RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 HTN3P15516 51 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 ZNF25P17030 456 aaPredicted RBP4.31□□□□□ -1.72
VAMP3-203ENST00000487194 DDTP30046 118 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 MAJINQ3KP22 176 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 AMMECR1LQ6DCA0 310 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 NTM-AS1Q6ZSK4 140 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 C11orf45Q8TAV5 145 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 MRAPQ8TCY5 172 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 AMELXQ99217 191 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 MIEN1Q9BRT3 115 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 UQCR10Q9UDW1 63 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 ICOSQ9Y6W8 199 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 A0A0J9YY99 117 aa4.3□□□□□ -1.72
VAMP3-203ENST00000487194 HERVK_113P61574 105 aa4.3□□□□□ -1.72
VAMP3-203ENST00000487194 ZC2HC1BQ5TFG8 222 aa4.3□□□□□ -1.72
VAMP3-203ENST00000487194 OR5A1Q8NGJ0 315 aa4.3□□□□□ -1.72
VAMP3-203ENST00000487194 B9D2Q9BPU9 175 aa4.3□□□□□ -1.72
VAMP3-203ENST00000487194 IGLV4-69A0A075B6H9 119 aa4.29□□□□□ -1.72
VAMP3-203ENST00000487194 COX8AP10176 69 aa4.29□□□□□ -1.72
VAMP3-203ENST00000487194 SEC11AP67812 179 aa4.29□□□□□ -1.72
VAMP3-203ENST00000487194 ANKRD39Q53RE8 183 aa4.29□□□□□ -1.72
VAMP3-203ENST00000487194 SLC25A34Q6PIV7 304 aa4.29□□□□□ -1.72
VAMP3-203ENST00000487194 CEMP1Q6PRD7 247 aaPredicted RBP4.29□□□□□ -1.72
VAMP3-203ENST00000487194 Q6ZTC4 211 aa4.29□□□□□ -1.72
VAMP3-203ENST00000487194 NFE4Q86UQ8 179 aa4.29□□□□□ -1.72
VAMP3-203ENST00000487194 STPG4Q8N801 248 aa4.29□□□□□ -1.72
VAMP3-203ENST00000487194 OPRPNQ99935 248 aaPredicted RBP4.29□□□□□ -1.72
VAMP3-203ENST00000487194 CHCHD5Q9BSY4 110 aa4.29□□□□□ -1.72
VAMP3-203ENST00000487194 CHAC1Q9BUX1 264 aa4.29□□□□□ -1.72
VAMP3-203ENST00000487194 CDC42SE2Q9NRR3 84 aa4.29□□□□□ -1.72
VAMP3-203ENST00000487194 DEFB131BA0A096LNP1 70 aa4.28□□□□□ -1.72
VAMP3-203ENST00000487194 TRAV10A0A0B4J240 114 aa4.28□□□□□ -1.72
VAMP3-203ENST00000487194 A0A1B0GUV1 79 aa4.28□□□□□ -1.72
VAMP3-203ENST00000487194 TINCRA0A1B0GVN0 87 aa4.28□□□□□ -1.72
VAMP3-203ENST00000487194 C11orf86A6NJI1 115 aa4.28□□□□□ -1.72
VAMP3-203ENST00000487194 DLEU1O43261 78 aa4.28□□□□□ -1.72
VAMP3-203ENST00000487194 NHLRC4P0CG21 123 aaPredicted RBP4.28□□□□□ -1.72
VAMP3-203ENST00000487194 NMUP48645 174 aa4.28□□□□□ -1.72
VAMP3-203ENST00000487194 TIRAPP58753 221 aa4.28□□□□□ -1.72
VAMP3-203ENST00000487194 NANOS2P60321 138 aaKnown RBP4.28□□□□□ -1.72
VAMP3-203ENST00000487194 GAGE6Q13070 117 aa4.28□□□□□ -1.72
VAMP3-203ENST00000487194 TMEM170BQ5T4T1 132 aa4.28□□□□□ -1.72
VAMP3-203ENST00000487194 Q6ZUT4 128 aa4.28□□□□□ -1.72
VAMP3-203ENST00000487194 FAM104AQ969W3 186 aa4.28□□□□□ -1.72
VAMP3-203ENST00000487194 C14orf144Q96I85 54 aa4.28□□□□□ -1.72
VAMP3-203ENST00000487194 A0A096LPF7 62 aa4.27□□□□□ -1.73
VAMP3-203ENST00000487194 A0A0J9YXV3 536 aa4.27□□□□□ -1.73
VAMP3-203ENST00000487194 LINC00587B1AMM8 73 aa4.27□□□□□ -1.73
VAMP3-203ENST00000487194 E9PLD3 99 aa4.27□□□□□ -1.73
VAMP3-203ENST00000487194 TMEM262E9PQX1 116 aa4.27□□□□□ -1.73
VAMP3-203ENST00000487194 H3BRM9 83 aa4.27□□□□□ -1.73
VAMP3-203ENST00000487194 SIVA1O15304 175 aa4.27□□□□□ -1.73
VAMP3-203ENST00000487194 UBE2D1P51668 147 aa4.27□□□□□ -1.73
VAMP3-203ENST00000487194 HNRNPA3P51991 378 aaKnown RBP4.27□□□□□ -1.73
VAMP3-203ENST00000487194 HERVK_113P63121 156 aa4.27□□□□□ -1.73
VAMP3-203ENST00000487194 DEFA6Q01524 100 aa4.27□□□□□ -1.73
VAMP3-203ENST00000487194 LELP1Q5T871 98 aa4.27□□□□□ -1.73
VAMP3-203ENST00000487194 FAM19A3Q7Z5A8 133 aa4.27□□□□□ -1.73
VAMP3-203ENST00000487194 BOD1L2Q8IYS8 172 aa4.27□□□□□ -1.73
VAMP3-203ENST00000487194 GEMIN7Q9H840 131 aaKnown RBP4.27□□□□□ -1.73
VAMP3-203ENST00000487194 MRPS16Q9Y3D3 137 aaKnown RBP4.27□□□□□ -1.73
VAMP3-203ENST00000487194 TENM3Q9P273 2699 aa4.26□□□□□ -1.73
VAMP3-203ENST00000487194 TRAV8-6A0A0B4J262 113 aa4.26□□□□□ -1.73
VAMP3-203ENST00000487194 TMEM223A0PJW6 202 aa4.26□□□□□ -1.73
VAMP3-203ENST00000487194 CCL25O15444 150 aa4.26□□□□□ -1.73
VAMP3-203ENST00000487194 ZNF22P17026 224 aaPredicted RBP4.26□□□□□ -1.73
VAMP3-203ENST00000487194 RBX1P62877 108 aa4.26□□□□□ -1.73
VAMP3-203ENST00000487194 RNASE13Q5GAN3 156 aaKnown RBP4.26□□□□□ -1.73
VAMP3-203ENST00000487194 LYPD5Q6UWN5 251 aa4.26□□□□□ -1.73
VAMP3-203ENST00000487194 C15orf53Q8NAA6 179 aa4.26□□□□□ -1.73
VAMP3-203ENST00000487194 DYNC2H1Q8NCM8 4307 aaKnown RBP4.25□□□□□ -1.73
VAMP3-203ENST00000487194 IGLV5-45A0A087WSX0 123 aa4.25□□□□□ -1.73
VAMP3-203ENST00000487194 IGKV2D-26A0A0A0MRZ7 120 aa4.25□□□□□ -1.73
VAMP3-203ENST00000487194 TRAV13-1A0A0B4J241 112 aa4.25□□□□□ -1.73
VAMP3-203ENST00000487194 LEPROTO15243 131 aa4.25□□□□□ -1.73
VAMP3-203ENST00000487194 TCTAP57738 103 aa4.25□□□□□ -1.73
VAMP3-203ENST00000487194 LINC00242Q5T6M2 205 aa4.25□□□□□ -1.73
VAMP3-203ENST00000487194 PCP2Q8IVA1 136 aa4.25□□□□□ -1.73
VAMP3-203ENST00000487194 LINC00469Q8N7U9 141 aa4.25□□□□□ -1.73
VAMP3-203ENST00000487194 PLEKHB2Q96CS7 222 aa4.25□□□□□ -1.73
VAMP3-203ENST00000487194 IGLV4-60A0A075B6I1 120 aa4.24□□□□□ -1.73
VAMP3-203ENST00000487194 IGHV1-58A0A0C4DH39 117 aa4.24□□□□□ -1.73
VAMP3-203ENST00000487194 MYMXA0A1B0GTQ4 84 aa4.24□□□□□ -1.73
VAMP3-203ENST00000487194 M0R143 59 aa4.24□□□□□ -1.73
VAMP3-203ENST00000487194 LGALS3P17931 250 aaKnown RBP4.24□□□□□ -1.73
VAMP3-203ENST00000487194 CTAG1AP78358 180 aa4.24□□□□□ -1.73
VAMP3-203ENST00000487194 SS18Q15532 418 aa4.24□□□□□ -1.73
VAMP3-203ENST00000487194 MPV17L2Q567V2 206 aa4.24□□□□□ -1.73
VAMP3-203ENST00000487194 HIGD1BQ9P298 99 aa4.24□□□□□ -1.73
VAMP3-203ENST00000487194 LINC00959A0A1B0GUT2 108 aa4.23□□□□□ -1.73
VAMP3-203ENST00000487194 ZNF815PA8K554 130 aa4.23□□□□□ -1.73
VAMP3-203ENST00000487194 J3QQQ9 107 aa4.23□□□□□ -1.73
VAMP3-203ENST00000487194 ANGP03950 147 aaKnown RBP4.23□□□□□ -1.73
VAMP3-203ENST00000487194 LBHQ53QV2 105 aaPredicted RBP4.23□□□□□ -1.73
VAMP3-203ENST00000487194 C2orf91Q6ZV80 131 aa4.23□□□□□ -1.73
VAMP3-203ENST00000487194 CDKN2A-AS1Q9UH64 79 aa4.23□□□□□ -1.73
VAMP3-203ENST00000487194 PRKDCP78527 4128 aaKnown RBP4.22□□□□□ -1.73
VAMP3-203ENST00000487194 IGKV3OR2-268A0A0C4DH90 116 aa4.22□□□□□ -1.73
VAMP3-203ENST00000487194 IGHV3-30-3P0DP02 117 aa4.22□□□□□ -1.73
VAMP3-203ENST00000487194 CCL18P55774 89 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms