RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 AKAP13Q12802 2813 aa8.65□□□□□ -1.02
TRA2B-214ENST00000487615 HILS1P60008 231 aa8.65□□□□□ -1.02
TRA2B-214ENST00000487615 PRO0255Q9UI72 69 aa8.65□□□□□ -1.02
TRA2B-214ENST00000487615 ICOSQ9Y6W8 199 aa8.65□□□□□ -1.02
TRA2B-214ENST00000487615 MRPL23Q16540 153 aaKnown RBP8.65□□□□□ -1.03
TRA2B-214ENST00000487615 DEFB121Q5J5C9 76 aa8.64□□□□□ -1.03
TRA2B-214ENST00000487615 TEN1Q86WV5 123 aa8.64□□□□□ -1.03
TRA2B-214ENST00000487615 ANAPC13Q9BS18 74 aa8.64□□□□□ -1.03
TRA2B-214ENST00000487615 ESM1Q9NQ30 184 aa8.64□□□□□ -1.03
TRA2B-214ENST00000487615 MIAQ16674 131 aa8.64□□□□□ -1.03
TRA2B-214ENST00000487615 ANKRD29Q8N6D5 301 aa8.64□□□□□ -1.03
TRA2B-214ENST00000487615 LINC01620Q4KN68 170 aa8.64□□□□□ -1.03
TRA2B-214ENST00000487615 DSPP15924 2871 aaKnown RBP8.63□□□□□ -1.03
TRA2B-214ENST00000487615 ZNF561-AS1K7EIQ3 104 aa8.63□□□□□ -1.03
TRA2B-214ENST00000487615 DEFB4AO15263 64 aa8.63□□□□□ -1.03
TRA2B-214ENST00000487615 WFDC10AQ9H1F0 79 aa8.63□□□□□ -1.03
TRA2B-214ENST00000487615 INAFM2P0DMQ5 153 aa8.63□□□□□ -1.03
TRA2B-214ENST00000487615 SND1-IT1Q9HBX3 110 aa8.63□□□□□ -1.03
TRA2B-214ENST00000487615 SPTBN5Q9NRC6 3674 aaKnown RBP8.63□□□□□ -1.03
TRA2B-214ENST00000487615 A0A0B4J2C4 111 aa8.62□□□□□ -1.03
TRA2B-214ENST00000487615 INAFM1C9JVW0 142 aa8.62□□□□□ -1.03
TRA2B-214ENST00000487615 PLA2G2AP14555 144 aa8.62□□□□□ -1.03
TRA2B-214ENST00000487615 TRBV6-4A0A1B0GX49 114 aa8.62□□□□□ -1.03
TRA2B-214ENST00000487615 FAM19A4Q96LR4 140 aa8.62□□□□□ -1.03
TRA2B-214ENST00000487615 KIF25-AS1Q9Y6Z4 181 aa8.62□□□□□ -1.03
TRA2B-214ENST00000487615 COL6A3P12111 3177 aa8.62□□□□□ -1.03
TRA2B-214ENST00000487615 TIRAPP58753 221 aa8.62□□□□□ -1.03
TRA2B-214ENST00000487615 IGLV10-54A0A075B6I4 117 aa8.61□□□□□ -1.03
TRA2B-214ENST00000487615 LINC01546A6NGU7 62 aa8.61□□□□□ -1.03
TRA2B-214ENST00000487615 UBE2D4Q9Y2X8 147 aa8.61□□□□□ -1.03
TRA2B-214ENST00000487615 SMIM9A6NGZ8 99 aa8.61□□□□□ -1.03
TRA2B-214ENST00000487615 G3V4G9 280 aa8.61□□□□□ -1.03
TRA2B-214ENST00000487615 COX7A2LO14548 114 aa8.61□□□□□ -1.03
TRA2B-214ENST00000487615 GAGE2AQ6NT46 116 aa8.6□□□□□ -1.03
TRA2B-214ENST00000487615 SPEGQ15772 3267 aa8.6□□□□□ -1.03
TRA2B-214ENST00000487615 LY6G6DO95868 133 aa8.6□□□□□ -1.03
TRA2B-214ENST00000487615 TCL1BO95988 128 aa8.6□□□□□ -1.03
TRA2B-214ENST00000487615 FAM222AQ5U5X8 452 aa8.6□□□□□ -1.03
TRA2B-214ENST00000487615 TNRC18O15417 2968 aaPredicted RBP8.6□□□□□ -1.03
TRA2B-214ENST00000487615 IGLV4-69A0A075B6H9 119 aa8.6□□□□□ -1.03
TRA2B-214ENST00000487615 IGHV3-30P01768 117 aa8.6□□□□□ -1.03
TRA2B-214ENST00000487615 IGHV3-30-5P0DP03 117 aa8.6□□□□□ -1.03
TRA2B-214ENST00000487615 FOXI1Q12951 378 aa8.6□□□□□ -1.03
TRA2B-214ENST00000487615 H7C423 109 aa8.59□□□□□ -1.03
TRA2B-214ENST00000487615 Q8N2B8 174 aa8.59□□□□□ -1.03
TRA2B-214ENST00000487615 MIR7-3HGQ8N6C7 128 aa8.59□□□□□ -1.03
TRA2B-214ENST00000487615 LAMTOR3Q9UHA4 124 aa8.59□□□□□ -1.03
TRA2B-214ENST00000487615 MRPS36P82909 103 aaKnown RBP8.59□□□□□ -1.03
TRA2B-214ENST00000487615 PTH2Q96A98 100 aa8.58□□□□□ -1.04
TRA2B-214ENST00000487615 TRBV6-8A0A0A6YYG3 113 aa8.58□□□□□ -1.04
TRA2B-214ENST00000487615 LYRM9A8MSI8 78 aa8.58□□□□□ -1.04
TRA2B-214ENST00000487615 C1orf158Q8N1D5 194 aa8.57□□□□□ -1.04
TRA2B-214ENST00000487615 CENPEQ02224 2701 aa8.57□□□□□ -1.04
TRA2B-214ENST00000487615 A8MZ25 164 aa8.57□□□□□ -1.04
TRA2B-214ENST00000487615 NDUFA1O15239 70 aa8.57□□□□□ -1.04
TRA2B-214ENST00000487615 NDUFA7O95182 113 aa8.57□□□□□ -1.04
TRA2B-214ENST00000487615 IGLV1-51P01701 117 aa8.57□□□□□ -1.04
TRA2B-214ENST00000487615 LINC00315P59091 139 aa8.57□□□□□ -1.04
TRA2B-214ENST00000487615 LINC00482Q8N8I6 264 aa8.57□□□□□ -1.04
TRA2B-214ENST00000487615 TRBV10-2A0A0K0K1G8 114 aa8.57□□□□□ -1.04
TRA2B-214ENST00000487615 BAALC-AS2P0C853 105 aa8.57□□□□□ -1.04
TRA2B-214ENST00000487615 IGHV3-33P01772 117 aa8.56□□□□□ -1.04
TRA2B-214ENST00000487615 CLEC2BQ92478 149 aa8.56□□□□□ -1.04
TRA2B-214ENST00000487615 FRYLO94915 3013 aa8.56□□□□□ -1.04
TRA2B-214ENST00000487615 H3BT86 120 aa8.56□□□□□ -1.04
TRA2B-214ENST00000487615 UBE2D1P51668 147 aa8.56□□□□□ -1.04
TRA2B-214ENST00000487615 DPH3Q96FX2 82 aa8.56□□□□□ -1.04
TRA2B-214ENST00000487615 H0YGX0 51 aa8.55□□□□□ -1.04
TRA2B-214ENST00000487615 UBE2D3P61077 147 aa8.55□□□□□ -1.04
TRA2B-214ENST00000487615 UBE2D2P62837 147 aa8.55□□□□□ -1.04
TRA2B-214ENST00000487615 SMR3AQ99954 134 aa8.55□□□□□ -1.04
TRA2B-214ENST00000487615 BEAN1Q3B7T3 259 aa8.55□□□□□ -1.04
TRA2B-214ENST00000487615 CXCL5P42830 114 aa8.55□□□□□ -1.04
TRA2B-214ENST00000487615 C16orf95Q9H693 158 aa8.55□□□□□ -1.04
TRA2B-214ENST00000487615 LOC100131303A0A0U1RQF7 123 aa8.54□□□□□ -1.04
TRA2B-214ENST00000487615 TRAV26-1A0A087WT03 109 aa8.54□□□□□ -1.04
TRA2B-214ENST00000487615 RBX1P62877 108 aa8.54□□□□□ -1.04
TRA2B-214ENST00000487615 LINC00308Q8TCZ7 52 aa8.54□□□□□ -1.04
TRA2B-214ENST00000487615 FSHBP01225 129 aa8.54□□□□□ -1.04
TRA2B-214ENST00000487615 UBE2DNLQ8IWF7 75 aa8.54□□□□□ -1.04
TRA2B-214ENST00000487615 CHCHD7Q9BUK0 85 aa8.54□□□□□ -1.04
TRA2B-214ENST00000487615 TIMM17BO60830 172 aa8.54□□□□□ -1.04
TRA2B-214ENST00000487615 RBMY1FQ15415 496 aaKnown RBP8.54□□□□□ -1.04
TRA2B-214ENST00000487615 UFSP1Q6NVU6 142 aa8.54□□□□□ -1.04
TRA2B-214ENST00000487615 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
TRA2B-214ENST00000487615 KLK12Q9UKR0 248 aa8.53□□□□□ -1.04
TRA2B-214ENST00000487615 C15orf53Q8NAA6 179 aa8.53□□□□□ -1.04
TRA2B-214ENST00000487615 AMELXQ99217 191 aa8.53□□□□□ -1.04
TRA2B-214ENST00000487615 C1orf43Q9BWL3 253 aa8.53□□□□□ -1.04
TRA2B-214ENST00000487615 SPANXDQ9BXN6 97 aa8.53□□□□□ -1.04
TRA2B-214ENST00000487615 SPANXCQ9NY87 97 aa8.53□□□□□ -1.04
TRA2B-214ENST00000487615 Q6ZSN1 163 aa8.52□□□□□ -1.05
TRA2B-214ENST00000487615 CLUHP3Q96NS8 147 aa8.52□□□□□ -1.05
TRA2B-214ENST00000487615 EDA2RQ9HAV5 297 aa8.52□□□□□ -1.05
TRA2B-214ENST00000487615 LINC00269Q8N2A0 174 aa8.52□□□□□ -1.05
TRA2B-214ENST00000487615 IGKV2D-24A0A075B6R9 120 aa8.52□□□□□ -1.05
TRA2B-214ENST00000487615 TRBV30A0A0K0K1B3 111 aa8.52□□□□□ -1.05
TRA2B-214ENST00000487615 TRIAP1O43715 76 aa8.52□□□□□ -1.05
TRA2B-214ENST00000487615 SPAG11BQ08648 103 aa8.52□□□□□ -1.05
TRA2B-214ENST00000487615 CDC42SE2Q9NRR3 84 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms