RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 NBDYA0A0U1RRE5 68 aa11.88□□□□□ -0.51
CHMP3-207ENST00000485465 IGIPA6NJ69 53 aa11.88□□□□□ -0.51
CHMP3-207ENST00000485465 C10orf126Q8N4M7 172 aa11.88□□□□□ -0.51
CHMP3-207ENST00000485465 SCGB3A1Q96QR1 104 aa11.88□□□□□ -0.51
CHMP3-207ENST00000485465 CDC42SE2Q9NRR3 84 aa11.88□□□□□ -0.51
CHMP3-207ENST00000485465 DNAH6Q9C0G6 4158 aa11.87□□□□□ -0.51
CHMP3-207ENST00000485465 PDZD11Q5EBL8 140 aa11.87□□□□□ -0.51
CHMP3-207ENST00000485465 TTC32Q5I0X7 151 aa11.87□□□□□ -0.51
CHMP3-207ENST00000485465 ERASQ7Z444 233 aa11.87□□□□□ -0.51
CHMP3-207ENST00000485465 ZNF664Q8N3J9 261 aa11.87□□□□□ -0.51
CHMP3-207ENST00000485465 FAM104AQ969W3 186 aa11.87□□□□□ -0.51
CHMP3-207ENST00000485465 KRTAP1-5Q9BYS1 174 aa11.87□□□□□ -0.51
CHMP3-207ENST00000485465 IBA57-AS1B1ANH7 110 aa11.86□□□□□ -0.51
CHMP3-207ENST00000485465 MRPS36P82909 103 aaKnown RBP11.86□□□□□ -0.51
CHMP3-207ENST00000485465 Q6ZUT4 128 aa11.86□□□□□ -0.51
CHMP3-207ENST00000485465 LINC00269Q8N2A0 174 aa11.86□□□□□ -0.51
CHMP3-207ENST00000485465 TMEM141Q96I45 108 aa11.86□□□□□ -0.51
CHMP3-207ENST00000485465 TIMM17AQ99595 171 aa11.86□□□□□ -0.51
CHMP3-207ENST00000485465 OPRPNQ99935 248 aaPredicted RBP11.86□□□□□ -0.51
CHMP3-207ENST00000485465 IGLV4-3A0A075B6K6 122 aa11.85□□□□□ -0.51
CHMP3-207ENST00000485465 M0R2N4 97 aa11.85□□□□□ -0.51
CHMP3-207ENST00000485465 NPSP0C0P6 89 aa11.85□□□□□ -0.51
CHMP3-207ENST00000485465 S100A6P06703 90 aa11.84□□□□□ -0.51
CHMP3-207ENST00000485465 ENHOQ6UWT2 76 aa11.84□□□□□ -0.51
CHMP3-207ENST00000485465 Q6ZR54 194 aa11.84□□□□□ -0.51
CHMP3-207ENST00000485465 PRR34Q9NV39 138 aa11.84□□□□□ -0.51
CHMP3-207ENST00000485465 REG3AQ06141 175 aa11.83□□□□□ -0.52
CHMP3-207ENST00000485465 RNASE13Q5GAN3 156 aaKnown RBP11.83□□□□□ -0.52
CHMP3-207ENST00000485465 CLPSL2Q6UWE3 100 aa11.83□□□□□ -0.52
CHMP3-207ENST00000485465 UBE2WQ96B02 151 aa11.83□□□□□ -0.52
CHMP3-207ENST00000485465 SACSQ9NZJ4 4579 aa11.82□□□□□ -0.52
CHMP3-207ENST00000485465 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-207ENST00000485465 ATP5LO75964 103 aa11.82□□□□□ -0.52
CHMP3-207ENST00000485465 CRPP02741 224 aa11.82□□□□□ -0.52
CHMP3-207ENST00000485465 LEPROTL1O95214 131 aa11.81□□□□□ -0.52
CHMP3-207ENST00000485465 PAPPA-AS1Q5QFB9 102 aa11.81□□□□□ -0.52
CHMP3-207ENST00000485465 Q6ZN92 141 aa11.81□□□□□ -0.52
CHMP3-207ENST00000485465 AMELXQ99217 191 aa11.81□□□□□ -0.52
CHMP3-207ENST00000485465 VCX2Q9H322 139 aa11.81□□□□□ -0.52
CHMP3-207ENST00000485465 KMT2AQ03164 3969 aa11.81□□□□□ -0.52
CHMP3-207ENST00000485465 TRAV8-3A0A0A6YYJ7 113 aa11.8□□□□□ -0.52
CHMP3-207ENST00000485465 IGKV3OR2-268A0A0C4DH90 116 aa11.8□□□□□ -0.52
CHMP3-207ENST00000485465 FABP4P15090 132 aa11.8□□□□□ -0.52
CHMP3-207ENST00000485465 TEX43Q6ZNM6 134 aa11.8□□□□□ -0.52
CHMP3-207ENST00000485465 LINC00173Q6ZV60 143 aa11.8□□□□□ -0.52
CHMP3-207ENST00000485465 Q9HAA7 133 aa11.8□□□□□ -0.52
CHMP3-207ENST00000485465 MIAQ16674 131 aa11.79□□□□□ -0.52
CHMP3-207ENST00000485465 ZC2HC1BQ5TFG8 222 aa11.79□□□□□ -0.52
CHMP3-207ENST00000485465 BAALCQ8WXS3 180 aa11.79□□□□□ -0.52
CHMP3-207ENST00000485465 IFI27L1Q96BM0 104 aa11.79□□□□□ -0.52
CHMP3-207ENST00000485465 HSPB8Q9UJY1 196 aa11.79□□□□□ -0.52
CHMP3-207ENST00000485465 TMA7Q9Y2S6 64 aaKnown RBP11.79□□□□□ -0.52
CHMP3-207ENST00000485465 HYDINQ4G0P3 5121 aa11.78□□□□□ -0.52
CHMP3-207ENST00000485465 LINC00959A0A1B0GUT2 108 aa11.78□□□□□ -0.52
CHMP3-207ENST00000485465 IFITM10A6NMD0 228 aa11.78□□□□□ -0.52
CHMP3-207ENST00000485465 SNRPEP62304 92 aaKnown RBP11.78□□□□□ -0.52
CHMP3-207ENST00000485465 HIST3H2BBQ8N257 126 aa11.78□□□□□ -0.52
CHMP3-207ENST00000485465 TRAV13-1A0A0B4J241 112 aa11.77□□□□□ -0.53
CHMP3-207ENST00000485465 TRAV8-4A0A0B4J246 113 aa11.77□□□□□ -0.53
CHMP3-207ENST00000485465 C5orf52A6NGY3 159 aa11.77□□□□□ -0.53
CHMP3-207ENST00000485465 PACRGQ96M98 296 aaPredicted RBP11.77□□□□□ -0.53
CHMP3-207ENST00000485465 C2orf88Q9BSF0 95 aa11.77□□□□□ -0.53
CHMP3-207ENST00000485465 PMVKQ15126 192 aa11.76□□□□□ -0.53
CHMP3-207ENST00000485465 SS18Q15532 418 aa11.76□□□□□ -0.53
CHMP3-207ENST00000485465 CST9LQ9H4G1 147 aa11.76□□□□□ -0.53
CHMP3-207ENST00000485465 IGLV10-54A0A075B6I4 117 aa11.75□□□□□ -0.53
CHMP3-207ENST00000485465 IGKV2D-24A0A075B6R9 120 aa11.75□□□□□ -0.53
CHMP3-207ENST00000485465 CCL25O15444 150 aa11.75□□□□□ -0.53
CHMP3-207ENST00000485465 PRSS1P07477 247 aa11.75□□□□□ -0.53
CHMP3-207ENST00000485465 NFE4Q86UQ8 179 aa11.75□□□□□ -0.53
CHMP3-207ENST00000485465 C6orf223Q8N319 242 aa11.75□□□□□ -0.53
CHMP3-207ENST00000485465 RMI2Q96E14 147 aa11.75□□□□□ -0.53
CHMP3-207ENST00000485465 C1orf43Q9BWL3 253 aa11.75□□□□□ -0.53
CHMP3-207ENST00000485465 KMT2CQ8NEZ4 4911 aaKnown RBP11.74□□□□□ -0.53
CHMP3-207ENST00000485465 PRSS29PA6NIE9 313 aa11.74□□□□□ -0.53
CHMP3-207ENST00000485465 S100A2P29034 98 aa11.74□□□□□ -0.53
CHMP3-207ENST00000485465 UBE2D1P51668 147 aa11.74□□□□□ -0.53
CHMP3-207ENST00000485465 C1orf134Q5TEV5 83 aa11.74□□□□□ -0.53
CHMP3-207ENST00000485465 CHCHD10Q8WYQ3 142 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-207ENST00000485465 TM2D2Q9BX73 214 aa11.73□□□□□ -0.53
CHMP3-207ENST00000485465 RYR2Q92736 4967 aa11.72□□□□□ -0.53
CHMP3-207ENST00000485465 TRAV12-1A0A0B4J245 112 aa11.72□□□□□ -0.53
CHMP3-207ENST00000485465 KRTAP26-1Q6PEX3 210 aa11.72□□□□□ -0.53
CHMP3-207ENST00000485465 Q6ZRN7 208 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-207ENST00000485465 HIST1H2BLQ99880 126 aa11.72□□□□□ -0.53
CHMP3-207ENST00000485465 MAP1LC3CQ9BXW4 147 aa11.72□□□□□ -0.53
CHMP3-207ENST00000485465 COX11Q9Y6N1 276 aa11.72□□□□□ -0.53
CHMP3-207ENST00000485465 XCL1P47992 114 aa11.71□□□□□ -0.53
CHMP3-207ENST00000485465 LINC00242Q5T6M2 205 aa11.71□□□□□ -0.53
CHMP3-207ENST00000485465 FAM19A3Q7Z5A8 133 aa11.71□□□□□ -0.53
CHMP3-207ENST00000485465 A0A0J9YXV3 536 aa11.7□□□□□ -0.54
CHMP3-207ENST00000485465 GAGE12HA6NDE8 117 aa11.7□□□□□ -0.54
CHMP3-207ENST00000485465 H0Y8G0 127 aa11.7□□□□□ -0.54
CHMP3-207ENST00000485465 CD164L2Q6UWJ8 174 aa11.7□□□□□ -0.54
CHMP3-207ENST00000485465 DNAH2Q9P225 4427 aa11.69□□□□□ -0.54
CHMP3-207ENST00000485465 FOXI1Q12951 378 aa11.69□□□□□ -0.54
CHMP3-207ENST00000485465 CHTOPQ9Y3Y2 248 aaKnown RBP11.69□□□□□ -0.54
CHMP3-207ENST00000485465 SYS1-DBNDD2H3BUS1 97 aa11.68□□□□□ -0.54
CHMP3-207ENST00000485465 PSCAO43653 123 aa11.68□□□□□ -0.54
CHMP3-207ENST00000485465 C3orf79P0CE67 100 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms