RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 IGHV3-64DA0A0J9YX35 117 aa2.95□□□□□ -1.94
RTN4-213ENST00000485749 C2orf70A6NJV1 201 aa2.95□□□□□ -1.94
RTN4-213ENST00000485749 H3BQ85 93 aa2.95□□□□□ -1.94
RTN4-213ENST00000485749 IGHV3-53P01767 116 aa2.95□□□□□ -1.94
RTN4-213ENST00000485749 IGLV7-43P04211 117 aa2.95□□□□□ -1.94
RTN4-213ENST00000485749 IAPPP10997 89 aa2.95□□□□□ -1.94
RTN4-213ENST00000485749 IMMP1LQ96LU5 166 aa2.95□□□□□ -1.94
RTN4-213ENST00000485749 BPESC1Q9GZL8 116 aa2.95□□□□□ -1.94
RTN4-213ENST00000485749 NINQ8N4C6 2090 aa2.95□□□□□ -1.94
RTN4-213ENST00000485749 LTBP2Q14767 1821 aa2.95□□□□□ -1.94
RTN4-213ENST00000485749 A0A087WSZ3 146 aa2.94□□□□□ -1.94
RTN4-213ENST00000485749 TRAV12-3A0A0B4J271 114 aa2.94□□□□□ -1.94
RTN4-213ENST00000485749 TEX49A0A1B0GTD5 131 aa2.94□□□□□ -1.94
RTN4-213ENST00000485749 FAM223BA6NKX1 122 aa2.94□□□□□ -1.94
RTN4-213ENST00000485749 A8MUU9 505 aa2.94□□□□□ -1.94
RTN4-213ENST00000485749 C10orf142B7Z368 130 aa2.94□□□□□ -1.94
RTN4-213ENST00000485749 LEPROTL1O95214 131 aa2.94□□□□□ -1.94
RTN4-213ENST00000485749 LHBP01229 141 aa2.94□□□□□ -1.94
RTN4-213ENST00000485749 MIR22HGQ0VDD5 57 aa2.94□□□□□ -1.94
RTN4-213ENST00000485749 NDUFA11Q86Y39 141 aa2.94□□□□□ -1.94
RTN4-213ENST00000485749 TFF1P04155 84 aa2.93□□□□□ -1.94
RTN4-213ENST00000485749 KRTAP10-5P60370 271 aa2.93□□□□□ -1.94
RTN4-213ENST00000485749 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
RTN4-213ENST00000485749 TMEM167BQ9NRX6 74 aa2.93□□□□□ -1.94
RTN4-213ENST00000485749 C22orf24Q9Y442 160 aa2.93□□□□□ -1.94
RTN4-213ENST00000485749 SRCAPQ6ZRS2 3230 aa2.93□□□□□ -1.94
RTN4-213ENST00000485749 IGHV3-64A0A075B6Q5 118 aa2.92□□□□□ -1.94
RTN4-213ENST00000485749 ARL14EPLP0DKL9 152 aa2.92□□□□□ -1.94
RTN4-213ENST00000485749 MOBPQ13875 183 aa2.92□□□□□ -1.94
RTN4-213ENST00000485749 Q5VV11 94 aa2.92□□□□□ -1.94
RTN4-213ENST00000485749 TMEM105Q8N8V8 129 aa2.92□□□□□ -1.94
RTN4-213ENST00000485749 CYYR1Q96J86 154 aa2.92□□□□□ -1.94
RTN4-213ENST00000485749 TMEM14BQ9NUH8 114 aa2.92□□□□□ -1.94
RTN4-213ENST00000485749 HEATR5BQ9P2D3 2071 aa2.92□□□□□ -1.94
RTN4-213ENST00000485749 DSCAMO60469 2012 aa2.92□□□□□ -1.94
RTN4-213ENST00000485749 CPAMD8Q8IZJ3 1885 aa2.91□□□□□ -1.94
RTN4-213ENST00000485749 D6R8Y8 96 aa2.91□□□□□ -1.94
RTN4-213ENST00000485749 GIG44P09565 113 aaPredicted RBP2.91□□□□□ -1.94
RTN4-213ENST00000485749 SAA2P0DJI9 122 aaPredicted RBP2.91□□□□□ -1.94
RTN4-213ENST00000485749 TFF3Q07654 80 aa2.91□□□□□ -1.94
RTN4-213ENST00000485749 DEFB133Q30KQ1 61 aa2.91□□□□□ -1.94
RTN4-213ENST00000485749 MUSTN1Q8IVN3 82 aa2.91□□□□□ -1.94
RTN4-213ENST00000485749 C20orf166-AS1Q96NR2 134 aa2.91□□□□□ -1.94
RTN4-213ENST00000485749 S4R3C0 116 aa2.91□□□□□ -1.94
RTN4-213ENST00000485749 V9GYV3 84 aa2.91□□□□□ -1.94
RTN4-213ENST00000485749 HEATR5AQ86XA9 2040 aa2.91□□□□□ -1.94
RTN4-213ENST00000485749 PTPRBP23467 1997 aa2.91□□□□□ -1.94
RTN4-213ENST00000485749 TRPM6Q9BX84 2022 aa2.9□□□□□ -1.94
RTN4-213ENST00000485749 NOTCH3Q9UM47 2321 aa2.9□□□□□ -1.95
RTN4-213ENST00000485749 IGKV3D-15A0A087WSY6 115 aa2.9□□□□□ -1.95
RTN4-213ENST00000485749 TRBV10-1A0A0K0K1A3 114 aa2.9□□□□□ -1.95
RTN4-213ENST00000485749 SMIM27A0A1W2PRY6 76 aa2.9□□□□□ -1.95
RTN4-213ENST00000485749 MRPL33O75394 65 aaKnown RBP2.9□□□□□ -1.95
RTN4-213ENST00000485749 ELOF1P60002 83 aaKnown RBP2.9□□□□□ -1.95
RTN4-213ENST00000485749 SPANXA2-OT1Q8N9U9 137 aa2.9□□□□□ -1.95
RTN4-213ENST00000485749 UBE2D4Q9Y2X8 147 aa2.9□□□□□ -1.95
RTN4-213ENST00000485749 MINOS1-NBL1R4GNA1 71 aa2.9□□□□□ -1.95
RTN4-213ENST00000485749 THADAQ6YHU6 1953 aa2.9□□□□□ -1.95
RTN4-213ENST00000485749 SCN3AQ9NY46 2000 aa2.9□□□□□ -1.95
RTN4-213ENST00000485749 COL5A1P20908 1838 aaPredicted RBP2.89□□□□□ -1.95
RTN4-213ENST00000485749 TET1Q8NFU7 2136 aa2.89□□□□□ -1.95
RTN4-213ENST00000485749 ARID1AO14497 2285 aa2.89□□□□□ -1.95
RTN4-213ENST00000485749 TRBV6-8A0A0A6YYG3 113 aa2.89□□□□□ -1.95
RTN4-213ENST00000485749 FAM168BA1KXE4 195 aa2.89□□□□□ -1.95
RTN4-213ENST00000485749 HIGD1CA8MV81 97 aa2.89□□□□□ -1.95
RTN4-213ENST00000485749 ERHP84090 104 aaKnown RBP2.89□□□□□ -1.95
RTN4-213ENST00000485749 Q6ZR03 302 aa2.89□□□□□ -1.95
RTN4-213ENST00000485749 RNF5Q99942 180 aa2.89□□□□□ -1.95
RTN4-213ENST00000485749 CDC42SE2Q9NRR3 84 aa2.89□□□□□ -1.95
RTN4-213ENST00000485749 MYOFQ9NZM1 2061 aa2.89□□□□□ -1.95
RTN4-213ENST00000485749 PCNX3Q9H6A9 2034 aa2.88□□□□□ -1.95
RTN4-213ENST00000485749 LINC01549A6NIU2 74 aa2.88□□□□□ -1.95
RTN4-213ENST00000485749 ARMS2P0C7Q2 107 aa2.88□□□□□ -1.95
RTN4-213ENST00000485749 UBE2D1P51668 147 aa2.88□□□□□ -1.95
RTN4-213ENST00000485749 EIF4EBP1Q13541 118 aaPredicted RBP2.88□□□□□ -1.95
RTN4-213ENST00000485749 KIF26BQ2KJY2 2108 aa2.88□□□□□ -1.95
RTN4-213ENST00000485749 DEFB116Q30KQ4 102 aa2.88□□□□□ -1.95
RTN4-213ENST00000485749 DEFB113Q30KQ7 82 aa2.88□□□□□ -1.95
RTN4-213ENST00000485749 C9orf129Q5T035 196 aaKnown RBP2.88□□□□□ -1.95
RTN4-213ENST00000485749 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.88□□□□□ -1.95
RTN4-213ENST00000485749 KRTAP7-1Q8IUC3 87 aa2.88□□□□□ -1.95
RTN4-213ENST00000485749 MAPK1IP1LQ8NDC0 245 aa2.88□□□□□ -1.95
RTN4-213ENST00000485749 TYMSOSQ8TAI1 123 aa2.88□□□□□ -1.95
RTN4-213ENST00000485749 Q8TAT8 98 aa2.88□□□□□ -1.95
RTN4-213ENST00000485749 KLF14Q8TD94 323 aaPredicted RBP2.88□□□□□ -1.95
RTN4-213ENST00000485749 NUMA1Q14980 2115 aa2.87□□□□□ -1.95
RTN4-213ENST00000485749 PANO1I0J062 215 aa2.87□□□□□ -1.95
RTN4-213ENST00000485749 IGHV3-33P01772 117 aa2.87□□□□□ -1.95
RTN4-213ENST00000485749 C14orf177Q52M58 125 aa2.87□□□□□ -1.95
RTN4-213ENST00000485749 GFRA4Q9GZZ7 299 aa2.87□□□□□ -1.95
RTN4-213ENST00000485749 PROK2Q9HC23 129 aa2.87□□□□□ -1.95
RTN4-213ENST00000485749 NDUFA4L2Q9NRX3 87 aa2.87□□□□□ -1.95
RTN4-213ENST00000485749 ORMDL1Q9P0S3 153 aa2.87□□□□□ -1.95
RTN4-213ENST00000485749 LENEPQ9Y5L5 61 aa2.87□□□□□ -1.95
RTN4-213ENST00000485749 TANC2Q9HCD6 1990 aa2.87□□□□□ -1.95
RTN4-213ENST00000485749 LRP4O75096 1905 aa2.86□□□□□ -1.95
RTN4-213ENST00000485749 TRAV12-1A0A0B4J245 112 aa2.86□□□□□ -1.95
RTN4-213ENST00000485749 LOC101927531A0A1B0GV80 90 aa2.86□□□□□ -1.95
RTN4-213ENST00000485749 ODF3BA8MYP8 253 aa2.86□□□□□ -1.95
RTN4-213ENST00000485749 PSCAO43653 123 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms