RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 A0A096LNJ9 63 aa8.34□□□□□ -1.07
TRAIP-209ENST00000488860 FAM19A2Q8N3H0 131 aa8.34□□□□□ -1.07
TRAIP-209ENST00000488860 C10orf126Q8N4M7 172 aa8.34□□□□□ -1.07
TRAIP-209ENST00000488860 SCGB3A1Q96QR1 104 aa8.34□□□□□ -1.07
TRAIP-209ENST00000488860 KRTAP1-5Q9BYS1 174 aa8.34□□□□□ -1.07
TRAIP-209ENST00000488860 Q9HAA7 133 aa8.34□□□□□ -1.07
TRAIP-209ENST00000488860 HYDINQ4G0P3 5121 aa8.34□□□□□ -1.07
TRAIP-209ENST00000488860 A0A1B0GUV1 79 aa8.33□□□□□ -1.08
TRAIP-209ENST00000488860 NUPR1O60356 82 aa8.33□□□□□ -1.08
TRAIP-209ENST00000488860 LINC00269Q8N2A0 174 aa8.33□□□□□ -1.08
TRAIP-209ENST00000488860 UBE2WQ96B02 151 aa8.33□□□□□ -1.08
TRAIP-209ENST00000488860 OPRPNQ99935 248 aaPredicted RBP8.33□□□□□ -1.08
TRAIP-209ENST00000488860 TIMM21Q9BVV7 248 aa8.33□□□□□ -1.08
TRAIP-209ENST00000488860 KMT2AQ03164 3969 aa8.32□□□□□ -1.08
TRAIP-209ENST00000488860 S100A6P06703 90 aa8.32□□□□□ -1.08
TRAIP-209ENST00000488860 Q6ZN92 141 aa8.32□□□□□ -1.08
TRAIP-209ENST00000488860 TMA7Q9Y2S6 64 aaKnown RBP8.32□□□□□ -1.08
TRAIP-209ENST00000488860 IGLV4-3A0A075B6K6 122 aa8.31□□□□□ -1.08
TRAIP-209ENST00000488860 LINC01549A6NIU2 74 aa8.31□□□□□ -1.08
TRAIP-209ENST00000488860 REG3AQ06141 175 aa8.31□□□□□ -1.08
TRAIP-209ENST00000488860 PDZD11Q5EBL8 140 aa8.31□□□□□ -1.08
TRAIP-209ENST00000488860 ZNF664Q8N3J9 261 aa8.31□□□□□ -1.08
TRAIP-209ENST00000488860 TMEM141Q96I45 108 aa8.31□□□□□ -1.08
TRAIP-209ENST00000488860 TIMM17AQ99595 171 aa8.31□□□□□ -1.08
TRAIP-209ENST00000488860 CDC42SE2Q9NRR3 84 aa8.31□□□□□ -1.08
TRAIP-209ENST00000488860 PYGO1Q9Y3Y4 419 aa8.31□□□□□ -1.08
TRAIP-209ENST00000488860 CSDC2Q9Y534 153 aaKnown RBP8.31□□□□□ -1.08
TRAIP-209ENST00000488860 IGIPA6NJ69 53 aa8.3□□□□□ -1.08
TRAIP-209ENST00000488860 IBA57-AS1B1ANH7 110 aa8.3□□□□□ -1.08
TRAIP-209ENST00000488860 K7EP13 123 aa8.3□□□□□ -1.08
TRAIP-209ENST00000488860 ZC2HC1BQ5TFG8 222 aa8.3□□□□□ -1.08
TRAIP-209ENST00000488860 TEX43Q6ZNM6 134 aa8.3□□□□□ -1.08
TRAIP-209ENST00000488860 ERASQ7Z444 233 aa8.3□□□□□ -1.08
TRAIP-209ENST00000488860 IGLV10-54A0A075B6I4 117 aa8.29□□□□□ -1.08
TRAIP-209ENST00000488860 IFITM10A6NMD0 228 aa8.29□□□□□ -1.08
TRAIP-209ENST00000488860 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.29□□□□□ -1.08
TRAIP-209ENST00000488860 FABP4P15090 132 aa8.29□□□□□ -1.08
TRAIP-209ENST00000488860 MRPS36P82909 103 aaKnown RBP8.29□□□□□ -1.08
TRAIP-209ENST00000488860 COA6Q5JTJ3 125 aaKnown RBP8.29□□□□□ -1.08
TRAIP-209ENST00000488860 ENHOQ6UWT2 76 aa8.29□□□□□ -1.08
TRAIP-209ENST00000488860 C2orf88Q9BSF0 95 aa8.29□□□□□ -1.08
TRAIP-209ENST00000488860 IGKV2D-24A0A075B6R9 120 aa8.28□□□□□ -1.08
TRAIP-209ENST00000488860 TRAV8-3A0A0A6YYJ7 113 aa8.28□□□□□ -1.08
TRAIP-209ENST00000488860 TRAV13-1A0A0B4J241 112 aa8.28□□□□□ -1.08
TRAIP-209ENST00000488860 ATP5LO75964 103 aa8.28□□□□□ -1.08
TRAIP-209ENST00000488860 LEPROTL1O95214 131 aa8.28□□□□□ -1.08
TRAIP-209ENST00000488860 PAPPA-AS1Q5QFB9 102 aa8.28□□□□□ -1.08
TRAIP-209ENST00000488860 Q6ZR54 194 aa8.28□□□□□ -1.08
TRAIP-209ENST00000488860 LINC00173Q6ZV60 143 aa8.28□□□□□ -1.08
TRAIP-209ENST00000488860 FAM104AQ969W3 186 aa8.28□□□□□ -1.08
TRAIP-209ENST00000488860 VCX2Q9H322 139 aa8.28□□□□□ -1.08
TRAIP-209ENST00000488860 PRR34Q9NV39 138 aa8.28□□□□□ -1.08
TRAIP-209ENST00000488860 H0Y8G0 127 aa8.27□□□□□ -1.09
TRAIP-209ENST00000488860 NPSP0C0P6 89 aa8.27□□□□□ -1.09
TRAIP-209ENST00000488860 MIAQ16674 131 aa8.27□□□□□ -1.09
TRAIP-209ENST00000488860 C6orf223Q8N319 242 aa8.27□□□□□ -1.09
TRAIP-209ENST00000488860 BAALCQ8WXS3 180 aa8.27□□□□□ -1.09
TRAIP-209ENST00000488860 IFI27L1Q96BM0 104 aa8.27□□□□□ -1.09
TRAIP-209ENST00000488860 C1orf43Q9BWL3 253 aa8.27□□□□□ -1.09
TRAIP-209ENST00000488860 HSPB8Q9UJY1 196 aa8.27□□□□□ -1.09
TRAIP-209ENST00000488860 KMT2CQ8NEZ4 4911 aaKnown RBP8.27□□□□□ -1.09
TRAIP-209ENST00000488860 LINC00959A0A1B0GUT2 108 aa8.26□□□□□ -1.09
TRAIP-209ENST00000488860 S100A2P29034 98 aa8.26□□□□□ -1.09
TRAIP-209ENST00000488860 SS18Q15532 418 aa8.26□□□□□ -1.09
TRAIP-209ENST00000488860 C1orf134Q5TEV5 83 aa8.26□□□□□ -1.09
TRAIP-209ENST00000488860 RMI2Q96E14 147 aa8.26□□□□□ -1.09
TRAIP-209ENST00000488860 RYR2Q92736 4967 aa8.26□□□□□ -1.09
TRAIP-209ENST00000488860 DNAH10Q8IVF4 4471 aa8.26□□□□□ -1.09
TRAIP-209ENST00000488860 PSCAO43653 123 aa8.25□□□□□ -1.09
TRAIP-209ENST00000488860 PRSS1P07477 247 aa8.25□□□□□ -1.09
TRAIP-209ENST00000488860 XCL1P47992 114 aa8.25□□□□□ -1.09
TRAIP-209ENST00000488860 SNRPEP62304 92 aaKnown RBP8.25□□□□□ -1.09
TRAIP-209ENST00000488860 NFE4Q86UQ8 179 aa8.25□□□□□ -1.09
TRAIP-209ENST00000488860 AMELXQ99217 191 aa8.25□□□□□ -1.09
TRAIP-209ENST00000488860 FRAS1Q86XX4 4008 aa8.24□□□□□ -1.09
TRAIP-209ENST00000488860 DNAH2Q9P225 4427 aa8.24□□□□□ -1.09
TRAIP-209ENST00000488860 TRAV8-4A0A0B4J246 113 aa8.24□□□□□ -1.09
TRAIP-209ENST00000488860 CCL25O15444 150 aa8.24□□□□□ -1.09
TRAIP-209ENST00000488860 PMVKQ15126 192 aa8.24□□□□□ -1.09
TRAIP-209ENST00000488860 HIST3H2BBQ8N257 126 aa8.24□□□□□ -1.09
TRAIP-209ENST00000488860 CHCHD10Q8WYQ3 142 aaPredicted RBP8.24□□□□□ -1.09
TRAIP-209ENST00000488860 GAGE12HA6NDE8 117 aa8.23□□□□□ -1.09
TRAIP-209ENST00000488860 UBE2D1P51668 147 aa8.23□□□□□ -1.09
TRAIP-209ENST00000488860 TM2D2Q9BX73 214 aa8.23□□□□□ -1.09
TRAIP-209ENST00000488860 CST9LQ9H4G1 147 aa8.23□□□□□ -1.09
TRAIP-209ENST00000488860 PRSS29PA6NIE9 313 aa8.22□□□□□ -1.09
TRAIP-209ENST00000488860 PACRGQ96M98 296 aaPredicted RBP8.22□□□□□ -1.09
TRAIP-209ENST00000488860 MAP1LC3CQ9BXW4 147 aa8.22□□□□□ -1.09
TRAIP-209ENST00000488860 C5orf52A6NGY3 159 aa8.21□□□□□ -1.1
TRAIP-209ENST00000488860 KRTDAPP60985 99 aa8.21□□□□□ -1.1
TRAIP-209ENST00000488860 CHTOPQ9Y3Y2 248 aaKnown RBP8.21□□□□□ -1.1
TRAIP-209ENST00000488860 COX11Q9Y6N1 276 aa8.21□□□□□ -1.1
TRAIP-209ENST00000488860 A0A0J9YXV3 536 aa8.2□□□□□ -1.1
TRAIP-209ENST00000488860 LINC00242Q5T6M2 205 aa8.2□□□□□ -1.1
TRAIP-209ENST00000488860 Q6ZRN7 208 aaPredicted RBP8.2□□□□□ -1.1
TRAIP-209ENST00000488860 HIST1H2BLQ99880 126 aa8.2□□□□□ -1.1
TRAIP-209ENST00000488860 GEMIN7Q9H840 131 aaKnown RBP8.2□□□□□ -1.1
TRAIP-209ENST00000488860 TRAV12-1A0A0B4J245 112 aa8.19□□□□□ -1.1
TRAIP-209ENST00000488860 LECT2O14960 151 aa8.19□□□□□ -1.1
TRAIP-209ENST00000488860 FOXI1Q12951 378 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms