RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 Q9HAA7 133 aa8.92□□□□□ -0.98
COL4A6-207ENST00000487645 SPANXA1Q9NS26 97 aa8.92□□□□□ -0.98
COL4A6-207ENST00000487645 PYGO1Q9Y3Y4 419 aa8.92□□□□□ -0.98
COL4A6-207ENST00000487645 FRAS1Q86XX4 4008 aa8.91□□□□□ -0.98
COL4A6-207ENST00000487645 TRAV8-4A0A0B4J246 113 aa8.91□□□□□ -0.98
COL4A6-207ENST00000487645 ZNF664Q8N3J9 261 aa8.91□□□□□ -0.98
COL4A6-207ENST00000487645 AP5S1Q9NUS5 200 aa8.91□□□□□ -0.98
COL4A6-207ENST00000487645 CYSLTR1Q9Y271 337 aa8.91□□□□□ -0.98
COL4A6-207ENST00000487645 RYR3Q15413 4870 aa8.91□□□□□ -0.98
COL4A6-207ENST00000487645 MRPS36P82909 103 aaKnown RBP8.9□□□□□ -0.98
COL4A6-207ENST00000487645 C2orf66Q6UXQ4 117 aa8.9□□□□□ -0.98
COL4A6-207ENST00000487645 NPSP0C0P6 89 aa8.89□□□□□ -0.99
COL4A6-207ENST00000487645 TOMM6Q96B49 74 aa8.89□□□□□ -0.99
COL4A6-207ENST00000487645 URB1-AS1Q96HZ7 61 aa8.89□□□□□ -0.99
COL4A6-207ENST00000487645 CCL25O15444 150 aa8.88□□□□□ -0.99
COL4A6-207ENST00000487645 CLPSL2Q6UWE3 100 aa8.88□□□□□ -0.99
COL4A6-207ENST00000487645 CHCHD1Q96BP2 118 aaKnown RBP8.88□□□□□ -0.99
COL4A6-207ENST00000487645 C1orf43Q9BWL3 253 aa8.88□□□□□ -0.99
COL4A6-207ENST00000487645 DNAH2Q9P225 4427 aa8.87□□□□□ -0.99
COL4A6-207ENST00000487645 IGKV2D-24A0A075B6R9 120 aa8.87□□□□□ -0.99
COL4A6-207ENST00000487645 IGIPA6NJ69 53 aa8.87□□□□□ -0.99
COL4A6-207ENST00000487645 PSCAO43653 123 aa8.87□□□□□ -0.99
COL4A6-207ENST00000487645 BAGE3Q86Y29 109 aa8.87□□□□□ -0.99
COL4A6-207ENST00000487645 FAM104AQ969W3 186 aa8.87□□□□□ -0.99
COL4A6-207ENST00000487645 LINC00959A0A1B0GUT2 108 aa8.86□□□□□ -0.99
COL4A6-207ENST00000487645 PRSS29PA6NIE9 313 aa8.86□□□□□ -0.99
COL4A6-207ENST00000487645 PAPPA-AS1Q5QFB9 102 aa8.86□□□□□ -0.99
COL4A6-207ENST00000487645 ERASQ7Z444 233 aa8.86□□□□□ -0.99
COL4A6-207ENST00000487645 TIMM17AQ99595 171 aa8.86□□□□□ -0.99
COL4A6-207ENST00000487645 DNAH10Q8IVF4 4471 aa8.85□□□□□ -0.99
COL4A6-207ENST00000487645 IGLV4-3A0A075B6K6 122 aa8.85□□□□□ -0.99
COL4A6-207ENST00000487645 IGKV3OR2-268A0A0C4DH90 116 aa8.85□□□□□ -0.99
COL4A6-207ENST00000487645 TNP2Q05952 138 aa8.85□□□□□ -0.99
COL4A6-207ENST00000487645 SS18Q15532 418 aa8.85□□□□□ -0.99
COL4A6-207ENST00000487645 KRTAP26-1Q6PEX3 210 aa8.85□□□□□ -0.99
COL4A6-207ENST00000487645 Q6ZUT4 128 aa8.85□□□□□ -0.99
COL4A6-207ENST00000487645 TMEM141Q96I45 108 aa8.85□□□□□ -0.99
COL4A6-207ENST00000487645 SCGB3A1Q96QR1 104 aa8.85□□□□□ -0.99
COL4A6-207ENST00000487645 OPRPNQ99935 248 aaPredicted RBP8.85□□□□□ -0.99
COL4A6-207ENST00000487645 DNAH17Q9UFH2 4485 aa8.85□□□□□ -0.99
COL4A6-207ENST00000487645 C1orf196B1AJZ1 125 aa8.84□□□□□ -0.99
COL4A6-207ENST00000487645 Q6ZN92 141 aa8.84□□□□□ -0.99
COL4A6-207ENST00000487645 MAPKAPK5-AS1Q8N8E1 139 aa8.84□□□□□ -0.99
COL4A6-207ENST00000487645 VCX2Q9H322 139 aa8.84□□□□□ -0.99
COL4A6-207ENST00000487645 IGLV10-54A0A075B6I4 117 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 A0A096LNJ9 63 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 LRCOL1A6NCL2 159 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 HIST1H2BKO60814 126 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 HBDP02042 147 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 HIST1H2BJP06899 126 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 HIST1H2BOP23527 126 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 HIST1H2BBP33778 126 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 HIST1H2BDP58876 126 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 HIST1H2BCP62807 126 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 HIST2H2BEQ16778 126 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 RNASE13Q5GAN3 156 aaKnown RBP8.83□□□□□ -1
COL4A6-207ENST00000487645 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.83□□□□□ -1
COL4A6-207ENST00000487645 TEX43Q6ZNM6 134 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 CHCHD10Q8WYQ3 142 aaPredicted RBP8.83□□□□□ -1
COL4A6-207ENST00000487645 HIST1H2BHQ93079 126 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 AMELXQ99217 191 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 HIST1H2BNQ99877 126 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 HIST1H2BMQ99879 126 aa8.83□□□□□ -1
COL4A6-207ENST00000487645 EREGO14944 169 aa8.82□□□□□ -1
COL4A6-207ENST00000487645 HSBP1O75506 76 aa8.82□□□□□ -1
COL4A6-207ENST00000487645 PDZD11Q5EBL8 140 aa8.82□□□□□ -1
COL4A6-207ENST00000487645 A0A087WTM6 91 aa8.81□□□□□ -1
COL4A6-207ENST00000487645 TRAV13-1A0A0B4J241 112 aa8.81□□□□□ -1
COL4A6-207ENST00000487645 GAGE12HA6NDE8 117 aa8.81□□□□□ -1
COL4A6-207ENST00000487645 IFITM10A6NMD0 228 aa8.81□□□□□ -1
COL4A6-207ENST00000487645 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.81□□□□□ -1
COL4A6-207ENST00000487645 SERF1AO75920 110 aa8.81□□□□□ -1
COL4A6-207ENST00000487645 PMCHL1Q16048 86 aa8.81□□□□□ -1
COL4A6-207ENST00000487645 CD164L2Q6UWJ8 174 aa8.81□□□□□ -1
COL4A6-207ENST00000487645 C2orf88Q9BSF0 95 aa8.81□□□□□ -1
COL4A6-207ENST00000487645 ATP5LO75964 103 aa8.8□□□□□ -1
COL4A6-207ENST00000487645 LINC00310P59036 64 aa8.8□□□□□ -1
COL4A6-207ENST00000487645 FOXI1Q12951 378 aa8.8□□□□□ -1
COL4A6-207ENST00000487645 LINC00173Q6ZV60 143 aa8.8□□□□□ -1
COL4A6-207ENST00000487645 BAALCQ8WXS3 180 aa8.8□□□□□ -1
COL4A6-207ENST00000487645 XCL1P47992 114 aa8.79□□□□□ -1
COL4A6-207ENST00000487645 FAT2Q9NYQ8 4349 aa8.78□□□□□ -1
COL4A6-207ENST00000487645 A0A1B0GVY2 172 aa8.78□□□□□ -1
COL4A6-207ENST00000487645 NUPR1O60356 82 aa8.78□□□□□ -1
COL4A6-207ENST00000487645 UBE2D1P51668 147 aa8.78□□□□□ -1
COL4A6-207ENST00000487645 CTAG1AP78358 180 aa8.78□□□□□ -1
COL4A6-207ENST00000487645 C14orf177Q52M58 125 aa8.78□□□□□ -1
COL4A6-207ENST00000487645 CFAP161Q6P656 301 aa8.78□□□□□ -1
COL4A6-207ENST00000487645 FAM19A3Q7Z5A8 133 aa8.78□□□□□ -1
COL4A6-207ENST00000487645 FAM19A2Q8N3H0 131 aa8.78□□□□□ -1
COL4A6-207ENST00000487645 SEC11AP67812 179 aa8.77□□□□□ -1.01
COL4A6-207ENST00000487645 PMVKQ15126 192 aa8.77□□□□□ -1.01
COL4A6-207ENST00000487645 COA6Q5JTJ3 125 aaKnown RBP8.77□□□□□ -1.01
COL4A6-207ENST00000487645 LINC00242Q5T6M2 205 aa8.77□□□□□ -1.01
COL4A6-207ENST00000487645 ZC2HC1BQ5TFG8 222 aa8.77□□□□□ -1.01
COL4A6-207ENST00000487645 Q8N814 137 aa8.77□□□□□ -1.01
COL4A6-207ENST00000487645 CST9LQ9H4G1 147 aa8.77□□□□□ -1.01
COL4A6-207ENST00000487645 PGPEP1Q9NXJ5 209 aa8.77□□□□□ -1.01
COL4A6-207ENST00000487645 PKD1P98161 4303 aa8.76□□□□□ -1.01
COL4A6-207ENST00000487645 IGHV3OR16-9A0A0B4J2B5 98 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms