RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 RNF185Q96GF1 192 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 FMC1Q96HJ9 113 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 TCEAL7Q9BRU2 100 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 CHCHD5Q9BSY4 110 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 ANAPC11Q9NYG5 84 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 VAX2Q9UIW0 290 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 TRBV25-1A0A075B6N4 114 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 IGHV3-64A0A075B6Q5 118 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 TMSB15BA0A087X1C1 80 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 BORCS7-ASMTA0A0B4J1R7 106 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 TRAV8-4A0A0B4J246 113 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 SNAI2O43623 268 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 LTAP01374 205 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 P01737 135 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 S100A9P06702 114 aaKnown RBP2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 CXCL1P09341 107 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 GZMBP10144 247 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 UBE2G1P62253 170 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 RBX1P62877 108 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 ZNF56Q15929 161 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 ZNF726P1Q15940 193 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 IQCJQ1A5X6 159 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 REG3GQ6UW15 175 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 NTM-AS1Q6ZSK4 140 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 LINC00269Q8N2A0 174 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 INO80EQ8NBZ0 244 aaPredicted RBP2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 OR10AG1Q8NH19 301 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 DPH3Q96FX2 82 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 C2orf48Q96LS8 159 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 LINC01600Q96MT4 127 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 ZNF471Q9BX82 626 aaPredicted RBP2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 LRP2P98164 4655 aa2.47□□□□□ -2.01
SNRNP40-205ENST00000486941 OR5AL1P0C617 328 aa2.46□□□□□ -2.02
SNRNP40-205ENST00000486941 REG3AQ06141 175 aa2.46□□□□□ -2.02
SNRNP40-205ENST00000486941 AKR1C8PQ5T2L2 129 aa2.46□□□□□ -2.02
SNRNP40-205ENST00000486941 SPANXN1Q5VSR9 72 aa2.46□□□□□ -2.02
SNRNP40-205ENST00000486941 RPL7L1Q6DKI1 246 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-205ENST00000486941 PET117Q6UWS5 81 aa2.46□□□□□ -2.02
SNRNP40-205ENST00000486941 STOML3Q8TAV4 291 aa2.46□□□□□ -2.02
SNRNP40-205ENST00000486941 SPACA4Q8TDM5 124 aa2.46□□□□□ -2.02
SNRNP40-205ENST00000486941 C7orf33Q8WU49 177 aa2.46□□□□□ -2.02
SNRNP40-205ENST00000486941 DERL1Q9BUN8 251 aa2.46□□□□□ -2.02
SNRNP40-205ENST00000486941 DPH3P1Q9H4G8 78 aa2.46□□□□□ -2.02
SNRNP40-205ENST00000486941 PLAC8Q9NZF1 115 aa2.46□□□□□ -2.02
SNRNP40-205ENST00000486941 ALG5Q9Y673 324 aa2.46□□□□□ -2.02
SNRNP40-205ENST00000486941 TNXBP22105 4242 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 IGLV10-54A0A075B6I4 117 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 IGHV1-24A0A0C4DH33 117 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 MUC21A0A0G2JKD1 596 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 MUC21A0A140T8X8 626 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 A4D1N5 150 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 MAP1LC3B2A6NCE7 125 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 H7C1H1 209 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 M0QY20 66 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 GIPP09681 153 aaPredicted RBP2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 SMIM17P0DL12 118 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 AKR1C3P42330 323 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 SSTP61278 116 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 CST9LP1Q5W188 147 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 CLPSL2Q6UWE3 100 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 PP632Q6XCG6 107 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 BAGE2Q86Y30 109 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 C20orf203Q8NBC4 194 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 MAP1LC3BQ9GZQ8 125 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 MED28Q9H204 178 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 RNF213Q63HN8 5207 aa2.45□□□□□ -2.02
SNRNP40-205ENST00000486941 IGLV4-60A0A075B6I1 120 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 IGLV4-3A0A075B6K6 122 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 A0A0J9YXV3 536 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 NDUFS6O75380 124 aaKnown RBP2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 CHTF8P0CG12 524 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 RPS10P46783 165 aaKnown RBP2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 RAB5CP51148 216 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 NKX2-5P52952 324 aaPredicted RBP2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 COX6A2Q02221 97 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 SPINK6Q6UWN8 80 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 TMUB2Q71RG4 321 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 AKAP14Q86UN6 197 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 TCTE3Q8IZS6 198 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 GTSF1Q8WW33 167 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 MBD3L1Q8WWY6 194 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 PGLYRP4Q96LB8 373 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 AP1S3Q96PC3 154 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 TMEM243Q9BU79 118 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 CYTL1Q9NRR1 136 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 MED9Q9NWA0 146 aa2.44□□□□□ -2.02
SNRNP40-205ENST00000486941 FXYD6-FXYD2A0A087WZ82 144 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 UMAD1C9J7I0 102 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 F2Z2F3 143 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 UBE2L6O14933 153 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 GATCO43716 136 aaKnown RBP2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 MGPP08493 103 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 IGLC6P0CF74 106 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 SULT1A2P50226 295 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 RPS20P60866 119 aaKnown RBP2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 CACNG7P62955 275 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 PRR3P79522 188 aaKnown RBP2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 SRSF9Q13242 221 aaKnown RBP eCLIP2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 MAJINQ3KP22 176 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms