RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 SMIM6P0DI80 62 aa7.47□□□□□ -1.21
LCN2-206ENST00000488391 COTL1Q14019 142 aa7.47□□□□□ -1.21
LCN2-206ENST00000488391 JOSD1Q15040 202 aaPredicted RBP7.47□□□□□ -1.21
LCN2-206ENST00000488391 TMEM97Q5BJF2 176 aa7.47□□□□□ -1.21
LCN2-206ENST00000488391 TOMM6Q96B49 74 aa7.47□□□□□ -1.21
LCN2-206ENST00000488391 Q9UF83 564 aa7.47□□□□□ -1.21
LCN2-206ENST00000488391 CYSLTR1Q9Y271 337 aa7.47□□□□□ -1.21
LCN2-206ENST00000488391 FAT1Q14517 4588 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 GAGE12JA6NER3 117 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 H3BNG1 76 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 J3QL48 77 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 PAX4O43316 350 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 KRTAP10-1P60331 282 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 GAGE1Q13065 139 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 GAGE4Q13068 117 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 GAGE5Q13069 117 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 GAGE13Q4V321 117 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 C2orf66Q6UXQ4 117 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 C20orf203Q8NBC4 194 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 UPK3BQ9BT76 320 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 MAP1LC3CQ9BXW4 147 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 GTSF1LQ9H1H1 148 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 VPS13BQ7Z7G8 4022 aa7.46□□□□□ -1.22
LCN2-206ENST00000488391 EREGO14944 169 aa7.45□□□□□ -1.22
LCN2-206ENST00000488391 C3orf79P0CE67 100 aa7.45□□□□□ -1.22
LCN2-206ENST00000488391 KRTDAPP60985 99 aa7.45□□□□□ -1.22
LCN2-206ENST00000488391 PET117Q6UWS5 81 aa7.45□□□□□ -1.22
LCN2-206ENST00000488391 Q6ZRN7 208 aaPredicted RBP7.45□□□□□ -1.22
LCN2-206ENST00000488391 SH2D6Q7Z4S9 175 aa7.45□□□□□ -1.22
LCN2-206ENST00000488391 IFI27L1Q96BM0 104 aa7.45□□□□□ -1.22
LCN2-206ENST00000488391 MRPS16Q9Y3D3 137 aaKnown RBP7.45□□□□□ -1.22
LCN2-206ENST00000488391 LOC100131303A0A0U1RQF7 123 aa7.44□□□□□ -1.22
LCN2-206ENST00000488391 SYS1-DBNDD2H3BUS1 97 aa7.44□□□□□ -1.22
LCN2-206ENST00000488391 NPSP0C0P6 89 aa7.44□□□□□ -1.22
LCN2-206ENST00000488391 GYPEP15421 78 aa7.44□□□□□ -1.22
LCN2-206ENST00000488391 PYY3Q5JQD4 70 aa7.44□□□□□ -1.22
LCN2-206ENST00000488391 LINC00173Q6ZV60 143 aa7.44□□□□□ -1.22
LCN2-206ENST00000488391 ERASQ7Z444 233 aa7.44□□□□□ -1.22
LCN2-206ENST00000488391 TMEM141Q96I45 108 aa7.44□□□□□ -1.22
LCN2-206ENST00000488391 VSIG2Q96IQ7 327 aa7.44□□□□□ -1.22
LCN2-206ENST00000488391 TIMM17AQ99595 171 aa7.44□□□□□ -1.22
LCN2-206ENST00000488391 IGHV3-38A0A0C4DH36 116 aa7.43□□□□□ -1.22
LCN2-206ENST00000488391 C20orf202A1L168 122 aa7.43□□□□□ -1.22
LCN2-206ENST00000488391 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.43□□□□□ -1.22
LCN2-206ENST00000488391 FAM229AH3BQW9 127 aa7.43□□□□□ -1.22
LCN2-206ENST00000488391 HAMPP81172 84 aa7.43□□□□□ -1.22
LCN2-206ENST00000488391 SMAGPQ0VAQ4 97 aa7.43□□□□□ -1.22
LCN2-206ENST00000488391 CDPF1Q6NVV7 123 aa7.43□□□□□ -1.22
LCN2-206ENST00000488391 ATP6V0E2Q8NHE4 81 aa7.43□□□□□ -1.22
LCN2-206ENST00000488391 SCGB3A1Q96QR1 104 aa7.43□□□□□ -1.22
LCN2-206ENST00000488391 CHCHD7Q9BUK0 85 aa7.43□□□□□ -1.22
LCN2-206ENST00000488391 PYGO1Q9Y3Y4 419 aa7.43□□□□□ -1.22
LCN2-206ENST00000488391 IGIPA6NJ69 53 aa7.42□□□□□ -1.22
LCN2-206ENST00000488391 H7C423 109 aa7.42□□□□□ -1.22
LCN2-206ENST00000488391 SCGB1D1O95968 90 aa7.42□□□□□ -1.22
LCN2-206ENST00000488391 DNAH10OSP0CZ25 163 aa7.42□□□□□ -1.22
LCN2-206ENST00000488391 MRPL23Q16540 153 aaKnown RBP7.42□□□□□ -1.22
LCN2-206ENST00000488391 LINC00518Q8N0U6 118 aa7.42□□□□□ -1.22
LCN2-206ENST00000488391 TIMM21Q9BVV7 248 aa7.42□□□□□ -1.22
LCN2-206ENST00000488391 ICOSQ9Y6W8 199 aa7.42□□□□□ -1.22
LCN2-206ENST00000488391 TRBV25-1A0A075B6N4 114 aa7.41□□□□□ -1.22
LCN2-206ENST00000488391 TRAV12-1A0A0B4J245 112 aa7.41□□□□□ -1.22
LCN2-206ENST00000488391 RPL39P62891 51 aaKnown RBP7.41□□□□□ -1.22
LCN2-206ENST00000488391 PAPPA-AS1Q5QFB9 102 aa7.41□□□□□ -1.22
LCN2-206ENST00000488391 LINC01545Q5VT33 79 aa7.41□□□□□ -1.22
LCN2-206ENST00000488391 Q6ZN92 141 aa7.41□□□□□ -1.22
LCN2-206ENST00000488391 NTM-AS1Q6ZSK4 140 aa7.41□□□□□ -1.22
LCN2-206ENST00000488391 Q8N976 141 aa7.41□□□□□ -1.22
LCN2-206ENST00000488391 SPANXA1Q9NS26 97 aa7.41□□□□□ -1.22
LCN2-206ENST00000488391 TRBV6-8A0A0A6YYG3 113 aa7.4□□□□□ -1.22
LCN2-206ENST00000488391 SIVA1O15304 175 aa7.4□□□□□ -1.22
LCN2-206ENST00000488391 PRSS1P07477 247 aa7.4□□□□□ -1.22
LCN2-206ENST00000488391 TIRAPP58753 221 aa7.4□□□□□ -1.22
LCN2-206ENST00000488391 MRPL52Q86TS9 123 aaKnown RBP7.4□□□□□ -1.22
LCN2-206ENST00000488391 TMEM243Q9BU79 118 aa7.4□□□□□ -1.22
LCN2-206ENST00000488391 CSDC2Q9Y534 153 aaKnown RBP7.4□□□□□ -1.22
LCN2-206ENST00000488391 A0A087WTM6 91 aa7.39□□□□□ -1.23
LCN2-206ENST00000488391 A0A096LPF7 62 aa7.39□□□□□ -1.23
LCN2-206ENST00000488391 GCSHP23434 173 aa7.39□□□□□ -1.23
LCN2-206ENST00000488391 DEFB104AQ8WTQ1 72 aa7.39□□□□□ -1.23
LCN2-206ENST00000488391 BAALCQ8WXS3 180 aa7.39□□□□□ -1.23
LCN2-206ENST00000488391 C12orf57Q99622 126 aa7.39□□□□□ -1.23
LCN2-206ENST00000488391 UBE2D4Q9Y2X8 147 aa7.39□□□□□ -1.23
LCN2-206ENST00000488391 UBR4Q5T4S7 5183 aa7.39□□□□□ -1.23
LCN2-206ENST00000488391 A0A087WX48 190 aa7.38□□□□□ -1.23
LCN2-206ENST00000488391 ZNF25P17030 456 aaPredicted RBP7.38□□□□□ -1.23
LCN2-206ENST00000488391 MRPS36P82909 103 aaKnown RBP7.38□□□□□ -1.23
LCN2-206ENST00000488391 PMVKQ15126 192 aa7.38□□□□□ -1.23
LCN2-206ENST00000488391 TEX43Q6ZNM6 134 aa7.38□□□□□ -1.23
LCN2-206ENST00000488391 IGLV4-3A0A075B6K6 122 aa7.37□□□□□ -1.23
LCN2-206ENST00000488391 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.37□□□□□ -1.23
LCN2-206ENST00000488391 IGKV2-29A2NJV5 120 aaPredicted RBP7.37□□□□□ -1.23
LCN2-206ENST00000488391 H0Y8G0 127 aa7.37□□□□□ -1.23
LCN2-206ENST00000488391 UBE2L6O14933 153 aa7.37□□□□□ -1.23
LCN2-206ENST00000488391 PKIAP61925 76 aa7.37□□□□□ -1.23
LCN2-206ENST00000488391 S100A12P80511 92 aa7.37□□□□□ -1.23
LCN2-206ENST00000488391 ODF1Q14990 250 aa7.37□□□□□ -1.23
LCN2-206ENST00000488391 FGF6P10767 208 aa7.36□□□□□ -1.23
LCN2-206ENST00000488391 DGAT2L7PQ6IED9 249 aa7.36□□□□□ -1.23
LCN2-206ENST00000488391 NFE4Q86UQ8 179 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms