RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 PKIAP61925 76 aa7.88□□□□□ -1.15
APTX-227ENST00000485479 OR5A1Q8NGJ0 315 aa7.88□□□□□ -1.15
APTX-227ENST00000485479 DNAH5Q8TE73 4624 aa7.87□□□□□ -1.15
APTX-227ENST00000485479 A0A087WTM6 91 aa7.87□□□□□ -1.15
APTX-227ENST00000485479 LRCOL1A6NCL2 159 aa7.87□□□□□ -1.15
APTX-227ENST00000485479 PRSS47A8MTI9 375 aa7.87□□□□□ -1.15
APTX-227ENST00000485479 BTF3P20290 206 aaKnown RBP7.87□□□□□ -1.15
APTX-227ENST00000485479 COX19Q49B96 90 aa7.87□□□□□ -1.15
APTX-227ENST00000485479 DGAT2L7PQ6IED9 249 aa7.87□□□□□ -1.15
APTX-227ENST00000485479 SPATA12Q7Z6I5 190 aa7.87□□□□□ -1.15
APTX-227ENST00000485479 PRSS3P2Q8NHM4 247 aa7.87□□□□□ -1.15
APTX-227ENST00000485479 FAM104AQ969W3 186 aa7.87□□□□□ -1.15
APTX-227ENST00000485479 TMEM101Q96IK0 257 aa7.87□□□□□ -1.15
APTX-227ENST00000485479 TRGC2P03986 189 aa7.86□□□□□ -1.15
APTX-227ENST00000485479 Q0VG73 95 aa7.86□□□□□ -1.15
APTX-227ENST00000485479 ZC2HC1BQ5TFG8 222 aa7.86□□□□□ -1.15
APTX-227ENST00000485479 CDC42SE2Q9NRR3 84 aa7.86□□□□□ -1.15
APTX-227ENST00000485479 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.86□□□□□ -1.15
APTX-227ENST00000485479 COLCA2A8K830 154 aa7.86□□□□□ -1.15
APTX-227ENST00000485479 H7C423 109 aa7.86□□□□□ -1.15
APTX-227ENST00000485479 PMCHL1Q16048 86 aa7.86□□□□□ -1.15
APTX-227ENST00000485479 MIAQ16674 131 aa7.86□□□□□ -1.15
APTX-227ENST00000485479 MRPL52Q86TS9 123 aaKnown RBP7.86□□□□□ -1.15
APTX-227ENST00000485479 C18orf32Q8TCD1 76 aa7.86□□□□□ -1.15
APTX-227ENST00000485479 BIRC6Q9NR09 4857 aa7.85□□□□□ -1.15
APTX-227ENST00000485479 ZNF25P17030 456 aaPredicted RBP7.85□□□□□ -1.15
APTX-227ENST00000485479 KRTAP26-1Q6PEX3 210 aa7.85□□□□□ -1.15
APTX-227ENST00000485479 C2orf66Q6UXQ4 117 aa7.85□□□□□ -1.15
APTX-227ENST00000485479 ZNF664Q8N3J9 261 aa7.85□□□□□ -1.15
APTX-227ENST00000485479 URB1-AS1Q96HZ7 61 aa7.85□□□□□ -1.15
APTX-227ENST00000485479 NXT2Q9NPJ8 142 aaKnown RBP7.85□□□□□ -1.15
APTX-227ENST00000485479 TRAV13-1A0A0B4J241 112 aa7.84□□□□□ -1.15
APTX-227ENST00000485479 XCL1P47992 114 aa7.84□□□□□ -1.15
APTX-227ENST00000485479 TM2D2Q9BX73 214 aa7.84□□□□□ -1.15
APTX-227ENST00000485479 RMI2Q96E14 147 aa7.84□□□□□ -1.15
APTX-227ENST00000485479 LINC00959A0A1B0GUT2 108 aa7.83□□□□□ -1.16
APTX-227ENST00000485479 GAGE12HA6NDE8 117 aa7.83□□□□□ -1.16
APTX-227ENST00000485479 FA2HQ7L5A8 372 aa7.83□□□□□ -1.16
APTX-227ENST00000485479 CHCHD10Q8WYQ3 142 aaPredicted RBP7.83□□□□□ -1.16
APTX-227ENST00000485479 TMEM18Q96B42 140 aa7.83□□□□□ -1.16
APTX-227ENST00000485479 DYNC1H1Q14204 4646 aaKnown RBP7.83□□□□□ -1.16
APTX-227ENST00000485479 CCL25O15444 150 aa7.82□□□□□ -1.16
APTX-227ENST00000485479 LINC01620Q4KN68 170 aa7.82□□□□□ -1.16
APTX-227ENST00000485479 ORMDL2Q53FV1 153 aa7.82□□□□□ -1.16
APTX-227ENST00000485479 Q8N814 137 aa7.82□□□□□ -1.16
APTX-227ENST00000485479 CYSLTR1Q9Y271 337 aa7.82□□□□□ -1.16
APTX-227ENST00000485479 LRP1BQ9NZR2 4599 aa7.81□□□□□ -1.16
APTX-227ENST00000485479 IGLV4-3A0A075B6K6 122 aa7.81□□□□□ -1.16
APTX-227ENST00000485479 USP17L23D6RBM5 183 aa7.81□□□□□ -1.16
APTX-227ENST00000485479 SPANXA1Q9NS26 97 aa7.81□□□□□ -1.16
APTX-227ENST00000485479 C16orf90A8MZG2 172 aa7.8□□□□□ -1.16
APTX-227ENST00000485479 CSDC2Q9Y534 153 aaKnown RBP7.8□□□□□ -1.16
APTX-227ENST00000485479 COX11Q9Y6N1 276 aa7.8□□□□□ -1.16
APTX-227ENST00000485479 KIAA1109Q2LD37 5005 aa7.8□□□□□ -1.16
APTX-227ENST00000485479 A0A096LNJ9 63 aa7.8□□□□□ -1.16
APTX-227ENST00000485479 TRAV8-4A0A0B4J246 113 aa7.8□□□□□ -1.16
APTX-227ENST00000485479 TIMM21Q9BVV7 248 aa7.8□□□□□ -1.16
APTX-227ENST00000485479 AP5S1Q9NUS5 200 aa7.8□□□□□ -1.16
APTX-227ENST00000485479 IGIPA6NJ69 53 aa7.79□□□□□ -1.16
APTX-227ENST00000485479 IFITM10A6NMD0 228 aa7.79□□□□□ -1.16
APTX-227ENST00000485479 EREGO14944 169 aa7.79□□□□□ -1.16
APTX-227ENST00000485479 LINC00614P0C842 121 aa7.79□□□□□ -1.16
APTX-227ENST00000485479 FOXI1Q12951 378 aa7.79□□□□□ -1.16
APTX-227ENST00000485479 TOMM6Q96B49 74 aa7.79□□□□□ -1.16
APTX-227ENST00000485479 HIGD2BQ4VC39 106 aa7.79□□□□□ -1.16
APTX-227ENST00000485479 LINC00173Q6ZV60 143 aa7.79□□□□□ -1.16
APTX-227ENST00000485479 LINC00526Q96FQ7 95 aa7.79□□□□□ -1.16
APTX-227ENST00000485479 TMEM141Q96I45 108 aa7.79□□□□□ -1.16
APTX-227ENST00000485479 LINC01546A6NGU7 62 aa7.78□□□□□ -1.16
APTX-227ENST00000485479 SS18Q15532 418 aa7.78□□□□□ -1.16
APTX-227ENST00000485479 SCGB3A1Q96QR1 104 aa7.78□□□□□ -1.16
APTX-227ENST00000485479 IGLV5-52A0A0A0MRZ9 124 aa7.77□□□□□ -1.17
APTX-227ENST00000485479 K7EMI3 77 aa7.77□□□□□ -1.17
APTX-227ENST00000485479 PRSS1P07477 247 aa7.77□□□□□ -1.17
APTX-227ENST00000485479 MRPS36P82909 103 aaKnown RBP7.77□□□□□ -1.17
APTX-227ENST00000485479 C5orf38Q86SI9 138 aa7.77□□□□□ -1.17
APTX-227ENST00000485479 C15orf56Q8N910 161 aa7.77□□□□□ -1.17
APTX-227ENST00000485479 PYGO1Q9Y3Y4 419 aa7.77□□□□□ -1.17
APTX-227ENST00000485479 LINC00310P59036 64 aa7.77□□□□□ -1.17
APTX-227ENST00000485479 HAMPP81172 84 aa7.77□□□□□ -1.17
APTX-227ENST00000485479 SMAGPQ0VAQ4 97 aa7.77□□□□□ -1.17
APTX-227ENST00000485479 TEX43Q6ZNM6 134 aa7.77□□□□□ -1.17
APTX-227ENST00000485479 BAGE3Q86Y29 109 aa7.77□□□□□ -1.17
APTX-227ENST00000485479 FAM19A2Q8N3H0 131 aa7.77□□□□□ -1.17
APTX-227ENST00000485479 NTN5Q8WTR8 489 aaPredicted RBP7.77□□□□□ -1.17
APTX-227ENST00000485479 hDV102S1A0JD36 115 aa7.76□□□□□ -1.17
APTX-227ENST00000485479 C1orf196B1AJZ1 125 aa7.76□□□□□ -1.17
APTX-227ENST00000485479 S100A1P23297 94 aa7.76□□□□□ -1.17
APTX-227ENST00000485479 COX6A2Q02221 97 aa7.76□□□□□ -1.17
APTX-227ENST00000485479 NUPR1O60356 82 aa7.75□□□□□ -1.17
APTX-227ENST00000485479 SERF1AO75920 110 aa7.75□□□□□ -1.17
APTX-227ENST00000485479 KRTAP10-1P60331 282 aa7.75□□□□□ -1.17
APTX-227ENST00000485479 Q6ZN92 141 aa7.75□□□□□ -1.17
APTX-227ENST00000485479 SVIPQ8NHG7 77 aa7.75□□□□□ -1.17
APTX-227ENST00000485479 CD164L2Q6UWJ8 174 aa7.75□□□□□ -1.17
APTX-227ENST00000485479 AMELXQ99217 191 aa7.75□□□□□ -1.17
APTX-227ENST00000485479 VCX2Q9H322 139 aa7.75□□□□□ -1.17
APTX-227ENST00000485479 HBDP02042 147 aa7.74□□□□□ -1.17
APTX-227ENST00000485479 SLPIP03973 132 aa7.74□□□□□ -1.17
APTX-227ENST00000485479 LINC00242Q5T6M2 205 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms