RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 IGHV4-59P01825 116 aa14.19□□□□□ -0.14
HMG20B-213ENST00000488973 B4DSR2 109 aa14.19□□□□□ -0.14
HMG20B-213ENST00000488973 COX7CP15954 63 aa14.19□□□□□ -0.14
HMG20B-213ENST00000488973 ZNF843Q8N446 348 aa14.19□□□□□ -0.14
HMG20B-213ENST00000488973 LST1O00453 97 aa14.18□□□□□ -0.14
HMG20B-213ENST00000488973 A8MTW9 85 aa14.17□□□□□ -0.14
HMG20B-213ENST00000488973 HTN1P15515 57 aa14.17□□□□□ -0.14
HMG20B-213ENST00000488973 DOPEY1Q5JWR5 2465 aa14.17□□□□□ -0.14
HMG20B-213ENST00000488973 USP24Q9UPU5 2620 aa14.17□□□□□ -0.14
HMG20B-213ENST00000488973 A8MZ25 164 aa14.17□□□□□ -0.14
HMG20B-213ENST00000488973 HOXD3P31249 432 aaPredicted RBP14.16□□□□□ -0.14
HMG20B-213ENST00000488973 DEFB112Q30KQ8 113 aa14.16□□□□□ -0.14
HMG20B-213ENST00000488973 KNCNA6PVL3 124 aa14.15□□□□□ -0.14
HMG20B-213ENST00000488973 NPC2P61916 151 aa14.15□□□□□ -0.14
HMG20B-213ENST00000488973 Q6ZSN1 163 aa14.15□□□□□ -0.14
HMG20B-213ENST00000488973 Q6ZSV7 163 aa14.15□□□□□ -0.14
HMG20B-213ENST00000488973 CLEC2BQ92478 149 aa14.15□□□□□ -0.14
HMG20B-213ENST00000488973 Q9UF83 564 aa14.15□□□□□ -0.14
HMG20B-213ENST00000488973 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.15□□□□□ -0.14
HMG20B-213ENST00000488973 IGKV2-29A2NJV5 120 aaPredicted RBP14.15□□□□□ -0.14
HMG20B-213ENST00000488973 ZNF415Q09FC8 603 aa14.15□□□□□ -0.14
HMG20B-213ENST00000488973 ACYP1P07311 99 aa14.14□□□□□ -0.15
HMG20B-213ENST00000488973 TIRAPP58753 221 aa14.14□□□□□ -0.15
HMG20B-213ENST00000488973 LINC00467Q9BRT7 94 aa14.14□□□□□ -0.15
HMG20B-213ENST00000488973 IGLV5-45A0A087WSX0 123 aa14.14□□□□□ -0.15
HMG20B-213ENST00000488973 NDUFA1O15239 70 aa14.14□□□□□ -0.15
HMG20B-213ENST00000488973 DPH3Q96FX2 82 aa14.14□□□□□ -0.15
HMG20B-213ENST00000488973 COL12A1Q99715 3063 aa14.14□□□□□ -0.15
HMG20B-213ENST00000488973 UBE2E2Q96LR5 201 aa14.13□□□□□ -0.15
HMG20B-213ENST00000488973 CSPG4Q6UVK1 2322 aa14.13□□□□□ -0.15
HMG20B-213ENST00000488973 DEFB131AP59861 70 aa14.13□□□□□ -0.15
HMG20B-213ENST00000488973 TMEM258P61165 79 aa14.13□□□□□ -0.15
HMG20B-213ENST00000488973 IGHV3-53P01767 116 aa14.12□□□□□ -0.15
HMG20B-213ENST00000488973 CDKN2A-AS1Q9UH64 79 aa14.12□□□□□ -0.15
HMG20B-213ENST00000488973 RBMY1BA6NDE4 496 aaKnown RBP14.11□□□□□ -0.15
HMG20B-213ENST00000488973 RBMY1EA6NEQ0 496 aaKnown RBP14.11□□□□□ -0.15
HMG20B-213ENST00000488973 RBMY1DP0C7P1 496 aaKnown RBP14.11□□□□□ -0.15
HMG20B-213ENST00000488973 CIRBPQ14011 172 aaKnown RBP14.11□□□□□ -0.15
HMG20B-213ENST00000488973 C4orf26Q17RF5 130 aa14.11□□□□□ -0.15
HMG20B-213ENST00000488973 C2orf48Q96LS8 159 aa14.11□□□□□ -0.15
HMG20B-213ENST00000488973 CRYBG3Q68DQ2 2970 aa14.11□□□□□ -0.15
HMG20B-213ENST00000488973 TRACP01848 142 aa14.1□□□□□ -0.15
HMG20B-213ENST00000488973 Q5XG85 94 aa14.1□□□□□ -0.15
HMG20B-213ENST00000488973 PRM2P04554 102 aa14.1□□□□□ -0.15
HMG20B-213ENST00000488973 DSCR9P59020 149 aa14.1□□□□□ -0.15
HMG20B-213ENST00000488973 CXCL5P42830 114 aa14.09□□□□□ -0.15
HMG20B-213ENST00000488973 HRCT1Q6UXD1 115 aa14.09□□□□□ -0.15
HMG20B-213ENST00000488973 BEAN1Q3B7T3 259 aa14.08□□□□□ -0.16
HMG20B-213ENST00000488973 DAND5Q8N907 189 aa14.08□□□□□ -0.16
HMG20B-213ENST00000488973 C11orf72Q8NBR9 251 aa14.08□□□□□ -0.16
HMG20B-213ENST00000488973 IGHV3-38A0A0C4DH36 116 aa14.07□□□□□ -0.16
HMG20B-213ENST00000488973 LINC00643Q86TS7 51 aa14.07□□□□□ -0.16
HMG20B-213ENST00000488973 USP9XQ93008 2570 aaPredicted RBP14.07□□□□□ -0.16
HMG20B-213ENST00000488973 IGLV5-39A0A0G2JS06 123 aa14.06□□□□□ -0.16
HMG20B-213ENST00000488973 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.06□□□□□ -0.16
HMG20B-213ENST00000488973 LINC00308Q8TCZ7 52 aa14.06□□□□□ -0.16
HMG20B-213ENST00000488973 RS1O15537 224 aa14.06□□□□□ -0.16
HMG20B-213ENST00000488973 DGAT2L7PQ6IED9 249 aa14.06□□□□□ -0.16
HMG20B-213ENST00000488973 MALP21145 153 aa14.05□□□□□ -0.16
HMG20B-213ENST00000488973 PRO0628Q9UI54 55 aa14.05□□□□□ -0.16
HMG20B-213ENST00000488973 MAP1AP78559 2803 aaPredicted RBP14.05□□□□□ -0.16
HMG20B-213ENST00000488973 LINC01356Q8N9X3 169 aa14.05□□□□□ -0.16
HMG20B-213ENST00000488973 COPS9Q8WXC6 57 aa14.05□□□□□ -0.16
HMG20B-213ENST00000488973 ZNF702PQ9H963 129 aa14.05□□□□□ -0.16
HMG20B-213ENST00000488973 COX6A2Q02221 97 aa14.04□□□□□ -0.16
HMG20B-213ENST00000488973 FLNCQ14315 2725 aa14.04□□□□□ -0.16
HMG20B-213ENST00000488973 IGHV3OR16-12A0A075B7B8 117 aa14.04□□□□□ -0.16
HMG20B-213ENST00000488973 SLURP1P55000 103 aa14.04□□□□□ -0.16
HMG20B-213ENST00000488973 FAM19A3Q7Z5A8 133 aa14.04□□□□□ -0.16
HMG20B-213ENST00000488973 C5orf38Q86SI9 138 aa14.04□□□□□ -0.16
HMG20B-213ENST00000488973 Q9H8V8 135 aa14.04□□□□□ -0.16
HMG20B-213ENST00000488973 CELSR2Q9HCU4 2923 aa14.04□□□□□ -0.16
HMG20B-213ENST00000488973 ATOX1O00244 68 aa14.03□□□□□ -0.16
HMG20B-213ENST00000488973 J3QLI3 93 aa14.03□□□□□ -0.16
HMG20B-213ENST00000488973 COX7A2LO14548 114 aa14.03□□□□□ -0.16
HMG20B-213ENST00000488973 SPG11Q96JI7 2443 aa14.03□□□□□ -0.16
HMG20B-213ENST00000488973 LINC00242Q5T6M2 205 aa14.02□□□□□ -0.16
HMG20B-213ENST00000488973 ZNF462Q96JM2 2506 aa14.02□□□□□ -0.16
HMG20B-213ENST00000488973 hADV29S1A0JD25 119 aa14.02□□□□□ -0.17
HMG20B-213ENST00000488973 OXTP01178 125 aa14.01□□□□□ -0.17
HMG20B-213ENST00000488973 INSP01308 110 aa14.01□□□□□ -0.17
HMG20B-213ENST00000488973 MAP6D1Q9H9H5 199 aa14.01□□□□□ -0.17
HMG20B-213ENST00000488973 HIST1H4AP62805 103 aaKnown RBP14.01□□□□□ -0.17
HMG20B-213ENST00000488973 ZFYVE26Q68DK2 2539 aa14□□□□□ -0.17
HMG20B-213ENST00000488973 SDIM1Q6ZPB5 146 aa14□□□□□ -0.17
HMG20B-213ENST00000488973 PEMTQ9UBM1 199 aa14□□□□□ -0.17
HMG20B-213ENST00000488973 DEFB136Q30KP8 78 aa14□□□□□ -0.17
HMG20B-213ENST00000488973 CREBBPQ92793 2442 aa14□□□□□ -0.17
HMG20B-213ENST00000488973 Q6YL49 198 aa13.99□□□□□ -0.17
HMG20B-213ENST00000488973 SMIM1B2RUZ4 78 aa13.99□□□□□ -0.17
HMG20B-213ENST00000488973 C18orf65Q6ZTR6 163 aa13.98□□□□□ -0.17
HMG20B-213ENST00000488973 MYO18BQ8IUG5 2567 aa13.98□□□□□ -0.17
HMG20B-213ENST00000488973 UBR5O95071 2799 aaPredicted RBP13.98□□□□□ -0.17
HMG20B-213ENST00000488973 SOSTDC1Q6X4U4 206 aa13.98□□□□□ -0.17
HMG20B-213ENST00000488973 A0A096LNT2 108 aa13.97□□□□□ -0.17
HMG20B-213ENST00000488973 ZNF625Q96I27 306 aaPredicted RBP13.97□□□□□ -0.17
HMG20B-213ENST00000488973 A0A0U1RRA0 63 aa13.95□□□□□ -0.18
HMG20B-213ENST00000488973 Q8N2B8 174 aa13.95□□□□□ -0.18
HMG20B-213ENST00000488973 SMCR5Q8TEV8 140 aa13.95□□□□□ -0.18
HMG20B-213ENST00000488973 PRIMA1Q86XR5 153 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms