RNA–Protein interactions for RNA: ENST00000484620.1

PDLIM4-207, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-207ENST00000484620 PYGO1Q9Y3Y4 419 aa12.86□□□□□ -0.35
PDLIM4-207ENST00000484620 DNAH6Q9C0G6 4158 aa12.85□□□□□ -0.35
PDLIM4-207ENST00000484620 KMT2CQ8NEZ4 4911 aaKnown RBP12.84□□□□□ -0.35
PDLIM4-207ENST00000484620 TRAV8-3A0A0A6YYJ7 113 aa12.84□□□□□ -0.35
PDLIM4-207ENST00000484620 LINC00269Q8N2A0 174 aa12.84□□□□□ -0.35
PDLIM4-207ENST00000484620 ZNF664Q8N3J9 261 aa12.84□□□□□ -0.35
PDLIM4-207ENST00000484620 UBE2WQ96B02 151 aa12.84□□□□□ -0.35
PDLIM4-207ENST00000484620 CDC42SE2Q9NRR3 84 aa12.84□□□□□ -0.35
PDLIM4-207ENST00000484620 NPSP0C0P6 89 aa12.83□□□□□ -0.36
PDLIM4-207ENST00000484620 MRPS36P82909 103 aaKnown RBP12.83□□□□□ -0.36
PDLIM4-207ENST00000484620 REG3AQ06141 175 aa12.83□□□□□ -0.36
PDLIM4-207ENST00000484620 PMCHL1Q16048 86 aa12.83□□□□□ -0.36
PDLIM4-207ENST00000484620 SCGB3A1Q96QR1 104 aa12.83□□□□□ -0.36
PDLIM4-207ENST00000484620 TIMM17AQ99595 171 aa12.83□□□□□ -0.36
PDLIM4-207ENST00000484620 LINC00310P59036 64 aa12.82□□□□□ -0.36
PDLIM4-207ENST00000484620 CLPSL2Q6UWE3 100 aa12.82□□□□□ -0.36
PDLIM4-207ENST00000484620 Q6ZUT4 128 aa12.82□□□□□ -0.36
PDLIM4-207ENST00000484620 ERASQ7Z444 233 aa12.82□□□□□ -0.36
PDLIM4-207ENST00000484620 TMEM141Q96I45 108 aa12.82□□□□□ -0.36
PDLIM4-207ENST00000484620 PRR34Q9NV39 138 aa12.82□□□□□ -0.36
PDLIM4-207ENST00000484620 A0A096LNJ9 63 aa12.81□□□□□ -0.36
PDLIM4-207ENST00000484620 IGIPA6NJ69 53 aa12.81□□□□□ -0.36
PDLIM4-207ENST00000484620 NDUFA6P56556 154 aa12.81□□□□□ -0.36
PDLIM4-207ENST00000484620 MIAQ16674 131 aa12.81□□□□□ -0.36
PDLIM4-207ENST00000484620 PAPPA-AS1Q5QFB9 102 aa12.81□□□□□ -0.36
PDLIM4-207ENST00000484620 Q6ZN92 141 aa12.81□□□□□ -0.36
PDLIM4-207ENST00000484620 NFE4Q86UQ8 179 aa12.81□□□□□ -0.36
PDLIM4-207ENST00000484620 RMI2Q96E14 147 aa12.81□□□□□ -0.36
PDLIM4-207ENST00000484620 Q9HAA7 133 aa12.81□□□□□ -0.36
PDLIM4-207ENST00000484620 SACSQ9NZJ4 4579 aa12.81□□□□□ -0.36
PDLIM4-207ENST00000484620 IGLV4-3A0A075B6K6 122 aa12.8□□□□□ -0.36
PDLIM4-207ENST00000484620 COA6Q5JTJ3 125 aaKnown RBP12.8□□□□□ -0.36
PDLIM4-207ENST00000484620 ENHOQ6UWT2 76 aa12.8□□□□□ -0.36
PDLIM4-207ENST00000484620 C6orf223Q8N319 242 aa12.8□□□□□ -0.36
PDLIM4-207ENST00000484620 IGKV3OR2-268A0A0C4DH90 116 aa12.79□□□□□ -0.36
PDLIM4-207ENST00000484620 PDZD11Q5EBL8 140 aa12.79□□□□□ -0.36
PDLIM4-207ENST00000484620 C1orf134Q5TEV5 83 aa12.79□□□□□ -0.36
PDLIM4-207ENST00000484620 FAM19A2Q8N3H0 131 aa12.79□□□□□ -0.36
PDLIM4-207ENST00000484620 OPRPNQ99935 248 aaPredicted RBP12.79□□□□□ -0.36
PDLIM4-207ENST00000484620 TRAV8-4A0A0B4J246 113 aa12.78□□□□□ -0.36
PDLIM4-207ENST00000484620 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.78□□□□□ -0.36
PDLIM4-207ENST00000484620 NUPR1O60356 82 aa12.78□□□□□ -0.36
PDLIM4-207ENST00000484620 ATP5LO75964 103 aa12.78□□□□□ -0.36
PDLIM4-207ENST00000484620 RNASE13Q5GAN3 156 aaKnown RBP12.78□□□□□ -0.36
PDLIM4-207ENST00000484620 TEX43Q6ZNM6 134 aa12.78□□□□□ -0.36
PDLIM4-207ENST00000484620 C1orf43Q9BWL3 253 aa12.78□□□□□ -0.36
PDLIM4-207ENST00000484620 VCX2Q9H322 139 aa12.78□□□□□ -0.36
PDLIM4-207ENST00000484620 KMT2AQ03164 3969 aa12.77□□□□□ -0.36
PDLIM4-207ENST00000484620 FAM104AQ969W3 186 aa12.77□□□□□ -0.37
PDLIM4-207ENST00000484620 C2orf88Q9BSF0 95 aa12.77□□□□□ -0.37
PDLIM4-207ENST00000484620 TM2D2Q9BX73 214 aa12.77□□□□□ -0.37
PDLIM4-207ENST00000484620 COX11Q9Y6N1 276 aa12.77□□□□□ -0.37
PDLIM4-207ENST00000484620 IGKV2D-24A0A075B6R9 120 aa12.76□□□□□ -0.37
PDLIM4-207ENST00000484620 S100A6P06703 90 aa12.76□□□□□ -0.37
PDLIM4-207ENST00000484620 HYDINQ4G0P3 5121 aa12.76□□□□□ -0.37
PDLIM4-207ENST00000484620 IFITM10A6NMD0 228 aa12.75□□□□□ -0.37
PDLIM4-207ENST00000484620 CCL25O15444 150 aa12.75□□□□□ -0.37
PDLIM4-207ENST00000484620 SS18Q15532 418 aa12.75□□□□□ -0.37
PDLIM4-207ENST00000484620 TRAV13-1A0A0B4J241 112 aa12.74□□□□□ -0.37
PDLIM4-207ENST00000484620 LINC00959A0A1B0GUT2 108 aa12.74□□□□□ -0.37
PDLIM4-207ENST00000484620 LEPROTL1O95214 131 aa12.74□□□□□ -0.37
PDLIM4-207ENST00000484620 AMELXQ99217 191 aa12.74□□□□□ -0.37
PDLIM4-207ENST00000484620 RYR2Q92736 4967 aa12.74□□□□□ -0.37
PDLIM4-207ENST00000484620 IGLV10-54A0A075B6I4 117 aa12.73□□□□□ -0.37
PDLIM4-207ENST00000484620 PSCAO43653 123 aa12.73□□□□□ -0.37
PDLIM4-207ENST00000484620 HSPB8Q9UJY1 196 aa12.73□□□□□ -0.37
PDLIM4-207ENST00000484620 BAALCQ8WXS3 180 aa12.72□□□□□ -0.37
PDLIM4-207ENST00000484620 IFI27L1Q96BM0 104 aa12.72□□□□□ -0.37
PDLIM4-207ENST00000484620 PMVKQ15126 192 aa12.71□□□□□ -0.37
PDLIM4-207ENST00000484620 LINC00173Q6ZV60 143 aa12.71□□□□□ -0.37
PDLIM4-207ENST00000484620 CHCHD10Q8WYQ3 142 aaPredicted RBP12.71□□□□□ -0.37
PDLIM4-207ENST00000484620 FABP4P15090 132 aa12.7□□□□□ -0.38
PDLIM4-207ENST00000484620 ZC2HC1BQ5TFG8 222 aa12.7□□□□□ -0.38
PDLIM4-207ENST00000484620 Q6ZRN7 208 aaPredicted RBP12.7□□□□□ -0.38
PDLIM4-207ENST00000484620 PACRGQ96M98 296 aaPredicted RBP12.7□□□□□ -0.38
PDLIM4-207ENST00000484620 PRSS1P07477 247 aa12.69□□□□□ -0.38
PDLIM4-207ENST00000484620 XCL1P47992 114 aa12.69□□□□□ -0.38
PDLIM4-207ENST00000484620 CST9LQ9H4G1 147 aa12.69□□□□□ -0.38
PDLIM4-207ENST00000484620 RYR3Q15413 4870 aa12.68□□□□□ -0.38
PDLIM4-207ENST00000484620 GAGE12HA6NDE8 117 aa12.68□□□□□ -0.38
PDLIM4-207ENST00000484620 UBE2D1P51668 147 aa12.68□□□□□ -0.38
PDLIM4-207ENST00000484620 SEC11AP67812 179 aa12.67□□□□□ -0.38
PDLIM4-207ENST00000484620 CD164L2Q6UWJ8 174 aa12.67□□□□□ -0.38
PDLIM4-207ENST00000484620 PRSS29PA6NIE9 313 aa12.66□□□□□ -0.38
PDLIM4-207ENST00000484620 RTL8CO15255 209 aa12.66□□□□□ -0.38
PDLIM4-207ENST00000484620 S100A2P29034 98 aa12.66□□□□□ -0.38
PDLIM4-207ENST00000484620 KRTAP26-1Q6PEX3 210 aa12.66□□□□□ -0.38
PDLIM4-207ENST00000484620 TRAV12-1A0A0B4J245 112 aa12.65□□□□□ -0.38
PDLIM4-207ENST00000484620 LINC00242Q5T6M2 205 aa12.65□□□□□ -0.38
PDLIM4-207ENST00000484620 FAM19A3Q7Z5A8 133 aa12.65□□□□□ -0.38
PDLIM4-207ENST00000484620 MAP1LC3CQ9BXW4 147 aa12.65□□□□□ -0.38
PDLIM4-207ENST00000484620 SNRPEP62304 92 aaKnown RBP12.64□□□□□ -0.39
PDLIM4-207ENST00000484620 FOXI1Q12951 378 aa12.64□□□□□ -0.39
PDLIM4-207ENST00000484620 LINC00336Q6ZUF6 198 aa12.64□□□□□ -0.39
PDLIM4-207ENST00000484620 HIST3H2BBQ8N257 126 aa12.64□□□□□ -0.39
PDLIM4-207ENST00000484620 GEMIN7Q9H840 131 aaKnown RBP12.64□□□□□ -0.39
PDLIM4-207ENST00000484620 HERVK_113P63121 156 aa12.63□□□□□ -0.39
PDLIM4-207ENST00000484620 A0A0J9YXV3 536 aa12.62□□□□□ -0.39
PDLIM4-207ENST00000484620 H0Y8G0 127 aa12.62□□□□□ -0.39
PDLIM4-207ENST00000484620 COX7A2LO14548 114 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms