RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 RNASE13Q5GAN3 156 aaKnown RBP7.35□□□□□ -1.23
UBE4B-210ENST00000488228 Q6ZUT4 128 aa7.35□□□□□ -1.23
UBE4B-210ENST00000488228 MRPL52Q86TS9 123 aaKnown RBP7.35□□□□□ -1.23
UBE4B-210ENST00000488228 OR5A1Q8NGJ0 315 aa7.35□□□□□ -1.23
UBE4B-210ENST00000488228 RMI2Q96E14 147 aa7.35□□□□□ -1.23
UBE4B-210ENST00000488228 C1orf43Q9BWL3 253 aa7.35□□□□□ -1.23
UBE4B-210ENST00000488228 UBE2D4Q9Y2X8 147 aa7.35□□□□□ -1.23
UBE4B-210ENST00000488228 A0A087WTM6 91 aa7.34□□□□□ -1.23
UBE4B-210ENST00000488228 LECT2O14960 151 aa7.34□□□□□ -1.23
UBE4B-210ENST00000488228 MAPKAPK5-AS1Q8N8E1 139 aa7.34□□□□□ -1.23
UBE4B-210ENST00000488228 TMEM101Q96IK0 257 aa7.34□□□□□ -1.23
UBE4B-210ENST00000488228 TM2D2Q9BX73 214 aa7.34□□□□□ -1.23
UBE4B-210ENST00000488228 NXT2Q9NPJ8 142 aaKnown RBP7.34□□□□□ -1.23
UBE4B-210ENST00000488228 ATP6V1G1O75348 118 aa7.33□□□□□ -1.24
UBE4B-210ENST00000488228 FUSP35637 526 aaKnown RBP eCLIP7.33□□□□□ -1.241e-5■■■□□ 16.6
UBE4B-210ENST00000488228 LRCOL1A6NCL2 159 aa7.32□□□□□ -1.24
UBE4B-210ENST00000488228 KRTAP10-2P60368 255 aa7.32□□□□□ -1.24
UBE4B-210ENST00000488228 DGAT2L7PQ6IED9 249 aa7.32□□□□□ -1.24
UBE4B-210ENST00000488228 KRTAP26-1Q6PEX3 210 aa7.32□□□□□ -1.24
UBE4B-210ENST00000488228 ZNF664Q8N3J9 261 aa7.32□□□□□ -1.24
UBE4B-210ENST00000488228 C18orf32Q8TCD1 76 aa7.32□□□□□ -1.24
UBE4B-210ENST00000488228 BAALCQ8WXS3 180 aa7.32□□□□□ -1.24
UBE4B-210ENST00000488228 TMEM18Q96B42 140 aa7.32□□□□□ -1.24
UBE4B-210ENST00000488228 CDC42SE2Q9NRR3 84 aa7.32□□□□□ -1.24
UBE4B-210ENST00000488228 ORMDL2Q53FV1 153 aa7.31□□□□□ -1.24
UBE4B-210ENST00000488228 C2orf66Q6UXQ4 117 aa7.31□□□□□ -1.24
UBE4B-210ENST00000488228 SPATA12Q7Z6I5 190 aa7.31□□□□□ -1.24
UBE4B-210ENST00000488228 PRSS3P2Q8NHM4 247 aa7.31□□□□□ -1.24
UBE4B-210ENST00000488228 FAM104AQ969W3 186 aa7.31□□□□□ -1.24
UBE4B-210ENST00000488228 OPRPNQ99935 248 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-210ENST00000488228 TIMM21Q9BVV7 248 aa7.31□□□□□ -1.24
UBE4B-210ENST00000488228 SPANXA1Q9NS26 97 aa7.31□□□□□ -1.24
UBE4B-210ENST00000488228 COX11Q9Y6N1 276 aa7.31□□□□□ -1.24
UBE4B-210ENST00000488228 COLCA2A8K830 154 aa7.3□□□□□ -1.24
UBE4B-210ENST00000488228 SMAGPQ0VAQ4 97 aa7.3□□□□□ -1.24
UBE4B-210ENST00000488228 FA2HQ7L5A8 372 aa7.3□□□□□ -1.24
UBE4B-210ENST00000488228 CHCHD10Q8WYQ3 142 aaPredicted RBP7.3□□□□□ -1.24
UBE4B-210ENST00000488228 URB1-AS1Q96HZ7 61 aa7.3□□□□□ -1.24
UBE4B-210ENST00000488228 CYSLTR1Q9Y271 337 aa7.3□□□□□ -1.24
UBE4B-210ENST00000488228 CSDC2Q9Y534 153 aaKnown RBP7.3□□□□□ -1.24
UBE4B-210ENST00000488228 LRP1BQ9NZR2 4599 aa7.3□□□□□ -1.24
UBE4B-210ENST00000488228 TRAV8-4A0A0B4J246 113 aa7.29□□□□□ -1.24
UBE4B-210ENST00000488228 LINC00959A0A1B0GUT2 108 aa7.29□□□□□ -1.24
UBE4B-210ENST00000488228 GAGE12HA6NDE8 117 aa7.29□□□□□ -1.24
UBE4B-210ENST00000488228 K7EMI3 77 aa7.29□□□□□ -1.24
UBE4B-210ENST00000488228 EREGO14944 169 aa7.29□□□□□ -1.24
UBE4B-210ENST00000488228 TRGC2P03986 189 aa7.29□□□□□ -1.24
UBE4B-210ENST00000488228 IGLV4-3A0A075B6K6 122 aa7.28□□□□□ -1.24
UBE4B-210ENST00000488228 TRAV13-1A0A0B4J241 112 aa7.28□□□□□ -1.24
UBE4B-210ENST00000488228 LINC01546A6NGU7 62 aa7.28□□□□□ -1.24
UBE4B-210ENST00000488228 USP17L23D6RBM5 183 aa7.28□□□□□ -1.24
UBE4B-210ENST00000488228 CCL25O15444 150 aa7.28□□□□□ -1.24
UBE4B-210ENST00000488228 XCL1P47992 114 aa7.28□□□□□ -1.24
UBE4B-210ENST00000488228 Q8N814 137 aa7.28□□□□□ -1.24
UBE4B-210ENST00000488228 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.27□□□□□ -1.25
UBE4B-210ENST00000488228 IFITM10A6NMD0 228 aa7.27□□□□□ -1.25
UBE4B-210ENST00000488228 MRPS36P82909 103 aaKnown RBP7.27□□□□□ -1.25
UBE4B-210ENST00000488228 PMCHL1Q16048 86 aa7.27□□□□□ -1.25
UBE4B-210ENST00000488228 ZC2HC1BQ5TFG8 222 aa7.27□□□□□ -1.25
UBE4B-210ENST00000488228 AP5S1Q9NUS5 200 aa7.27□□□□□ -1.25
UBE4B-210ENST00000488228 PYGO1Q9Y3Y4 419 aa7.27□□□□□ -1.25
UBE4B-210ENST00000488228 KIAA1109Q2LD37 5005 aa7.26□□□□□ -1.25
UBE4B-210ENST00000488228 A0A096LNJ9 63 aa7.26□□□□□ -1.25
UBE4B-210ENST00000488228 C16orf90A8MZG2 172 aa7.26□□□□□ -1.25
UBE4B-210ENST00000488228 FOXI1Q12951 378 aa7.26□□□□□ -1.25
UBE4B-210ENST00000488228 SS18Q15532 418 aa7.26□□□□□ -1.25
UBE4B-210ENST00000488228 CFAP161Q6P656 301 aa7.26□□□□□ -1.25
UBE4B-210ENST00000488228 LINC00173Q6ZV60 143 aa7.26□□□□□ -1.25
UBE4B-210ENST00000488228 TOMM6Q96B49 74 aa7.26□□□□□ -1.25
UBE4B-210ENST00000488228 TMEM141Q96I45 108 aa7.26□□□□□ -1.25
UBE4B-210ENST00000488228 APOBP04114 4563 aaKnown RBP7.25□□□□□ -1.25
UBE4B-210ENST00000488228 IGIPA6NJ69 53 aa7.25□□□□□ -1.25
UBE4B-210ENST00000488228 S100A1P23297 94 aa7.25□□□□□ -1.25
UBE4B-210ENST00000488228 C15orf56Q8N910 161 aa7.25□□□□□ -1.25
UBE4B-210ENST00000488228 IGLV5-52A0A0A0MRZ9 124 aa7.24□□□□□ -1.25
UBE4B-210ENST00000488228 LINC00614P0C842 121 aa7.24□□□□□ -1.25
UBE4B-210ENST00000488228 Q6ZN92 141 aa7.24□□□□□ -1.25
UBE4B-210ENST00000488228 TEX43Q6ZNM6 134 aa7.24□□□□□ -1.25
UBE4B-210ENST00000488228 SCGB3A1Q96QR1 104 aa7.24□□□□□ -1.25
UBE4B-210ENST00000488228 TIMM17AQ99595 171 aa7.24□□□□□ -1.25
UBE4B-210ENST00000488228 DNAH8Q96JB1 4490 aa7.23□□□□□ -1.25
UBE4B-210ENST00000488228 C1orf196B1AJZ1 125 aa7.23□□□□□ -1.25
UBE4B-210ENST00000488228 HBDP02042 147 aa7.23□□□□□ -1.25
UBE4B-210ENST00000488228 PRSS1P07477 247 aa7.23□□□□□ -1.25
UBE4B-210ENST00000488228 G0S2P27469 103 aa7.23□□□□□ -1.25
UBE4B-210ENST00000488228 CDPF1Q6NVV7 123 aa7.23□□□□□ -1.25
UBE4B-210ENST00000488228 CD164L2Q6UWJ8 174 aa7.23□□□□□ -1.25
UBE4B-210ENST00000488228 BAGE3Q86Y29 109 aa7.23□□□□□ -1.25
UBE4B-210ENST00000488228 NTN5Q8WTR8 489 aaPredicted RBP7.23□□□□□ -1.25
UBE4B-210ENST00000488228 hDV102S1A0JD36 115 aa7.22□□□□□ -1.25
UBE4B-210ENST00000488228 LINC00310P59036 64 aa7.22□□□□□ -1.25
UBE4B-210ENST00000488228 RAB5BP61020 215 aa7.22□□□□□ -1.25
UBE4B-210ENST00000488228 LINC01620Q4KN68 170 aa7.22□□□□□ -1.25
UBE4B-210ENST00000488228 HIGD2BQ4VC39 106 aa7.22□□□□□ -1.25
UBE4B-210ENST00000488228 C14orf177Q52M58 125 aa7.22□□□□□ -1.25
UBE4B-210ENST00000488228 ERASQ7Z444 233 aa7.22□□□□□ -1.25
UBE4B-210ENST00000488228 AMELXQ99217 191 aa7.22□□□□□ -1.25
UBE4B-210ENST00000488228 C2orf88Q9BSF0 95 aa7.22□□□□□ -1.25
UBE4B-210ENST00000488228 RYR1P21817 5038 aa7.22□□□□□ -1.25
UBE4B-210ENST00000488228 COX7A2LO14548 114 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 542.1 ms