209ENST00000489049 FAM231CP0DMU5 169 aa4.74□□□□□ -1.65
PDCD4-209ENST00000489049 Q8N9P0 234 aaPredicted RBP4.74□□□□□ -1.65
PDCD4-209ENST00000489049 AMELXQ99217 191 aa4.74□□□□□ -1.65
PDCD4-209ENST00000489049 MRPL16Q9NX20 251 aaKnown RBP4.74□□□□□ -1.65
PDCD4-209ENST00000489049 NOTCH1P46531 2555 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 HIVEP1P15822 2718 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 IGLV4-69A0A075B6H9 119 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 TRBV25-1A0A075B6N4 114 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 TRGV2A0A075B6R0 118 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 TEX48A0A1B0GUV7 120 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 TINCRA0A1B0GVN0 87 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 LYRM9A8MSI8 78 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 KRTAP10-3P60369 221 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 RPL39P62891 51 aaKnown RBP4.73□□□□□ -1.65
PDCD4-209ENST00000489049 NEGR1Q7Z3B1 354 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 PCP2Q8IVA1 136 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 LINC00612Q8N6U2 182 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 LINC00469Q8N7U9 141 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 PRADC1Q9BSG0 188 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 STAB1Q9NY15 2570 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 AKAP9Q99996 3911 aa4.73□□□□□ -1.65
PDCD4-209ENST00000489049 SVEP1Q4LDE5 3571 aa4.72□□□□□ -1.65
PDCD4-209ENST00000489049 IGLV4-3A0A075B6K6 122 aa4.72□□□□□ -1.65
PDCD4-209ENST00000489049 IGHV3OR16-12A0A075B7B8 117 aa4.72□□□□□ -1.65
PDCD4-209ENST00000489049 LEPROTO15243 131 aa4.72□□□□□ -1.65
PDCD4-209ENST00000489049 SMIM13P0DJ93 91 aa4.72□□□□□ -1.65
PDCD4-209ENST00000489049 ZNF25P17030 456 aaPredicted RBP4.72□□□□□ -1.65
PDCD4-209ENST00000489049 RPL35AP18077 110 aaKnown RBP4.72□□□□□ -1.65
PDCD4-209ENST00000489049 UBE2D3P61077 147 aa4.72□□□□□ -1.65
PDCD4-209ENST00000489049 UBE2D2P62837 147 aa4.72□□□□□ -1.65
PDCD4-209ENST00000489049 Q6ZVH6 145 aa4.72□□□□□ -1.65
PDCD4-209ENST00000489049 FAM19A3Q7Z5A8 133 aa4.72□□□□□ -1.65
PDCD4-209ENST00000489049 CHAC1Q9BUX1 264 aa4.72□□□□□ -1.65
PDCD4-209ENST00000489049 NOP10Q9NPE3 64 aaKnown RBP4.72□□□□□ -1.65
PDCD4-209ENST00000489049 CSMD2Q7Z408 3487 aa4.72□□□□□ -1.65
PDCD4-209ENST00000489049 CSMD1Q96PZ7 3565 aa4.71□□□□□ -1.65
PDCD4-209ENST00000489049 IGKV2D-26A0A0A0MRZ7 120 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 IGHV3-73A0A0B4J1V6 119 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 TRAV8-6A0A0B4J262 113 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 TMEM223A0PJW6 202 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 GAGE10A6NGK3 116 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 ZNF815PA8K554 130 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 TAX1BP3O14907 124 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 LGALS3P17931 250 aaKnown RBP4.71□□□□□ -1.66
PDCD4-209ENST00000489049 UBE2V1Q13404 147 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 TMEM170BQ5T4T1 132 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 Q6ZTI0 123 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 GTF2H5Q6ZYL4 71 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 SH2D6Q7Z4S9 175 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 CEND1Q8N111 149 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 ZNRF2Q8NHG8 242 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 TMEM101Q96IK0 257 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 HIST1H4GQ99525 98 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 CHCHD7Q9BUK0 85 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 SPANXB1Q9NS25 103 aaPredicted RBP4.71□□□□□ -1.66
PDCD4-209ENST00000489049 TP73-AS1Q9UF72 201 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 UBE2D4Q9Y2X8 147 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 JMJD1CQ15652 2540 aa4.71□□□□□ -1.66
PDCD4-209ENST00000489049 ANK3Q12955 4377 aaKnown RBP4.7□□□□□ -1.66
PDCD4-209ENST00000489049 IGLV5-45A0A087WSX0 123 aa4.7□□□□□ -1.66
PDCD4-209ENST00000489049 TRGV4A0A0C4DH28 118 aa4.7□□□□□ -1.66
PDCD4-209ENST00000489049 PLAC8L1A1L4L8 177 aa4.7□□□□□ -1.66
PDCD4-209ENST00000489049 J3QQQ9 107 aa4.7□□□□□ -1.66
PDCD4-209ENST00000489049 CCL25O15444 150 aa4.7□□□□□ -1.66
PDCD4-209ENST00000489049 MIFP14174 115 aa4.7□□□□□ -1.66
PDCD4-209ENST00000489049 SCGB1D4Q6XE38 83 aa4.7□□□□□ -1.66
PDCD4-209ENST00000489049 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.7□□□□□ -1.66
PDCD4-209ENST00000489049 SLC25A29Q8N8R3 303 aa4.7□□□□□ -1.66
PDCD4-209ENST00000489049 COPS9Q8WXC6 57 aa4.7□□□□□ -1.66
PDCD4-209ENST00000489049 RNF183Q96D59 192 aa4.7□□□□□ -1.66
PDCD4-209ENST00000489049 ZNF479Q96JC4 524 aa4.7□□□□□ -1.66
PDCD4-209ENST00000489049 TMEM243Q9BU79 118 aa4.7□□□□□ -1.66
PDCD4-209ENST00000489049 GEMIN7Q9H840 131 aaKnown RBP4.7□□□□□ -1.66
PDCD4-209ENST00000489049 A0A1B0GWB2 263 aa4.69□□□□□ -1.66
PDCD4-209ENST00000489049 A8MZ25 164 aa4.69□□□□□ -1.66
PDCD4-209ENST00000489049 TIMM17BO60830 172 aa4.69□□□□□ -1.66
PDCD4-209ENST00000489049 GAGE7O76087 117 aa4.69□□□□□ -1.66
PDCD4-209ENST00000489049 GAGE12FP0CL80 117 aa4.69□□□□□ -1.66
PDCD4-209ENST00000489049 GAGE12GP0CL81 117 aa4.69□□□□□ -1.66
PDCD4-209ENST00000489049 GAGE12IP0CL82 117 aa4.69□□□□□ -1.66
PDCD4-209ENST00000489049 ZNF22P17026 224 aaPredicted RBP4.69□□□□□ -1.66
PDCD4-209ENST00000489049 HERVK_113P63121 156 aa4.69□□□□□ -1.66
PDCD4-209ENST00000489049 VAMP3Q15836 100 aa4.69□□□□□ -1.66
PDCD4-209ENST00000489049 OR5A1Q8NGJ0 315 aa4.69□□□□□ -1.66
PDCD4-209ENST00000489049 PPDPFQ9H3Y8 114 aa4.69□□□□□ -1.66
PDCD4-209ENST00000489049 PRO0255Q9UI72 69 aa4.69□□□□□ -1.66
PDCD4-209ENST00000489049 NOTCH3Q9UM47 2321 aa4.69□□□□□ -1.66
PDCD4-209ENST00000489049 IGHV1-58A0A0C4DH39 117 aa4.68□□□□□ -1.66
PDCD4-209ENST00000489049 A0A0J9YXV3 536 aa4.68□□□□□ -1.66
PDCD4-209ENST00000489049 A0A0J9YXY3 114 aa4.68□□□□□ -1.66
PDCD4-209ENST00000489049 TMEM238C9JI98 176 aa4.68□□□□□ -1.66
PDCD4-209ENST00000489049 UBE2L6O14933 153 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms