RNA–Protein interactions for RNA: ENST00000487240.3

SOX2-OT-210, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 751 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-210ENST00000487240 UBE2L6O14933 153 aa4.19□□□□□ -1.74
SOX2-OT-210ENST00000487240 GATCO43716 136 aaKnown RBP4.19□□□□□ -1.74
SOX2-OT-210ENST00000487240 FOXA3P55318 350 aaPredicted RBP4.19□□□□□ -1.74
SOX2-OT-210ENST00000487240 RPL24P83731 157 aaKnown RBP4.19□□□□□ -1.74
SOX2-OT-210ENST00000487240 REG3AQ06141 175 aa4.19□□□□□ -1.74
SOX2-OT-210ENST00000487240 GTSF1Q8WW33 167 aa4.19□□□□□ -1.74
SOX2-OT-210ENST00000487240 PGLYRP4Q96LB8 373 aa4.19□□□□□ -1.74
SOX2-OT-210ENST00000487240 NIT2Q9NQR4 276 aa4.19□□□□□ -1.74
SOX2-OT-210ENST00000487240 IGLV4-60A0A075B6I1 120 aa4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 IGKV3OR2-268A0A0C4DH90 116 aa4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 A0A1B0GUV1 79 aa4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 PRSS1P07477 247 aa4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 PNRC1Q12796 327 aaPredicted RBP4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 COTL1Q14019 142 aa4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 KRTAP26-1Q6PEX3 210 aa4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 SMIM15Q7Z3B0 74 aa4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 GATD1Q8NB37 220 aa4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 C20orf203Q8NBC4 194 aa4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 RPL39LQ96EH5 51 aaKnown RBP4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 CHAC1Q9BUX1 264 aa4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 EIF5A2Q9GZV4 153 aaKnown RBP4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 GFRA4Q9GZZ7 299 aa4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 PRR34Q9NV39 138 aa4.18□□□□□ -1.74
SOX2-OT-210ENST00000487240 TMEM250H0YL14 139 aa4.17□□□□□ -1.74
SOX2-OT-210ENST00000487240 CIRBP-AS1Q8TBR5 109 aa4.17□□□□□ -1.74
SOX2-OT-210ENST00000487240 SMIM7Q9BQ49 75 aa4.17□□□□□ -1.74
SOX2-OT-210ENST00000487240 CNFNQ9BYD5 112 aa4.17□□□□□ -1.74
SOX2-OT-210ENST00000487240 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.16□□□□□ -1.74
SOX2-OT-210ENST00000487240 IGLV5-45A0A087WSX0 123 aa4.16□□□□□ -1.74
SOX2-OT-210ENST00000487240 A0A1B0GVG6 124 aa4.16□□□□□ -1.74
SOX2-OT-210ENST00000487240 IGKV2-29A2NJV5 120 aaPredicted RBP4.16□□□□□ -1.74
SOX2-OT-210ENST00000487240 A8MWL6 223 aa4.16□□□□□ -1.74
SOX2-OT-210ENST00000487240 APCSP02743 223 aa4.16□□□□□ -1.74
SOX2-OT-210ENST00000487240 AMMECR1LQ6DCA0 310 aa4.16□□□□□ -1.74
SOX2-OT-210ENST00000487240 RNASEKQ6P5S7 137 aaKnown RBP4.16□□□□□ -1.74
SOX2-OT-210ENST00000487240 FAM231DQ6ZW35 169 aa4.16□□□□□ -1.74
SOX2-OT-210ENST00000487240 LYPD6BQ8NI32 183 aa4.16□□□□□ -1.74
SOX2-OT-210ENST00000487240 BORCS7Q96B45 105 aa4.16□□□□□ -1.74
SOX2-OT-210ENST00000487240 TRAV8-4A0A0B4J246 113 aa4.15□□□□□ -1.75
SOX2-OT-210ENST00000487240 SDHAF1A6NFY7 115 aa4.15□□□□□ -1.75
SOX2-OT-210ENST00000487240 ZNF727A8MUV8 499 aa4.15□□□□□ -1.75
SOX2-OT-210ENST00000487240 GAS8-AS1O95177 125 aa4.15□□□□□ -1.75
SOX2-OT-210ENST00000487240 PMCHP20382 165 aa4.15□□□□□ -1.75
SOX2-OT-210ENST00000487240 LINC01551Q86U37 167 aa4.15□□□□□ -1.75
SOX2-OT-210ENST00000487240 FAM210AQ96ND0 272 aa4.15□□□□□ -1.75
SOX2-OT-210ENST00000487240 A0A1B0GUT8 65 aa4.14□□□□□ -1.75
SOX2-OT-210ENST00000487240 HIGD1CA8MV81 97 aa4.14□□□□□ -1.75
SOX2-OT-210ENST00000487240 PANO1I0J062 215 aa4.14□□□□□ -1.75
SOX2-OT-210ENST00000487240 NCR2O95944 276 aa4.14□□□□□ -1.75
SOX2-OT-210ENST00000487240 SRP19P09132 144 aaKnown RBP4.14□□□□□ -1.75
SOX2-OT-210ENST00000487240 FGF6P10767 208 aa4.14□□□□□ -1.75
SOX2-OT-210ENST00000487240 HIGD2BQ4VC39 106 aa4.14□□□□□ -1.75
SOX2-OT-210ENST00000487240 TEX261Q6UWH6 196 aa4.14□□□□□ -1.75
SOX2-OT-210ENST00000487240 C9orf163Q8N9P6 203 aa4.14□□□□□ -1.75
SOX2-OT-210ENST00000487240 TSKUQ8WUA8 353 aa4.14□□□□□ -1.75
SOX2-OT-210ENST00000487240 TMEM242Q9NWH2 141 aa4.14□□□□□ -1.75
SOX2-OT-210ENST00000487240 IGHV3-64A0A075B6Q5 118 aa4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 SMKR1H3BMG3 65 aa4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 I3L3M4 83 aa4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 CHTF8P0CG12 524 aa4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 RPS10P46783 165 aaKnown RBP4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 RPL37AP61513 92 aaKnown RBP4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 ADIRFQ15847 76 aa4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 SDIM1Q6ZPB5 146 aa4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 AMN1Q8IY45 258 aa4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 C15orf56Q8N910 161 aa4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 CHCHD10Q8WYQ3 142 aaPredicted RBP4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 DPH3Q96FX2 82 aa4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 RNF185Q96GF1 192 aa4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 ST20Q9HBF5 79 aa4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 OSTCQ9NRP0 149 aa4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 LRP1Q07954 4544 aaKnown RBP4.13□□□□□ -1.75
SOX2-OT-210ENST00000487240 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 TRBV6-5A0A0K0K1A5 114 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 FAM231BA6NCW3 169 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 C9JQL5 133 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 TSHBP01222 138 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 RAB4AP20338 218 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 XCL1P47992 114 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 KRTAP10-4P60372 401 aaPredicted RBP4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 CNBPP62633 177 aaKnown RBP4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 RPL23P62829 140 aaKnown RBP4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 RIGQ13278 110 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 TMEM241Q24JQ0 296 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 NUP35Q8NFH5 326 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 OR5A1Q8NGJ0 315 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 ISOC2Q96AB3 205 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 TMEM101Q96IK0 257 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 BTF3L4Q96K17 158 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 TMEM191AQ9H0A3 160 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 V9GYV3 84 aa4.12□□□□□ -1.75
SOX2-OT-210ENST00000487240 FAT3Q8TDW7 4589 aa4.11□□□□□ -1.75
SOX2-OT-210ENST00000487240 KRTAP29-1A8MX34 341 aaPredicted RBP4.11□□□□□ -1.75
SOX2-OT-210ENST00000487240 H7C423 109 aa4.11□□□□□ -1.75
SOX2-OT-210ENST00000487240 FCER1GP30273 86 aa4.11□□□□□ -1.75
SOX2-OT-210ENST00000487240 MRAP2Q96G30 205 aa4.11□□□□□ -1.75
SOX2-OT-210ENST00000487240 NAT8BQ9UHF3 227 aa4.11□□□□□ -1.75
SOX2-OT-210ENST00000487240 PKHD1L1Q86WI1 4243 aa4.1□□□□□ -1.75
SOX2-OT-210ENST00000487240 IGKV2-24A0A0C4DH68 120 aa4.1□□□□□ -1.75
SOX2-OT-210ENST00000487240 LINC00959A0A1B0GUT2 108 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms