RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 ETDBQ3ZM63 59 aa7.73□□□□□ -1.17
COL21A1-211ENST00000488912 SH2D6Q7Z4S9 175 aa7.73□□□□□ -1.17
COL21A1-211ENST00000488912 TNFRSF18Q9Y5U5 241 aa7.73□□□□□ -1.17
COL21A1-211ENST00000488912 TRGV4A0A0C4DH28 118 aa7.72□□□□□ -1.17
COL21A1-211ENST00000488912 FHL2Q14192 279 aa7.72□□□□□ -1.17
COL21A1-211ENST00000488912 LAGE3Q14657 143 aa7.72□□□□□ -1.17
COL21A1-211ENST00000488912 VCYO14598 125 aa7.72□□□□□ -1.17
COL21A1-211ENST00000488912 SPART-AS1P0CW21 52 aa7.72□□□□□ -1.17
COL21A1-211ENST00000488912 DAD1P61803 113 aa7.72□□□□□ -1.17
COL21A1-211ENST00000488912 TM2D2Q9BX73 214 aa7.72□□□□□ -1.17
COL21A1-211ENST00000488912 IGLL5B9A064 214 aa7.71□□□□□ -1.18
COL21A1-211ENST00000488912 HBDP02042 147 aa7.71□□□□□ -1.18
COL21A1-211ENST00000488912 FXYD2P54710 66 aa7.71□□□□□ -1.18
COL21A1-211ENST00000488912 GAGE13Q4V321 117 aa7.71□□□□□ -1.18
COL21A1-211ENST00000488912 TM2D3Q9BRN9 247 aa7.71□□□□□ -1.18
COL21A1-211ENST00000488912 TRBV6-4A0A1B0GX49 114 aa7.7□□□□□ -1.18
COL21A1-211ENST00000488912 Q6ZUT4 128 aa7.7□□□□□ -1.18
COL21A1-211ENST00000488912 PCP2Q8IVA1 136 aa7.7□□□□□ -1.18
COL21A1-211ENST00000488912 DNAJC30Q96LL9 226 aa7.7□□□□□ -1.18
COL21A1-211ENST00000488912 KIR2DL4Q99706 377 aa7.7□□□□□ -1.18
COL21A1-211ENST00000488912 HUWE1Q7Z6Z7 4374 aaKnown RBP7.7□□□□□ -1.18
COL21A1-211ENST00000488912 TRBV10-1A0A0K0K1A3 114 aa7.7□□□□□ -1.18
COL21A1-211ENST00000488912 K7EMI3 77 aa7.7□□□□□ -1.18
COL21A1-211ENST00000488912 FCER1GP30273 86 aa7.7□□□□□ -1.18
COL21A1-211ENST00000488912 FOXI1Q12951 378 aa7.7□□□□□ -1.18
COL21A1-211ENST00000488912 ZNRF2Q8NHG8 242 aa7.7□□□□□ -1.18
COL21A1-211ENST00000488912 C11orf68Q9H3H3 251 aaKnown RBP7.7□□□□□ -1.18
COL21A1-211ENST00000488912 TRBV7-3A0A075B6L6 115 aa7.69□□□□□ -1.18
COL21A1-211ENST00000488912 LOC100131303A0A0U1RQF7 123 aa7.69□□□□□ -1.18
COL21A1-211ENST00000488912 I3L3M4 83 aa7.69□□□□□ -1.18
COL21A1-211ENST00000488912 TSHBP01222 138 aa7.69□□□□□ -1.18
COL21A1-211ENST00000488912 MT-ATP8P03928 68 aa7.69□□□□□ -1.18
COL21A1-211ENST00000488912 ORMDL2Q53FV1 153 aa7.69□□□□□ -1.18
COL21A1-211ENST00000488912 HHLA3Q9XRX5 114 aa7.69□□□□□ -1.18
COL21A1-211ENST00000488912 IGHV3-38A0A0C4DH36 116 aa7.69□□□□□ -1.18
COL21A1-211ENST00000488912 A0A0J9YWU9 116 aa7.69□□□□□ -1.18
COL21A1-211ENST00000488912 RHOHQ15669 191 aa7.69□□□□□ -1.18
COL21A1-211ENST00000488912 ANAPC13Q9BS18 74 aa7.69□□□□□ -1.18
COL21A1-211ENST00000488912 GAGE12JA6NER3 117 aa7.68□□□□□ -1.18
COL21A1-211ENST00000488912 RPL36AP83881 106 aaKnown RBP7.68□□□□□ -1.18
COL21A1-211ENST00000488912 GAGE4Q13068 117 aa7.68□□□□□ -1.18
COL21A1-211ENST00000488912 RPL36ALQ969Q0 106 aaKnown RBP7.68□□□□□ -1.18
COL21A1-211ENST00000488912 VCX2Q9H322 139 aa7.68□□□□□ -1.18
COL21A1-211ENST00000488912 H3BMG7 143 aa7.68□□□□□ -1.18
COL21A1-211ENST00000488912 ATP5G1P05496 136 aa7.68□□□□□ -1.18
COL21A1-211ENST00000488912 GCSHP23434 173 aa7.68□□□□□ -1.18
COL21A1-211ENST00000488912 XGP55808 180 aa7.68□□□□□ -1.18
COL21A1-211ENST00000488912 C12orf74Q32Q52 190 aa7.68□□□□□ -1.18
COL21A1-211ENST00000488912 TCTAP57738 103 aa7.67□□□□□ -1.18
COL21A1-211ENST00000488912 UBE2D3P61077 147 aa7.67□□□□□ -1.18
COL21A1-211ENST00000488912 UBE2D2P62837 147 aa7.67□□□□□ -1.18
COL21A1-211ENST00000488912 CEND1Q8N111 149 aa7.67□□□□□ -1.18
COL21A1-211ENST00000488912 PRADC1Q9BSG0 188 aa7.67□□□□□ -1.18
COL21A1-211ENST00000488912 B5MCH6 92 aa7.67□□□□□ -1.18
COL21A1-211ENST00000488912 APOMO95445 188 aa7.67□□□□□ -1.18
COL21A1-211ENST00000488912 NHLRC4P0CG21 123 aaPredicted RBP7.67□□□□□ -1.18
COL21A1-211ENST00000488912 HTN3P15516 51 aa7.67□□□□□ -1.18
COL21A1-211ENST00000488912 TAL2Q16559 108 aa7.67□□□□□ -1.18
COL21A1-211ENST00000488912 C2orf66Q6UXQ4 117 aa7.67□□□□□ -1.18
COL21A1-211ENST00000488912 CHAC1Q9BUX1 264 aa7.67□□□□□ -1.18
COL21A1-211ENST00000488912 SPANXA1Q9NS26 97 aa7.67□□□□□ -1.18
COL21A1-211ENST00000488912 PRO0255Q9UI72 69 aa7.67□□□□□ -1.18
COL21A1-211ENST00000488912 DNAH9Q9NYC9 4486 aa7.67□□□□□ -1.18
COL21A1-211ENST00000488912 COL7A1Q02388 2944 aa7.66□□□□□ -1.18
COL21A1-211ENST00000488912 K7ERJ3 54 aa7.66□□□□□ -1.18
COL21A1-211ENST00000488912 NMUP48645 174 aa7.66□□□□□ -1.18
COL21A1-211ENST00000488912 RPL39P62891 51 aaKnown RBP7.66□□□□□ -1.18
COL21A1-211ENST00000488912 TOMM6Q96B49 74 aa7.66□□□□□ -1.18
COL21A1-211ENST00000488912 ZMAT4Q9H898 229 aa7.66□□□□□ -1.18
COL21A1-211ENST00000488912 A0A1B0GWB2 263 aa7.66□□□□□ -1.18
COL21A1-211ENST00000488912 F5H768 121 aa7.66□□□□□ -1.18
COL21A1-211ENST00000488912 LINC00694P0DN24 101 aa7.66□□□□□ -1.18
COL21A1-211ENST00000488912 IFI27L1Q96BM0 104 aa7.66□□□□□ -1.18
COL21A1-211ENST00000488912 IGKV2D-26A0A0A0MRZ7 120 aa7.65□□□□□ -1.18
COL21A1-211ENST00000488912 A0A0J9YY99 117 aa7.65□□□□□ -1.18
COL21A1-211ENST00000488912 GYPEP15421 78 aa7.65□□□□□ -1.18
COL21A1-211ENST00000488912 ZFAND6Q6FIF0 208 aa7.65□□□□□ -1.18
COL21A1-211ENST00000488912 DAZ4Q86SG3 579 aaKnown RBP7.65□□□□□ -1.18
COL21A1-211ENST00000488912 DAZ3Q9NR90 486 aaKnown RBP7.65□□□□□ -1.18
COL21A1-211ENST00000488912 NHP2Q9NX24 153 aaKnown RBP7.65□□□□□ -1.18
COL21A1-211ENST00000488912 PAX4O43316 350 aa7.64□□□□□ -1.19
COL21A1-211ENST00000488912 Q6ZTC4 211 aa7.64□□□□□ -1.19
COL21A1-211ENST00000488912 VSIG2Q96IQ7 327 aa7.64□□□□□ -1.19
COL21A1-211ENST00000488912 ODF1Q14990 250 aa7.64□□□□□ -1.19
COL21A1-211ENST00000488912 SMIM20Q8N5G0 67 aa7.64□□□□□ -1.19
COL21A1-211ENST00000488912 C20orf203Q8NBC4 194 aa7.64□□□□□ -1.19
COL21A1-211ENST00000488912 B9D2Q9BPU9 175 aa7.64□□□□□ -1.19
COL21A1-211ENST00000488912 CHCHD7Q9BUK0 85 aa7.64□□□□□ -1.19
COL21A1-211ENST00000488912 NANOS2P60321 138 aaKnown RBP7.63□□□□□ -1.19
COL21A1-211ENST00000488912 NTM-AS1Q6ZSK4 140 aa7.63□□□□□ -1.19
COL21A1-211ENST00000488912 C11orf45Q8TAV5 145 aa7.63□□□□□ -1.19
COL21A1-211ENST00000488912 SCGB3A1Q96QR1 104 aa7.63□□□□□ -1.19
COL21A1-211ENST00000488912 ATP5LO75964 103 aa7.63□□□□□ -1.19
COL21A1-211ENST00000488912 SMCPP49901 116 aaPredicted RBP7.63□□□□□ -1.19
COL21A1-211ENST00000488912 NFE4Q86UQ8 179 aa7.63□□□□□ -1.19
COL21A1-211ENST00000488912 TTTY13Q9BZ97 58 aa7.63□□□□□ -1.19
COL21A1-211ENST00000488912 PRKDCP78527 4128 aaKnown RBP7.62□□□□□ -1.19
COL21A1-211ENST00000488912 MEGF8Q7Z7M0 2845 aa7.62□□□□□ -1.19
COL21A1-211ENST00000488912 TRBV25-1A0A075B6N4 114 aa7.62□□□□□ -1.19
COL21A1-211ENST00000488912 A0A087WX48 190 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms