RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 ZNF25P17030 456 aaPredicted RBP8.58□□□□□ -1.04
U2AF1-211ENST00000486519 AKR1C3P42330 323 aa8.58□□□□□ -1.04
U2AF1-211ENST00000486519 PSMG3Q9BT73 122 aaPredicted RBP8.58□□□□□ -1.04
U2AF1-211ENST00000486519 CTDSP1Q9GZU7 261 aa8.58□□□□□ -1.04
U2AF1-211ENST00000486519 CDC42SE2Q9NRR3 84 aa8.58□□□□□ -1.04
U2AF1-211ENST00000486519 MRPL35Q9NZE8 188 aaKnown RBP8.58□□□□□ -1.04
U2AF1-211ENST00000486519 C6orf48Q9UBA6 75 aa8.58□□□□□ -1.04
U2AF1-211ENST00000486519 RNASE13Q5GAN3 156 aaKnown RBP8.57□□□□□ -1.04
U2AF1-211ENST00000486519 C9orf129Q5T035 196 aaKnown RBP8.57□□□□□ -1.04
U2AF1-211ENST00000486519 LINC00337Q8N6G1 96 aa8.57□□□□□ -1.04
U2AF1-211ENST00000486519 SMDT1Q9H4I9 107 aa8.57□□□□□ -1.04
U2AF1-211ENST00000486519 G3V3Q6 166 aa8.56□□□□□ -1.04
U2AF1-211ENST00000486519 NCR2O95944 276 aa8.56□□□□□ -1.04
U2AF1-211ENST00000486519 TLX1NBP0CAT3 122 aa8.56□□□□□ -1.04
U2AF1-211ENST00000486519 SEC61BP60468 96 aaKnown RBP8.56□□□□□ -1.04
U2AF1-211ENST00000486519 LINC00242Q5T6M2 205 aa8.56□□□□□ -1.04
U2AF1-211ENST00000486519 UNQ6190/PRO20217Q6UXQ8 127 aa8.56□□□□□ -1.04
U2AF1-211ENST00000486519 TMEM101Q96IK0 257 aa8.56□□□□□ -1.04
U2AF1-211ENST00000486519 OR2D3Q8NGH3 330 aa8.55□□□□□ -1.04
U2AF1-211ENST00000486519 BTF3L4Q96K17 158 aa8.55□□□□□ -1.04
U2AF1-211ENST00000486519 FLGP20930 4061 aaPredicted RBP8.54□□□□□ -1.04
U2AF1-211ENST00000486519 TNFSF18Q9UNG2 199 aa8.54□□□□□ -1.04
U2AF1-211ENST00000486519 SYNE2Q8WXH0 6885 aaKnown RBP8.54□□□□□ -1.04
U2AF1-211ENST00000486519 CTXND1A0A1B0GTU2 59 aa8.53□□□□□ -1.04
U2AF1-211ENST00000486519 MBP02144 154 aa8.53□□□□□ -1.04
U2AF1-211ENST00000486519 MZT2BQ6NZ67 158 aa8.53□□□□□ -1.04
U2AF1-211ENST00000486519 IMMP2LQ96T52 175 aa8.53□□□□□ -1.04
U2AF1-211ENST00000486519 NKX6-2Q9C056 277 aaPredicted RBP8.53□□□□□ -1.04
U2AF1-211ENST00000486519 SCO2A0A1W2PP80 73 aa8.52□□□□□ -1.05
U2AF1-211ENST00000486519 SERF2P84101 59 aa8.52□□□□□ -1.05
U2AF1-211ENST00000486519 CST9LP1Q5W188 147 aa8.52□□□□□ -1.05
U2AF1-211ENST00000486519 BAGE2Q86Y30 109 aa8.52□□□□□ -1.05
U2AF1-211ENST00000486519 SDHAF1A6NFY7 115 aa8.51□□□□□ -1.05
U2AF1-211ENST00000486519 STOML3Q8TAV4 291 aa8.51□□□□□ -1.05
U2AF1-211ENST00000486519 ORAOV1Q8WV07 137 aa8.51□□□□□ -1.05
U2AF1-211ENST00000486519 TRAV13-1A0A0B4J241 112 aa8.5□□□□□ -1.05
U2AF1-211ENST00000486519 FAM240BA0A1B0GVZ2 78 aa8.5□□□□□ -1.05
U2AF1-211ENST00000486519 NUPR1O60356 82 aa8.5□□□□□ -1.05
U2AF1-211ENST00000486519 FOXA3P55318 350 aaPredicted RBP8.5□□□□□ -1.05
U2AF1-211ENST00000486519 LYZL1Q6UWQ5 148 aa8.5□□□□□ -1.05
U2AF1-211ENST00000486519 MRPL52Q86TS9 123 aaKnown RBP8.5□□□□□ -1.05
U2AF1-211ENST00000486519 RNASE7Q9H1E1 156 aaKnown RBP8.5□□□□□ -1.05
U2AF1-211ENST00000486519 TMEM242Q9NWH2 141 aa8.5□□□□□ -1.05
U2AF1-211ENST00000486519 C1orf196B1AJZ1 125 aa8.49□□□□□ -1.05
U2AF1-211ENST00000486519 NDUFA1O15239 70 aa8.49□□□□□ -1.05
U2AF1-211ENST00000486519 TRGC1P0CF51 173 aa8.49□□□□□ -1.05
U2AF1-211ENST00000486519 CTRLP40313 264 aa8.49□□□□□ -1.05
U2AF1-211ENST00000486519 ALG5Q9Y673 324 aa8.49□□□□□ -1.05
U2AF1-211ENST00000486519 PET100P0DJ07 73 aa8.48□□□□□ -1.05
U2AF1-211ENST00000486519 RPL28P46779 137 aaKnown RBP8.48□□□□□ -1.05
U2AF1-211ENST00000486519 OR10D4PQ8NGN7 298 aa8.48□□□□□ -1.05
U2AF1-211ENST00000486519 C22orf24Q9Y442 160 aa8.48□□□□□ -1.05
U2AF1-211ENST00000486519 BCE1O60756 84 aa8.47□□□□□ -1.05
U2AF1-211ENST00000486519 PAGE4O60829 102 aa8.47□□□□□ -1.05
U2AF1-211ENST00000486519 PMCHP20382 165 aa8.47□□□□□ -1.05
U2AF1-211ENST00000486519 FHITP49789 147 aa8.47□□□□□ -1.05
U2AF1-211ENST00000486519 FP248Q71RG6 208 aaPredicted RBP8.47□□□□□ -1.05
U2AF1-211ENST00000486519 C3orf22Q8N5N4 141 aa8.47□□□□□ -1.05
U2AF1-211ENST00000486519 MACF1Q9UPN3 7388 aaKnown RBP8.47□□□□□ -1.05
U2AF1-211ENST00000486519 MAP1LC3B2A6NCE7 125 aa8.46□□□□□ -1.06
U2AF1-211ENST00000486519 I3L3M4 83 aa8.46□□□□□ -1.06
U2AF1-211ENST00000486519 MRAP2Q96G30 205 aa8.46□□□□□ -1.06
U2AF1-211ENST00000486519 MAP1LC3BQ9GZQ8 125 aa8.46□□□□□ -1.06
U2AF1-211ENST00000486519 FAM229BQ4G0N7 80 aa8.45□□□□□ -1.06
U2AF1-211ENST00000486519 LINC00299Q6ZSB3 139 aa8.45□□□□□ -1.06
U2AF1-211ENST00000486519 Q6ZUT4 128 aa8.45□□□□□ -1.06
U2AF1-211ENST00000486519 S100ZQ8WXG8 99 aa8.45□□□□□ -1.06
U2AF1-211ENST00000486519 TCEAL7Q9BRU2 100 aa8.45□□□□□ -1.06
U2AF1-211ENST00000486519 RPL7L1Q6DKI1 246 aaKnown RBP8.44□□□□□ -1.06
U2AF1-211ENST00000486519 KRTAP13-1Q8IUC0 172 aa8.44□□□□□ -1.06
U2AF1-211ENST00000486519 IGKV2D-26A0A0A0MRZ7 120 aa8.43□□□□□ -1.06
U2AF1-211ENST00000486519 M0R2T5 61 aa8.43□□□□□ -1.06
U2AF1-211ENST00000486519 KIAA0087Q14695 138 aa8.43□□□□□ -1.06
U2AF1-211ENST00000486519 TMEM241Q24JQ0 296 aa8.43□□□□□ -1.06
U2AF1-211ENST00000486519 C2orf82Q6UX34 121 aa8.43□□□□□ -1.06
U2AF1-211ENST00000486519 LINC00469Q8N7U9 141 aa8.43□□□□□ -1.06
U2AF1-211ENST00000486519 F2Z2F3 143 aa8.42□□□□□ -1.06
U2AF1-211ENST00000486519 KRTAP4-16G5E9R7 235 aaPredicted RBP8.42□□□□□ -1.06
U2AF1-211ENST00000486519 S100A9P06702 114 aaKnown RBP8.42□□□□□ -1.06
U2AF1-211ENST00000486519 TWIST1Q15672 202 aa8.42□□□□□ -1.06
U2AF1-211ENST00000486519 UBE2D4Q9Y2X8 147 aa8.42□□□□□ -1.06
U2AF1-211ENST00000486519 NDUFC2-KCTD14E9PQ53 114 aa8.41□□□□□ -1.06
U2AF1-211ENST00000486519 XP32Q5T750 250 aa8.41□□□□□ -1.06
U2AF1-211ENST00000486519 CCDC32Q9BV29 185 aa8.41□□□□□ -1.06
U2AF1-211ENST00000486519 IGHV3OR16-9A0A0B4J2B5 98 aa8.4□□□□□ -1.06
U2AF1-211ENST00000486519 C7orf77A4D0Y5 90 aa8.4□□□□□ -1.06
U2AF1-211ENST00000486519 F8WDY8 70 aa8.4□□□□□ -1.06
U2AF1-211ENST00000486519 RPS20P60866 119 aaKnown RBP8.4□□□□□ -1.06
U2AF1-211ENST00000486519 CTAG1AP78358 180 aa8.4□□□□□ -1.06
U2AF1-211ENST00000486519 TMUB2Q71RG4 321 aa8.4□□□□□ -1.06
U2AF1-211ENST00000486519 A0A1B0GV50 99 aa8.39□□□□□ -1.07
U2AF1-211ENST00000486519 RPL37AP8A6NKH3 93 aa8.39□□□□□ -1.07
U2AF1-211ENST00000486519 RPL35P42766 123 aaKnown RBP8.39□□□□□ -1.07
U2AF1-211ENST00000486519 FAM104AQ969W3 186 aa8.39□□□□□ -1.07
U2AF1-211ENST00000486519 TRBV6-5A0A0K0K1A5 114 aa8.38□□□□□ -1.07
U2AF1-211ENST00000486519 IFNA1P01562 189 aa8.38□□□□□ -1.07
U2AF1-211ENST00000486519 C9orf62Q8N4C0 152 aa8.38□□□□□ -1.07
U2AF1-211ENST00000486519 XAGE1AQ9HD64 81 aa8.38□□□□□ -1.07
U2AF1-211ENST00000486519 SSNA1O43805 119 aa8.37□□□□□ -1.07
U2AF1-211ENST00000486519 Q5BKY6 102 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms