RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 KRTAP10-2P60368 255 aa12.98□□□□□ -0.33
SEC22A-208ENST00000487572 RPL39P62891 51 aaKnown RBP12.98□□□□□ -0.33
SEC22A-208ENST00000487572 YPEL4Q96NS1 127 aa12.98□□□□□ -0.33
SEC22A-208ENST00000487572 ALKBH7Q9BT30 221 aaPredicted RBP12.98□□□□□ -0.33
SEC22A-208ENST00000487572 UBE2D4Q9Y2X8 147 aa12.98□□□□□ -0.33
SEC22A-208ENST00000487572 FUSP35637 526 aaKnown RBP eCLIP12.97□□□□□ -0.33
SEC22A-208ENST00000487572 IFI27P40305 119 aaPredicted RBP12.97□□□□□ -0.33
SEC22A-208ENST00000487572 SMAGPQ0VAQ4 97 aa12.97□□□□□ -0.33
SEC22A-208ENST00000487572 WFDC2Q14508 124 aa12.97□□□□□ -0.33
SEC22A-208ENST00000487572 PKD1P98161 4303 aa12.97□□□□□ -0.33
SEC22A-208ENST00000487572 ZNF664Q8N3J9 261 aa12.96□□□□□ -0.33
SEC22A-208ENST00000487572 NXT2Q9NPJ8 142 aaKnown RBP12.96□□□□□ -0.33
SEC22A-208ENST00000487572 TRAV8-4A0A0B4J246 113 aa12.95□□□□□ -0.34
SEC22A-208ENST00000487572 RNASE13Q5GAN3 156 aaKnown RBP12.95□□□□□ -0.34
SEC22A-208ENST00000487572 CDC42SE2Q9NRR3 84 aa12.95□□□□□ -0.34
SEC22A-208ENST00000487572 PRSS3P2Q8NHM4 247 aa12.94□□□□□ -0.34
SEC22A-208ENST00000487572 C16orf90A8MZG2 172 aa12.93□□□□□ -0.34
SEC22A-208ENST00000487572 ORMDL2Q53FV1 153 aa12.93□□□□□ -0.34
SEC22A-208ENST00000487572 KRTAP26-1Q6PEX3 210 aa12.93□□□□□ -0.34
SEC22A-208ENST00000487572 Q6ZUT4 128 aa12.93□□□□□ -0.34
SEC22A-208ENST00000487572 Q8N814 137 aa12.93□□□□□ -0.34
SEC22A-208ENST00000487572 TIMM21Q9BVV7 248 aa12.93□□□□□ -0.34
SEC22A-208ENST00000487572 SPANXA1Q9NS26 97 aa12.92□□□□□ -0.34
SEC22A-208ENST00000487572 CSDC2Q9Y534 153 aaKnown RBP12.92□□□□□ -0.34
SEC22A-208ENST00000487572 GAGE12HA6NDE8 117 aa12.91□□□□□ -0.34
SEC22A-208ENST00000487572 CHCHD10Q8WYQ3 142 aaPredicted RBP12.91□□□□□ -0.34
SEC22A-208ENST00000487572 OPRPNQ99935 248 aaPredicted RBP12.91□□□□□ -0.34
SEC22A-208ENST00000487572 DNAH11Q96DT5 4516 aa12.91□□□□□ -0.34
SEC22A-208ENST00000487572 LINC00959A0A1B0GUT2 108 aa12.9□□□□□ -0.34
SEC22A-208ENST00000487572 K7EMI3 77 aa12.9□□□□□ -0.34
SEC22A-208ENST00000487572 C2orf66Q6UXQ4 117 aa12.9□□□□□ -0.34
SEC22A-208ENST00000487572 PGPEP1Q9NXJ5 209 aa12.9□□□□□ -0.34
SEC22A-208ENST00000487572 CYSLTR1Q9Y271 337 aa12.9□□□□□ -0.34
SEC22A-208ENST00000487572 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.89□□□□□ -0.35
SEC22A-208ENST00000487572 USP17L23D6RBM5 183 aa12.89□□□□□ -0.35
SEC22A-208ENST00000487572 SCO1O75880 301 aa12.88□□□□□ -0.35
SEC22A-208ENST00000487572 XCL1P47992 114 aa12.88□□□□□ -0.35
SEC22A-208ENST00000487572 SS18Q15532 418 aa12.88□□□□□ -0.35
SEC22A-208ENST00000487572 FA2HQ7L5A8 372 aa12.88□□□□□ -0.35
SEC22A-208ENST00000487572 IGLV5-52A0A0A0MRZ9 124 aa12.87□□□□□ -0.35
SEC22A-208ENST00000487572 TRAV13-1A0A0B4J241 112 aa12.87□□□□□ -0.35
SEC22A-208ENST00000487572 CCL25O15444 150 aa12.87□□□□□ -0.35
SEC22A-208ENST00000487572 CDPF1Q6NVV7 123 aa12.87□□□□□ -0.35
SEC22A-208ENST00000487572 C18orf32Q8TCD1 76 aa12.87□□□□□ -0.35
SEC22A-208ENST00000487572 FAM104AQ969W3 186 aa12.87□□□□□ -0.35
SEC22A-208ENST00000487572 PKHD1P08F94 4074 aa12.86□□□□□ -0.35
SEC22A-208ENST00000487572 BIRC6Q9NR09 4857 aa12.86□□□□□ -0.35
SEC22A-208ENST00000487572 MRPS36P82909 103 aaKnown RBP12.86□□□□□ -0.35
SEC22A-208ENST00000487572 NTN5Q8WTR8 489 aaPredicted RBP12.86□□□□□ -0.35
SEC22A-208ENST00000487572 C14orf177Q52M58 125 aa12.85□□□□□ -0.35
SEC22A-208ENST00000487572 PYGO1Q9Y3Y4 419 aa12.85□□□□□ -0.35
SEC22A-208ENST00000487572 IGLV4-3A0A075B6K6 122 aa12.84□□□□□ -0.35
SEC22A-208ENST00000487572 G0S2P27469 103 aa12.84□□□□□ -0.35
SEC22A-208ENST00000487572 LINC01546A6NGU7 62 aa12.83□□□□□ -0.36
SEC22A-208ENST00000487572 IFITM10A6NMD0 228 aa12.83□□□□□ -0.36
SEC22A-208ENST00000487572 COLCA2A8K830 154 aa12.83□□□□□ -0.36
SEC22A-208ENST00000487572 C1orf196B1AJZ1 125 aa12.83□□□□□ -0.36
SEC22A-208ENST00000487572 FOXI1Q12951 378 aa12.83□□□□□ -0.36
SEC22A-208ENST00000487572 TMEM141Q96I45 108 aa12.83□□□□□ -0.36
SEC22A-208ENST00000487572 TRGC2P03986 189 aa12.82□□□□□ -0.36
SEC22A-208ENST00000487572 PRSS1P07477 247 aa12.82□□□□□ -0.36
SEC22A-208ENST00000487572 TOMM6Q96B49 74 aa12.82□□□□□ -0.36
SEC22A-208ENST00000487572 ATP6V1G1O75348 118 aa12.81□□□□□ -0.36
SEC22A-208ENST00000487572 CD164L2Q6UWJ8 174 aa12.81□□□□□ -0.36
SEC22A-208ENST00000487572 Q6ZN92 141 aa12.81□□□□□ -0.36
SEC22A-208ENST00000487572 AP5S1Q9NUS5 200 aa12.81□□□□□ -0.36
SEC22A-208ENST00000487572 hDV102S1A0JD36 115 aa12.8□□□□□ -0.36
SEC22A-208ENST00000487572 IGIPA6NJ69 53 aa12.8□□□□□ -0.36
SEC22A-208ENST00000487572 LINC00614P0C842 121 aa12.8□□□□□ -0.36
SEC22A-208ENST00000487572 GCSHP23434 173 aa12.8□□□□□ -0.36
SEC22A-208ENST00000487572 ZC2HC1BQ5TFG8 222 aa12.8□□□□□ -0.36
SEC22A-208ENST00000487572 TEX43Q6ZNM6 134 aa12.8□□□□□ -0.36
SEC22A-208ENST00000487572 URB1-AS1Q96HZ7 61 aa12.8□□□□□ -0.36
SEC22A-208ENST00000487572 SCGB3A1Q96QR1 104 aa12.8□□□□□ -0.36
SEC22A-208ENST00000487572 CFAP161Q6P656 301 aa12.79□□□□□ -0.36
SEC22A-208ENST00000487572 C15orf56Q8N910 161 aa12.79□□□□□ -0.36
SEC22A-208ENST00000487572 KRTAP10-1P60331 282 aa12.78□□□□□ -0.36
SEC22A-208ENST00000487572 RAB5BP61020 215 aa12.78□□□□□ -0.36
SEC22A-208ENST00000487572 HIGD2BQ4VC39 106 aa12.78□□□□□ -0.36
SEC22A-208ENST00000487572 C2orf88Q9BSF0 95 aa12.78□□□□□ -0.36
SEC22A-208ENST00000487572 VCX2Q9H322 139 aa12.78□□□□□ -0.36
SEC22A-208ENST00000487572 DYNC1H1Q14204 4646 aaKnown RBP12.78□□□□□ -0.36
SEC22A-208ENST00000487572 S100A1P23297 94 aa12.77□□□□□ -0.37
SEC22A-208ENST00000487572 PMCHL1Q16048 86 aa12.77□□□□□ -0.37
SEC22A-208ENST00000487572 LINC01620Q4KN68 170 aa12.77□□□□□ -0.37
SEC22A-208ENST00000487572 ERASQ7Z444 233 aa12.77□□□□□ -0.37
SEC22A-208ENST00000487572 TIMM17AQ99595 171 aa12.77□□□□□ -0.37
SEC22A-208ENST00000487572 COX7A2LO14548 114 aa12.76□□□□□ -0.37
SEC22A-208ENST00000487572 NPSP0C0P6 89 aa12.76□□□□□ -0.37
SEC22A-208ENST00000487572 MALP21145 153 aa12.76□□□□□ -0.37
SEC22A-208ENST00000487572 LINC00173Q6ZV60 143 aa12.76□□□□□ -0.37
SEC22A-208ENST00000487572 C5orf38Q86SI9 138 aa12.76□□□□□ -0.37
SEC22A-208ENST00000487572 PAPPA-AS1Q5QFB9 102 aa12.75□□□□□ -0.37
SEC22A-208ENST00000487572 AMELXQ99217 191 aa12.75□□□□□ -0.37
SEC22A-208ENST00000487572 DNAH5Q8TE73 4624 aa12.74□□□□□ -0.37
SEC22A-208ENST00000487572 IGHV1-58A0A0C4DH39 117 aa12.74□□□□□ -0.37
SEC22A-208ENST00000487572 LINC01549A6NIU2 74 aa12.74□□□□□ -0.37
SEC22A-208ENST00000487572 BAGE3Q86Y29 109 aa12.74□□□□□ -0.37
SEC22A-208ENST00000487572 A0A096LNJ9 63 aa12.73□□□□□ -0.37
SEC22A-208ENST00000487572 HBDP02042 147 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms