RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TOMM6Q96B49 74 aa8.64□□□□□ -1.03
HDAC6-229ENST00000486665 A0A1B0GUV1 79 aa8.63□□□□□ -1.03
HDAC6-229ENST00000486665 PKIAP61925 76 aa8.63□□□□□ -1.03
HDAC6-229ENST00000486665 COA6Q5JTJ3 125 aaKnown RBP8.63□□□□□ -1.03
HDAC6-229ENST00000486665 AMMECR1LQ6DCA0 310 aa8.63□□□□□ -1.03
HDAC6-229ENST00000486665 FAM19A2Q8N3H0 131 aa8.63□□□□□ -1.03
HDAC6-229ENST00000486665 TMEM18Q96B42 140 aa8.63□□□□□ -1.03
HDAC6-229ENST00000486665 OPRPNQ99935 248 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-229ENST00000486665 KRTAP1-5Q9BYS1 174 aa8.63□□□□□ -1.03
HDAC6-229ENST00000486665 CYSLTR1Q9Y271 337 aa8.63□□□□□ -1.03
HDAC6-229ENST00000486665 ABCA13Q86UQ4 5058 aa8.62□□□□□ -1.03
HDAC6-229ENST00000486665 IGIPA6NJ69 53 aa8.62□□□□□ -1.03
HDAC6-229ENST00000486665 HSBP1O75506 76 aa8.62□□□□□ -1.03
HDAC6-229ENST00000486665 TIMM21Q9BVV7 248 aa8.62□□□□□ -1.03
HDAC6-229ENST00000486665 KLK12Q9UKR0 248 aa8.62□□□□□ -1.03
HDAC6-229ENST00000486665 NBDYA0A0U1RRE5 68 aa8.61□□□□□ -1.03
HDAC6-229ENST00000486665 A0A1B0GVY2 172 aa8.61□□□□□ -1.03
HDAC6-229ENST00000486665 M0R2N4 97 aa8.61□□□□□ -1.03
HDAC6-229ENST00000486665 HBDP02042 147 aa8.61□□□□□ -1.03
HDAC6-229ENST00000486665 G0S2P27469 103 aa8.61□□□□□ -1.03
HDAC6-229ENST00000486665 PDZD11Q5EBL8 140 aa8.61□□□□□ -1.03
HDAC6-229ENST00000486665 OR5A1Q8NGJ0 315 aa8.61□□□□□ -1.03
HDAC6-229ENST00000486665 TMEM101Q96IK0 257 aa8.61□□□□□ -1.03
HDAC6-229ENST00000486665 CDC42SE2Q9NRR3 84 aa8.61□□□□□ -1.03
HDAC6-229ENST00000486665 SPANXA1Q9NS26 97 aa8.61□□□□□ -1.03
HDAC6-229ENST00000486665 PYGO1Q9Y3Y4 419 aa8.61□□□□□ -1.03
HDAC6-229ENST00000486665 CSDC2Q9Y534 153 aaKnown RBP8.61□□□□□ -1.03
HDAC6-229ENST00000486665 IGLV4-3A0A075B6K6 122 aa8.6□□□□□ -1.03
HDAC6-229ENST00000486665 ANGP03950 147 aaKnown RBP8.6□□□□□ -1.03
HDAC6-229ENST00000486665 ZNF25P17030 456 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-229ENST00000486665 RNASE13Q5GAN3 156 aaKnown RBP8.6□□□□□ -1.03
HDAC6-229ENST00000486665 ZC2HC1BQ5TFG8 222 aa8.6□□□□□ -1.03
HDAC6-229ENST00000486665 DGAT2L7PQ6IED9 249 aa8.6□□□□□ -1.03
HDAC6-229ENST00000486665 Q6ZUT4 128 aa8.6□□□□□ -1.03
HDAC6-229ENST00000486665 LINC00269Q8N2A0 174 aa8.6□□□□□ -1.03
HDAC6-229ENST00000486665 ZNF664Q8N3J9 261 aa8.6□□□□□ -1.03
HDAC6-229ENST00000486665 SCGB3A1Q96QR1 104 aa8.6□□□□□ -1.03
HDAC6-229ENST00000486665 TRAV9-2A0A087WT02 112 aa8.59□□□□□ -1.03
HDAC6-229ENST00000486665 IBA57-AS1B1ANH7 110 aa8.59□□□□□ -1.03
HDAC6-229ENST00000486665 SMAGPQ0VAQ4 97 aa8.59□□□□□ -1.03
HDAC6-229ENST00000486665 CLPSL2Q6UWE3 100 aa8.59□□□□□ -1.03
HDAC6-229ENST00000486665 ENHOQ6UWT2 76 aa8.59□□□□□ -1.03
HDAC6-229ENST00000486665 LINC00173Q6ZV60 143 aa8.59□□□□□ -1.03
HDAC6-229ENST00000486665 ERASQ7Z444 233 aa8.59□□□□□ -1.03
HDAC6-229ENST00000486665 MRPS36P82909 103 aaKnown RBP8.58□□□□□ -1.04
HDAC6-229ENST00000486665 Q6ZR54 194 aa8.58□□□□□ -1.04
HDAC6-229ENST00000486665 UBE2WQ96B02 151 aa8.58□□□□□ -1.04
HDAC6-229ENST00000486665 TMEM141Q96I45 108 aa8.58□□□□□ -1.04
HDAC6-229ENST00000486665 TIMM17AQ99595 171 aa8.58□□□□□ -1.04
HDAC6-229ENST00000486665 PRR34Q9NV39 138 aa8.58□□□□□ -1.04
HDAC6-229ENST00000486665 IGKV3OR2-268A0A0C4DH90 116 aa8.57□□□□□ -1.04
HDAC6-229ENST00000486665 C10orf126Q8N4M7 172 aa8.57□□□□□ -1.04
HDAC6-229ENST00000486665 LINC01549A6NIU2 74 aa8.56□□□□□ -1.04
HDAC6-229ENST00000486665 K7EP13 123 aa8.56□□□□□ -1.04
HDAC6-229ENST00000486665 RTL8CO15255 209 aa8.56□□□□□ -1.04
HDAC6-229ENST00000486665 S100A6P06703 90 aa8.56□□□□□ -1.04
HDAC6-229ENST00000486665 FABP4P15090 132 aa8.56□□□□□ -1.04
HDAC6-229ENST00000486665 SNRPEP62304 92 aaKnown RBP8.56□□□□□ -1.04
HDAC6-229ENST00000486665 REG3AQ06141 175 aa8.56□□□□□ -1.04
HDAC6-229ENST00000486665 TTC32Q5I0X7 151 aa8.56□□□□□ -1.04
HDAC6-229ENST00000486665 AMELXQ99217 191 aa8.56□□□□□ -1.04
HDAC6-229ENST00000486665 TMA7Q9Y2S6 64 aaKnown RBP8.56□□□□□ -1.04
HDAC6-229ENST00000486665 HSPG2P98160 4391 aa8.55□□□□□ -1.04
HDAC6-229ENST00000486665 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-229ENST00000486665 LEPROTL1O95214 131 aa8.55□□□□□ -1.04
HDAC6-229ENST00000486665 NPSP0C0P6 89 aa8.55□□□□□ -1.04
HDAC6-229ENST00000486665 HIST3H2BBQ8N257 126 aa8.55□□□□□ -1.04
HDAC6-229ENST00000486665 BAALCQ8WXS3 180 aa8.55□□□□□ -1.04
HDAC6-229ENST00000486665 KRTAP4-5Q9BYR2 181 aa8.55□□□□□ -1.04
HDAC6-229ENST00000486665 VCX2Q9H322 139 aa8.55□□□□□ -1.04
HDAC6-229ENST00000486665 Q9HAA7 133 aa8.55□□□□□ -1.04
HDAC6-229ENST00000486665 LINC00959A0A1B0GUT2 108 aa8.54□□□□□ -1.04
HDAC6-229ENST00000486665 C5orf52A6NGY3 159 aa8.54□□□□□ -1.04
HDAC6-229ENST00000486665 PRSS29PA6NIE9 313 aa8.54□□□□□ -1.04
HDAC6-229ENST00000486665 ATP5LO75964 103 aa8.54□□□□□ -1.04
HDAC6-229ENST00000486665 IFI27L1Q96BM0 104 aa8.54□□□□□ -1.04
HDAC6-229ENST00000486665 IGLV10-54A0A075B6I4 117 aa8.53□□□□□ -1.04
HDAC6-229ENST00000486665 TRAV8-3A0A0A6YYJ7 113 aa8.53□□□□□ -1.04
HDAC6-229ENST00000486665 TRAV13-1A0A0B4J241 112 aa8.53□□□□□ -1.04
HDAC6-229ENST00000486665 CRPP02741 224 aa8.53□□□□□ -1.04
HDAC6-229ENST00000486665 Q6ZN92 141 aa8.53□□□□□ -1.04
HDAC6-229ENST00000486665 TEX43Q6ZNM6 134 aa8.53□□□□□ -1.04
HDAC6-229ENST00000486665 CST9LQ9H4G1 147 aa8.53□□□□□ -1.04
HDAC6-229ENST00000486665 IFITM10A6NMD0 228 aa8.52□□□□□ -1.05
HDAC6-229ENST00000486665 PMVKQ15126 192 aa8.52□□□□□ -1.05
HDAC6-229ENST00000486665 MIAQ16674 131 aa8.52□□□□□ -1.05
HDAC6-229ENST00000486665 PAPPA-AS1Q5QFB9 102 aa8.52□□□□□ -1.05
HDAC6-229ENST00000486665 KRTAP26-1Q6PEX3 210 aa8.52□□□□□ -1.05
HDAC6-229ENST00000486665 LINC00336Q6ZUF6 198 aa8.52□□□□□ -1.05
HDAC6-229ENST00000486665 HSPB8Q9UJY1 196 aa8.52□□□□□ -1.05
HDAC6-229ENST00000486665 IGKV2D-24A0A075B6R9 120 aa8.51□□□□□ -1.05
HDAC6-229ENST00000486665 PRSS1P07477 247 aa8.51□□□□□ -1.05
HDAC6-229ENST00000486665 UBE2D1P51668 147 aa8.51□□□□□ -1.05
HDAC6-229ENST00000486665 C6orf223Q8N319 242 aa8.51□□□□□ -1.05
HDAC6-229ENST00000486665 CHCHD10Q8WYQ3 142 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-229ENST00000486665 TRAV8-4A0A0B4J246 113 aa8.5□□□□□ -1.05
HDAC6-229ENST00000486665 CCL25O15444 150 aa8.5□□□□□ -1.05
HDAC6-229ENST00000486665 SS18Q15532 418 aa8.5□□□□□ -1.05
HDAC6-229ENST00000486665 C1orf134Q5TEV5 83 aa8.5□□□□□ -1.05
HDAC6-229ENST00000486665 Q6ZRN7 208 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms