RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 C12orf73Q69YU5 71 aa-0.13□□□□□ -2.43
SCAF11-207ENST00000484275 SMIM4Q8WVI0 70 aa-0.13□□□□□ -2.43
SCAF11-207ENST00000484275 AQP10Q96PS8 301 aa-0.13□□□□□ -2.43
SCAF11-207ENST00000484275 SDF2Q99470 211 aa-0.13□□□□□ -2.43
SCAF11-207ENST00000484275 SCN3BQ9NY72 215 aa-0.13□□□□□ -2.43
SCAF11-207ENST00000484275 SPCS1Q9Y6A9 102 aa-0.13□□□□□ -2.43
SCAF11-207ENST00000484275 R4GMQ9 66 aa-0.13□□□□□ -2.43
SCAF11-207ENST00000484275 COL12A1Q99715 3063 aa-0.13□□□□□ -2.43
SCAF11-207ENST00000484275 NUP188Q5SRE5 1749 aa-0.13□□□□□ -2.43
SCAF11-207ENST00000484275 SPTBN1Q01082 2364 aaKnown RBP-0.13□□□□□ -2.43
SCAF11-207ENST00000484275 PPIP5K1Q6PFW1 1433 aa-0.13□□□□□ -2.43
SCAF11-207ENST00000484275 HERC2O95714 4834 aa-0.13□□□□□ -2.43
SCAF11-207ENST00000484275 LPAP08519 4548 aa-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 FAT2Q9NYQ8 4349 aa-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 PRKDCP78527 4128 aaKnown RBP-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 GVINP1Q7Z2Y8 2422 aa-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 ROBO1Q9Y6N7 1651 aa-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 MYO7BQ6PIF6 2116 aa-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 CHD8Q9HCK8 2581 aa-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 TRAV13-2A0A0B4J235 113 aa-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 LOC105371267A0A1B0GV96 52 aa-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 S100A3P33764 101 aa-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 ARPC4P59998 168 aa-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 DEFB109BQ30KR1 87 aa-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 LENEPQ9Y5L5 61 aa-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 ACANP16112 2415 aa-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 SRRM2Q9UQ35 2752 aaKnown RBP-0.14□□□□□ -2.43
SCAF11-207ENST00000484275 HSPG2P98160 4391 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 TEP1Q99973 2627 aaKnown RBP-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 HCG22E2RYF7 251 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 PPP1R17O96001 155 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 LRP2P98164 4655 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 COX17Q14061 63 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 Q6AWC8 147 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 Q8IZM0 81 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 DPH3Q96FX2 82 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 PDCD10Q9BUL8 212 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 RERGLQ9H628 205 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 NPVFQ9HCQ7 196 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 SCN7AQ01118 1682 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 LAMA5O15230 3695 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 FAT1Q14517 4588 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 ARHGEF5Q12774 1597 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 USF3Q68DE3 2245 aa-0.15□□□□□ -2.43
SCAF11-207ENST00000484275 COL6A5A8TX70 2615 aa-0.16□□□□□ -2.43
SCAF11-207ENST00000484275 DNHD1Q96M86 4753 aa-0.16□□□□□ -2.43
SCAF11-207ENST00000484275 SPTA1P02549 2419 aa-0.16□□□□□ -2.43
SCAF11-207ENST00000484275 CTXND1A0A1B0GTU2 59 aa-0.16□□□□□ -2.44
SCAF11-207ENST00000484275 SPRR2DP22532 72 aa-0.16□□□□□ -2.44
SCAF11-207ENST00000484275 Q8N8P6 123 aa-0.16□□□□□ -2.44
SCAF11-207ENST00000484275 SNRNP25Q9BV90 132 aaKnown RBP-0.16□□□□□ -2.44
SCAF11-207ENST00000484275 FLNBO75369 2602 aaKnown RBP-0.16□□□□□ -2.44
SCAF11-207ENST00000484275 NAIPQ13075 1403 aa-0.16□□□□□ -2.44
SCAF11-207ENST00000484275 C10orf71Q711Q0 1435 aa-0.16□□□□□ -2.44
SCAF11-207ENST00000484275 ALMS1Q8TCU4 4167 aa-0.16□□□□□ -2.44
SCAF11-207ENST00000484275 STARD9Q9P2P6 4700 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 M0R135 149 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 HAMPP81172 84 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 DCDP81605 110 aaKnown RBP-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 SPAG11BQ08648 103 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 C10orf128Q5T292 105 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 SPAG11AQ6PDA7 123 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 TTC9CQ8N5M4 171 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 ARL11Q969Q4 196 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 AMELXQ99217 191 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 AGPAT4-IT1Q9H0P7 198 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 NAA60Q9H7X0 242 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 TP53AIP1Q9HCN2 124 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 SERP1Q9Y6X1 66 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 V9GYH0 126 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 NBEAL1Q6ZS30 2694 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 MBD5Q9P267 1494 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 ZFHX3Q15911 3703 aa-0.17□□□□□ -2.44
SCAF11-207ENST00000484275 BIRC6Q9NR09 4857 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 LAMA2P24043 3122 aaKnown RBP-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 ARHGEF12Q9NZN5 1544 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 CHD1O14646 1710 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 EIF4G3O43432 1585 aaKnown RBP-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 USP9XQ93008 2570 aaPredicted RBP-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 CPSF1Q10570 1443 aaKnown RBP-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 FAM25AB3EWG3 89 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 FAM25CB3EWG5 89 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 FAM25GB3EWG6 89 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 I3L2K1 104 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 BCE1O60756 84 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 HIST1H1DP16402 221 aaKnown RBP-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 SPRR1AP35321 89 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 SELENOWP63302 87 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 RBM3P98179 157 aaKnown RBP-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 KRTAP6-1Q3LI64 71 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 LSM10Q969L4 123 aaKnown RBP-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 LINC00470Q9BZP3 86 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 LYSTQ99698 3801 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 LRP1BQ9NZR2 4599 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 HECTD1Q9ULT8 2610 aa-0.18□□□□□ -2.44
SCAF11-207ENST00000484275 DIP2CQ9Y2E4 1556 aa-0.19□□□□□ -2.44
SCAF11-207ENST00000484275 CSPG4Q6UVK1 2322 aa-0.19□□□□□ -2.44
SCAF11-207ENST00000484275 SMG6Q86US8 1419 aaKnown RBP-0.19□□□□□ -2.44
SCAF11-207ENST00000484275 TOP2BQ02880 1626 aa-0.19□□□□□ -2.44
SCAF11-207ENST00000484275 TGP01266 2768 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms