RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 LYPD5Q6UWN5 251 aa9.94□□□□□ -0.82
COL9A1-207ENST00000486080 VCX2Q9H322 139 aa9.94□□□□□ -0.82
COL9A1-207ENST00000486080 H7C423 109 aa9.93□□□□□ -0.82
COL9A1-207ENST00000486080 AMELXQ99217 191 aa9.93□□□□□ -0.82
COL9A1-207ENST00000486080 CHTOPQ9Y3Y2 248 aaKnown RBP9.93□□□□□ -0.82
COL9A1-207ENST00000486080 MRPS36P82909 103 aaKnown RBP9.92□□□□□ -0.82
COL9A1-207ENST00000486080 OR5A1Q8NGJ0 315 aa9.92□□□□□ -0.82
COL9A1-207ENST00000486080 CSDC2Q9Y534 153 aaKnown RBP9.92□□□□□ -0.82
COL9A1-207ENST00000486080 IGLV4-60A0A075B6I1 120 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 hDV102S1A0JD36 115 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 IGLL5B9A064 214 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 TMEM262E9PQX1 116 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 F8VRH5 84 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 NPSP0C0P6 89 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 PAPPA-AS1Q5QFB9 102 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 LELP1Q5T871 98 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 CDC42SE2Q9NRR3 84 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 IGLV4-69A0A075B6H9 119 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 DPM2O94777 84 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 S100A12P80511 92 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 ESRGQ1W209 222 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 MPV17L2Q567V2 206 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 ZNF664Q8N3J9 261 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 Q8N3U1 123 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 TMEM101Q96IK0 257 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 VAMP8Q9BV40 100 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 PAM16Q9Y3D7 125 aa9.91□□□□□ -0.82
COL9A1-207ENST00000486080 TRAV9-2A0A087WT02 112 aa9.9□□□□□ -0.82
COL9A1-207ENST00000486080 IGKCP01834 107 aa9.9□□□□□ -0.82
COL9A1-207ENST00000486080 ZNF25P17030 456 aaPredicted RBP9.89□□□□□ -0.83
COL9A1-207ENST00000486080 TIRAPP58753 221 aa9.89□□□□□ -0.83
COL9A1-207ENST00000486080 RBX1P62877 108 aa9.89□□□□□ -0.83
COL9A1-207ENST00000486080 SMAGPQ0VAQ4 97 aa9.89□□□□□ -0.83
COL9A1-207ENST00000486080 STPG4Q8N801 248 aa9.89□□□□□ -0.83
COL9A1-207ENST00000486080 A0A0J9YXV3 536 aa9.89□□□□□ -0.83
COL9A1-207ENST00000486080 C15orf53Q8NAA6 179 aa9.89□□□□□ -0.83
COL9A1-207ENST00000486080 CSMD3Q7Z407 3707 aa9.88□□□□□ -0.83
COL9A1-207ENST00000486080 C11orf86A6NJI1 115 aa9.88□□□□□ -0.83
COL9A1-207ENST00000486080 PLNP26678 52 aa9.88□□□□□ -0.83
COL9A1-207ENST00000486080 TCTAP57738 103 aa9.88□□□□□ -0.83
COL9A1-207ENST00000486080 SPATA45Q537H7 98 aa9.87□□□□□ -0.83
COL9A1-207ENST00000486080 PRO1933Q9H354 126 aa9.87□□□□□ -0.83
COL9A1-207ENST00000486080 A0A1B0GUV1 79 aa9.86□□□□□ -0.83
COL9A1-207ENST00000486080 UBE2D1P51668 147 aa9.86□□□□□ -0.83
COL9A1-207ENST00000486080 C2orf88Q9BSF0 95 aa9.86□□□□□ -0.83
COL9A1-207ENST00000486080 TRAV13-1A0A0B4J241 112 aa9.86□□□□□ -0.83
COL9A1-207ENST00000486080 TRAV8-6A0A0B4J262 113 aa9.86□□□□□ -0.83
COL9A1-207ENST00000486080 IGKV3OR2-268A0A0C4DH90 116 aa9.86□□□□□ -0.83
COL9A1-207ENST00000486080 IGLC3P0DOY3 106 aa9.86□□□□□ -0.83
COL9A1-207ENST00000486080 WFDC10BQ8IUB3 73 aa9.86□□□□□ -0.83
COL9A1-207ENST00000486080 DNAH7Q8WXX0 4024 aa9.85□□□□□ -0.83
COL9A1-207ENST00000486080 ANKRD39Q53RE8 183 aa9.85□□□□□ -0.83
COL9A1-207ENST00000486080 CHAC1Q9BUX1 264 aa9.85□□□□□ -0.83
COL9A1-207ENST00000486080 DYNC2H1Q8NCM8 4307 aaKnown RBP9.85□□□□□ -0.83
COL9A1-207ENST00000486080 HSBP1L1C9JCN9 74 aa9.84□□□□□ -0.83
COL9A1-207ENST00000486080 NFE4Q86UQ8 179 aa9.84□□□□□ -0.83
COL9A1-207ENST00000486080 CLPSL2Q6UWE3 100 aa9.84□□□□□ -0.83
COL9A1-207ENST00000486080 IGHV3-30P01768 117 aa9.83□□□□□ -0.84
COL9A1-207ENST00000486080 IGHV3-33P01772 117 aa9.83□□□□□ -0.84
COL9A1-207ENST00000486080 IGHV3-30-3P0DP02 117 aa9.83□□□□□ -0.84
COL9A1-207ENST00000486080 IGHV3-30-5P0DP03 117 aa9.83□□□□□ -0.84
COL9A1-207ENST00000486080 COX6A2Q02221 97 aa9.83□□□□□ -0.84
COL9A1-207ENST00000486080 LINC00242Q5T6M2 205 aa9.83□□□□□ -0.84
COL9A1-207ENST00000486080 LINC00588Q9Y4M8 146 aa9.83□□□□□ -0.84
COL9A1-207ENST00000486080 TINCRA0A1B0GVN0 87 aa9.82□□□□□ -0.84
COL9A1-207ENST00000486080 ANGP03950 147 aaKnown RBP9.82□□□□□ -0.84
COL9A1-207ENST00000486080 ZNF22P17026 224 aaPredicted RBP9.82□□□□□ -0.84
COL9A1-207ENST00000486080 TMEM170BQ5T4T1 132 aa9.82□□□□□ -0.84
COL9A1-207ENST00000486080 LINC00269Q8N2A0 174 aa9.82□□□□□ -0.84
COL9A1-207ENST00000486080 IGKV2D-26A0A0A0MRZ7 120 aa9.82□□□□□ -0.84
COL9A1-207ENST00000486080 C14orf144Q96I85 54 aa9.82□□□□□ -0.84
COL9A1-207ENST00000486080 APLNQ9ULZ1 77 aa9.82□□□□□ -0.84
COL9A1-207ENST00000486080 TENM2Q9NT68 2774 aa9.81□□□□□ -0.84
COL9A1-207ENST00000486080 PKIAP61925 76 aa9.81□□□□□ -0.84
COL9A1-207ENST00000486080 LINC00959A0A1B0GUT2 108 aa9.8□□□□□ -0.84
COL9A1-207ENST00000486080 PCP4L1A6NKN8 68 aa9.8□□□□□ -0.84
COL9A1-207ENST00000486080 FAM19A3Q7Z5A8 133 aa9.8□□□□□ -0.84
COL9A1-207ENST00000486080 GEMIN7Q9H840 131 aaKnown RBP9.8□□□□□ -0.84
COL9A1-207ENST00000486080 TP73-AS1Q9UF72 201 aa9.8□□□□□ -0.84
COL9A1-207ENST00000486080 KLK12Q9UKR0 248 aa9.8□□□□□ -0.84
COL9A1-207ENST00000486080 NUPR2A6NF83 97 aa9.79□□□□□ -0.84
COL9A1-207ENST00000486080 CCL18P55774 89 aa9.79□□□□□ -0.84
COL9A1-207ENST00000486080 LINC00469Q8N7U9 141 aa9.79□□□□□ -0.84
COL9A1-207ENST00000486080 CDKN2A-AS1Q9UH64 79 aa9.79□□□□□ -0.84
COL9A1-207ENST00000486080 MRPS16Q9Y3D3 137 aaKnown RBP9.79□□□□□ -0.84
COL9A1-207ENST00000486080 NMUP48645 174 aa9.79□□□□□ -0.84
COL9A1-207ENST00000486080 REG3AQ06141 175 aa9.79□□□□□ -0.84
COL9A1-207ENST00000486080 TMEM223A0PJW6 202 aa9.78□□□□□ -0.84
COL9A1-207ENST00000486080 TSTD3H0UI37 97 aa9.78□□□□□ -0.84
COL9A1-207ENST00000486080 HERVK_113P63121 156 aa9.78□□□□□ -0.84
COL9A1-207ENST00000486080 ZFAND6Q6FIF0 208 aa9.78□□□□□ -0.84
COL9A1-207ENST00000486080 TTTY13Q9BZ97 58 aa9.78□□□□□ -0.84
COL9A1-207ENST00000486080 PLECQ15149 4684 aaKnown RBP9.77□□□□□ -0.84
COL9A1-207ENST00000486080 IGHV3-64A0A075B6Q5 118 aa9.77□□□□□ -0.84
COL9A1-207ENST00000486080 IGLV5-45A0A087WSX0 123 aa9.77□□□□□ -0.84
COL9A1-207ENST00000486080 PCP2Q8IVA1 136 aa9.77□□□□□ -0.84
COL9A1-207ENST00000486080 LYSTQ99698 3801 aa9.77□□□□□ -0.84
COL9A1-207ENST00000486080 KLK5Q9Y337 293 aaPredicted RBP9.77□□□□□ -0.84
COL9A1-207ENST00000486080 STARD9Q9P2P6 4700 aa9.77□□□□□ -0.85
COL9A1-207ENST00000486080 SPINK8P0C7L1 97 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms