RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 DEFB104AQ8WTQ1 72 aa7.68□□□□□ -1.18
USP11-210ENST00000489030 TMEM18Q96B42 140 aa7.68□□□□□ -1.18
USP11-210ENST00000489030 TMEM243Q9BU79 118 aa7.68□□□□□ -1.18
USP11-210ENST00000489030 UBE2L6O14933 153 aa7.67□□□□□ -1.18
USP11-210ENST00000489030 SMAGPQ0VAQ4 97 aa7.67□□□□□ -1.18
USP11-210ENST00000489030 BAGE3Q86Y29 109 aa7.67□□□□□ -1.18
USP11-210ENST00000489030 CHCHD5Q9BSY4 110 aa7.67□□□□□ -1.18
USP11-210ENST00000489030 LINC01546A6NGU7 62 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 TMEM262E9PQX1 116 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 HIST1H2BKO60814 126 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 HIST1H2BJP06899 126 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 ESDP10768 282 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 HIST1H2BOP23527 126 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 HIST1H2BBP33778 126 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 HIST1H2BDP58876 126 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 HIST1H2BCP62807 126 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 HIST2H2BEQ16778 126 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.66□□□□□ -1.18
USP11-210ENST00000489030 HIST1H2BHQ93079 126 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 CHCHD1Q96BP2 118 aaKnown RBP7.66□□□□□ -1.18
USP11-210ENST00000489030 HIST1H2BNQ99877 126 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 HIST1H2BMQ99879 126 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 CHCHD7Q9BUK0 85 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 AP5S1Q9NUS5 200 aa7.66□□□□□ -1.18
USP11-210ENST00000489030 DNAH8Q96JB1 4490 aa7.65□□□□□ -1.18
USP11-210ENST00000489030 LRCOL1A6NCL2 159 aa7.65□□□□□ -1.18
USP11-210ENST00000489030 LINC01549A6NIU2 74 aa7.65□□□□□ -1.18
USP11-210ENST00000489030 FAM229AH3BQW9 127 aa7.65□□□□□ -1.18
USP11-210ENST00000489030 C20orf203Q8NBC4 194 aa7.65□□□□□ -1.18
USP11-210ENST00000489030 LRP1Q07954 4544 aaKnown RBP7.64□□□□□ -1.19
USP11-210ENST00000489030 TRAV9-2A0A087WT02 112 aa7.64□□□□□ -1.19
USP11-210ENST00000489030 A0A087WX48 190 aa7.64□□□□□ -1.19
USP11-210ENST00000489030 GAGE6Q13070 117 aa7.64□□□□□ -1.19
USP11-210ENST00000489030 RNASEKQ6P5S7 137 aaKnown RBP7.64□□□□□ -1.19
USP11-210ENST00000489030 NFE4Q86UQ8 179 aa7.64□□□□□ -1.19
USP11-210ENST00000489030 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.63□□□□□ -1.19
USP11-210ENST00000489030 IGLV5-52A0A0A0MRZ9 124 aa7.63□□□□□ -1.19
USP11-210ENST00000489030 A0A1B0GUV1 79 aa7.63□□□□□ -1.19
USP11-210ENST00000489030 IGKV2-29A2NJV5 120 aaPredicted RBP7.63□□□□□ -1.19
USP11-210ENST00000489030 K7EP13 123 aa7.63□□□□□ -1.19
USP11-210ENST00000489030 AMMECR1LQ6DCA0 310 aa7.63□□□□□ -1.19
USP11-210ENST00000489030 DGAT2L7PQ6IED9 249 aa7.63□□□□□ -1.19
USP11-210ENST00000489030 URB1-AS1Q96HZ7 61 aa7.63□□□□□ -1.19
USP11-210ENST00000489030 TMEM101Q96IK0 257 aa7.63□□□□□ -1.19
USP11-210ENST00000489030 CYSLTR1Q9Y271 337 aa7.63□□□□□ -1.19
USP11-210ENST00000489030 KRTAP29-1A8MX34 341 aaPredicted RBP7.62□□□□□ -1.19
USP11-210ENST00000489030 HSBP1O75506 76 aa7.62□□□□□ -1.19
USP11-210ENST00000489030 FGF6P10767 208 aa7.62□□□□□ -1.19
USP11-210ENST00000489030 ZNF25P17030 456 aaPredicted RBP7.62□□□□□ -1.19
USP11-210ENST00000489030 NDUFA6P56556 154 aa7.62□□□□□ -1.19
USP11-210ENST00000489030 WFDC2Q14508 124 aa7.62□□□□□ -1.19
USP11-210ENST00000489030 LINC01556Q5JQF7 62 aa7.62□□□□□ -1.19
USP11-210ENST00000489030 C2orf66Q6UXQ4 117 aa7.62□□□□□ -1.19
USP11-210ENST00000489030 TIMM21Q9BVV7 248 aa7.62□□□□□ -1.19
USP11-210ENST00000489030 RPL39P62891 51 aaKnown RBP7.61□□□□□ -1.19
USP11-210ENST00000489030 MRPL52Q86TS9 123 aaKnown RBP7.61□□□□□ -1.19
USP11-210ENST00000489030 TOMM6Q96B49 74 aa7.61□□□□□ -1.19
USP11-210ENST00000489030 CSDC2Q9Y534 153 aaKnown RBP7.61□□□□□ -1.19
USP11-210ENST00000489030 SERF1AO75920 110 aa7.6□□□□□ -1.19
USP11-210ENST00000489030 IGHV3-30P01768 117 aa7.6□□□□□ -1.19
USP11-210ENST00000489030 IGHV3-33P01772 117 aa7.6□□□□□ -1.19
USP11-210ENST00000489030 HBDP02042 147 aa7.6□□□□□ -1.19
USP11-210ENST00000489030 IGHV3-30-3P0DP02 117 aa7.6□□□□□ -1.19
USP11-210ENST00000489030 IGHV3-30-5P0DP03 117 aa7.6□□□□□ -1.19
USP11-210ENST00000489030 RBX1P62877 108 aa7.6□□□□□ -1.19
USP11-210ENST00000489030 MPV17L2Q567V2 206 aa7.6□□□□□ -1.19
USP11-210ENST00000489030 C10orf126Q8N4M7 172 aa7.6□□□□□ -1.19
USP11-210ENST00000489030 SPANXA1Q9NS26 97 aa7.6□□□□□ -1.19
USP11-210ENST00000489030 UBE2D4Q9Y2X8 147 aa7.6□□□□□ -1.19
USP11-210ENST00000489030 PYGO1Q9Y3Y4 419 aa7.6□□□□□ -1.19
USP11-210ENST00000489030 ANGP03950 147 aaKnown RBP7.59□□□□□ -1.19
USP11-210ENST00000489030 S100A6P06703 90 aa7.59□□□□□ -1.19
USP11-210ENST00000489030 NPSP0C0P6 89 aa7.59□□□□□ -1.19
USP11-210ENST00000489030 COA6Q5JTJ3 125 aaKnown RBP7.59□□□□□ -1.19
USP11-210ENST00000489030 ERASQ7Z444 233 aa7.59□□□□□ -1.19
USP11-210ENST00000489030 Q8N814 137 aa7.59□□□□□ -1.19
USP11-210ENST00000489030 Q8N976 141 aa7.59□□□□□ -1.19
USP11-210ENST00000489030 OR5A1Q8NGJ0 315 aa7.59□□□□□ -1.19
USP11-210ENST00000489030 SCGB3A1Q96QR1 104 aa7.59□□□□□ -1.19
USP11-210ENST00000489030 IGLV4-60A0A075B6I1 120 aa7.58□□□□□ -1.2
USP11-210ENST00000489030 NUPR1O60356 82 aa7.58□□□□□ -1.2
USP11-210ENST00000489030 KRTAP10-4P60372 401 aaPredicted RBP7.58□□□□□ -1.2
USP11-210ENST00000489030 PMCHL1Q16048 86 aa7.58□□□□□ -1.2
USP11-210ENST00000489030 PAPPA-AS1Q5QFB9 102 aa7.58□□□□□ -1.2
USP11-210ENST00000489030 LINC00528Q8N1L1 170 aa7.58□□□□□ -1.2
USP11-210ENST00000489030 FAM19A2Q8N3H0 131 aa7.58□□□□□ -1.2
USP11-210ENST00000489030 ZNF664Q8N3J9 261 aa7.58□□□□□ -1.2
USP11-210ENST00000489030 TMEM141Q96I45 108 aa7.58□□□□□ -1.2
USP11-210ENST00000489030 CDC42SE2Q9NRR3 84 aa7.58□□□□□ -1.2
USP11-210ENST00000489030 KLK12Q9UKR0 248 aa7.58□□□□□ -1.2
USP11-210ENST00000489030 IBA57-AS1B1ANH7 110 aa7.57□□□□□ -1.2
USP11-210ENST00000489030 LINC00310P59036 64 aa7.57□□□□□ -1.2
USP11-210ENST00000489030 MRPS36P82909 103 aaKnown RBP7.57□□□□□ -1.2
USP11-210ENST00000489030 Q8N3U1 123 aa7.57□□□□□ -1.2
USP11-210ENST00000489030 NTN5Q8WTR8 489 aaPredicted RBP7.57□□□□□ -1.2
USP11-210ENST00000489030 TIMM17AQ99595 171 aa7.57□□□□□ -1.2
USP11-210ENST00000489030 Q9HAA7 133 aa7.57□□□□□ -1.2
USP11-210ENST00000489030 A0A096LNJ9 63 aa7.56□□□□□ -1.2
USP11-210ENST00000489030 IGIPA6NJ69 53 aa7.56□□□□□ -1.2
USP11-210ENST00000489030 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms