RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 LAMTOR2Q9Y2Q5 125 aa17.55■□□□□ 0.4
SMDT1-203ENST00000484235 OR5A1Q8NGJ0 315 aa17.54■□□□□ 0.4
SMDT1-203ENST00000484235 CDK2AP2O75956 126 aa17.53■□□□□ 0.4
SMDT1-203ENST00000484235 HLA-DQA1P01909 254 aa17.53■□□□□ 0.4
SMDT1-203ENST00000484235 GCSHP23434 173 aa17.53■□□□□ 0.4
SMDT1-203ENST00000484235 SMAGPQ0VAQ4 97 aa17.53■□□□□ 0.4
SMDT1-203ENST00000484235 APOC3P02656 99 aa17.52■□□□□ 0.4
SMDT1-203ENST00000484235 NDUFA5Q16718 116 aa17.52■□□□□ 0.4
SMDT1-203ENST00000484235 PRSS47A8MTI9 375 aa17.51■□□□□ 0.39
SMDT1-203ENST00000484235 C14orf177Q52M58 125 aa17.51■□□□□ 0.39
SMDT1-203ENST00000484235 TMEM18Q96B42 140 aa17.51■□□□□ 0.39
SMDT1-203ENST00000484235 IGKV3OR2-268A0A0C4DH90 116 aa17.5■□□□□ 0.39
SMDT1-203ENST00000484235 DGAT2L7PQ6IED9 249 aa17.5■□□□□ 0.39
SMDT1-203ENST00000484235 CDC42SE2Q9NRR3 84 aa17.5■□□□□ 0.39
SMDT1-203ENST00000484235 CSDC2Q9Y534 153 aaKnown RBP17.5■□□□□ 0.39
SMDT1-203ENST00000484235 APOBP04114 4563 aaKnown RBP17.49■□□□□ 0.39
SMDT1-203ENST00000484235 SVBPQ8N300 66 aa17.49■□□□□ 0.39
SMDT1-203ENST00000484235 ZNF664Q8N3J9 261 aa17.49■□□□□ 0.39
SMDT1-203ENST00000484235 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.48■□□□□ 0.39
SMDT1-203ENST00000484235 USP17L23D6RBM5 183 aa17.48■□□□□ 0.39
SMDT1-203ENST00000484235 KRTAP10-1P60331 282 aa17.48■□□□□ 0.39
SMDT1-203ENST00000484235 MAP1LC3AQ9H492 121 aa17.48■□□□□ 0.39
SMDT1-203ENST00000484235 UBE2D4Q9Y2X8 147 aa17.48■□□□□ 0.39
SMDT1-203ENST00000484235 SNAPINO95295 136 aa17.47■□□□□ 0.39
SMDT1-203ENST00000484235 RAB5AP20339 215 aa17.47■□□□□ 0.39
SMDT1-203ENST00000484235 GNB1LQ9BYB4 327 aa17.47■□□□□ 0.39
SMDT1-203ENST00000484235 TIMM21Q9BVV7 248 aa17.46■□□□□ 0.39
SMDT1-203ENST00000484235 LOC389332A0A1B0GUA5 103 aa17.45■□□□□ 0.38
SMDT1-203ENST00000484235 COX19Q49B96 90 aa17.45■□□□□ 0.38
SMDT1-203ENST00000484235 CHCHD10Q8WYQ3 142 aaPredicted RBP17.44■□□□□ 0.38
SMDT1-203ENST00000484235 LINC00959A0A1B0GUT2 108 aa17.43■□□□□ 0.38
SMDT1-203ENST00000484235 GAGE12HA6NDE8 117 aa17.43■□□□□ 0.38
SMDT1-203ENST00000484235 Q8N8P6 123 aa17.42■□□□□ 0.38
SMDT1-203ENST00000484235 PRSS1P07477 247 aa17.41■□□□□ 0.38
SMDT1-203ENST00000484235 RPL39P62891 51 aaKnown RBP17.41■□□□□ 0.38
SMDT1-203ENST00000484235 KIAA1644Q3SXP7 199 aa17.41■□□□□ 0.38
SMDT1-203ENST00000484235 SS18Q15532 418 aa17.4■□□□□ 0.38
SMDT1-203ENST00000484235 SPANXA1Q9NS26 97 aa17.4■□□□□ 0.38
SMDT1-203ENST00000484235 MT-ND6P03923 174 aa17.39■□□□□ 0.37
SMDT1-203ENST00000484235 K7EMI3 77 aa17.38■□□□□ 0.37
SMDT1-203ENST00000484235 NXT2Q9NPJ8 142 aaKnown RBP17.38■□□□□ 0.37
SMDT1-203ENST00000484235 CCL25O15444 150 aa17.37■□□□□ 0.37
SMDT1-203ENST00000484235 XCL1P47992 114 aa17.37■□□□□ 0.37
SMDT1-203ENST00000484235 CFAP161Q6P656 301 aa17.37■□□□□ 0.37
SMDT1-203ENST00000484235 FOXI1Q12951 378 aa17.36■□□□□ 0.37
SMDT1-203ENST00000484235 Q8N1X5 172 aa17.36■□□□□ 0.37
SMDT1-203ENST00000484235 TGIF2-C20orf24A0A0A6YYL0 155 aa17.35■□□□□ 0.37
SMDT1-203ENST00000484235 C1orf196B1AJZ1 125 aa17.35■□□□□ 0.37
SMDT1-203ENST00000484235 MRPS36P82909 103 aaKnown RBP17.35■□□□□ 0.37
SMDT1-203ENST00000484235 ORMDL2Q53FV1 153 aa17.35■□□□□ 0.37
SMDT1-203ENST00000484235 RNASE13Q5GAN3 156 aaKnown RBP17.35■□□□□ 0.37
SMDT1-203ENST00000484235 Q6ZUT4 128 aa17.35■□□□□ 0.37
SMDT1-203ENST00000484235 SLC7A5P1Q8MH63 180 aa17.35■□□□□ 0.37
SMDT1-203ENST00000484235 MRPL18Q9H0U6 180 aaKnown RBP17.35■□□□□ 0.37
SMDT1-203ENST00000484235 hDV102S1A0JD36 115 aa17.34■□□□□ 0.37
SMDT1-203ENST00000484235 IFI27P40305 119 aaPredicted RBP17.34■□□□□ 0.37
SMDT1-203ENST00000484235 XGP55808 180 aa17.34■□□□□ 0.37
SMDT1-203ENST00000484235 FABP9Q0Z7S8 132 aa17.34■□□□□ 0.37
SMDT1-203ENST00000484235 CD164L2Q6UWJ8 174 aa17.34■□□□□ 0.37
SMDT1-203ENST00000484235 ALKBH7Q9BT30 221 aaPredicted RBP17.34■□□□□ 0.37
SMDT1-203ENST00000484235 PYGO1Q9Y3Y4 419 aa17.34■□□□□ 0.37
SMDT1-203ENST00000484235 FAM104AQ969W3 186 aa17.33■□□□□ 0.36
SMDT1-203ENST00000484235 LINC01620Q4KN68 170 aa17.32■□□□□ 0.36
SMDT1-203ENST00000484235 TRAV13-1A0A0B4J241 112 aa17.31■□□□□ 0.36
SMDT1-203ENST00000484235 C15orf56Q8N910 161 aa17.31■□□□□ 0.36
SMDT1-203ENST00000484235 OPRPNQ99935 248 aaPredicted RBP17.31■□□□□ 0.36
SMDT1-203ENST00000484235 PRSS3P2Q8NHM4 247 aa17.3■□□□□ 0.36
SMDT1-203ENST00000484235 AP5S1Q9NUS5 200 aa17.3■□□□□ 0.36
SMDT1-203ENST00000484235 FAM30AQ9NZY2 134 aa17.3■□□□□ 0.36
SMDT1-203ENST00000484235 CYSLTR1Q9Y271 337 aa17.3■□□□□ 0.36
SMDT1-203ENST00000484235 G0S2P27469 103 aa17.29■□□□□ 0.36
SMDT1-203ENST00000484235 CNBPP62633 177 aaKnown RBP17.29■□□□□ 0.36
SMDT1-203ENST00000484235 C2orf66Q6UXQ4 117 aa17.29■□□□□ 0.36
SMDT1-203ENST00000484235 C9orf163Q8N9P6 203 aa17.28■□□□□ 0.36
SMDT1-203ENST00000484235 TRAPPC1Q9Y5R8 145 aa17.28■□□□□ 0.36
SMDT1-203ENST00000484235 Q6ZSA8 131 aa17.27■□□□□ 0.36
SMDT1-203ENST00000484235 HERC1Q15751 4861 aa17.27■□□□□ 0.36
SMDT1-203ENST00000484235 DNAH8Q96JB1 4490 aa17.25■□□□□ 0.35
SMDT1-203ENST00000484235 GVQW2A0A096LPI5 108 aaPredicted RBP17.25■□□□□ 0.35
SMDT1-203ENST00000484235 IGHV1-58A0A0C4DH39 117 aa17.25■□□□□ 0.35
SMDT1-203ENST00000484235 YPEL4Q96NS1 127 aa17.25■□□□□ 0.35
SMDT1-203ENST00000484235 IGLV4-3A0A075B6K6 122 aa17.24■□□□□ 0.35
SMDT1-203ENST00000484235 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.24■□□□□ 0.35
SMDT1-203ENST00000484235 SLPIP03973 132 aa17.24■□□□□ 0.35
SMDT1-203ENST00000484235 TMEM141Q96I45 108 aa17.24■□□□□ 0.35
SMDT1-203ENST00000484235 LINC01546A6NGU7 62 aa17.23■□□□□ 0.35
SMDT1-203ENST00000484235 IFITM10A6NMD0 228 aa17.23■□□□□ 0.35
SMDT1-203ENST00000484235 COX7A2LO14548 114 aa17.23■□□□□ 0.35
SMDT1-203ENST00000484235 NPSP0C0P6 89 aa17.23■□□□□ 0.35
SMDT1-203ENST00000484235 HIGD2BQ4VC39 106 aa17.23■□□□□ 0.35
SMDT1-203ENST00000484235 IGIPA6NJ69 53 aa17.22■□□□□ 0.35
SMDT1-203ENST00000484235 SMCO4Q9NRQ5 59 aa17.22■□□□□ 0.35
SMDT1-203ENST00000484235 MALP21145 153 aa17.21■□□□□ 0.35
SMDT1-203ENST00000484235 Q6ZN92 141 aa17.2■□□□□ 0.34
SMDT1-203ENST00000484235 TOMM6Q96B49 74 aa17.2■□□□□ 0.34
SMDT1-203ENST00000484235 HAMPP81172 84 aa17.19■□□□□ 0.34
SMDT1-203ENST00000484235 TEX43Q6ZNM6 134 aa17.19■□□□□ 0.34
SMDT1-203ENST00000484235 FA2HQ7L5A8 372 aa17.19■□□□□ 0.34
SMDT1-203ENST00000484235 VCX2Q9H322 139 aa17.19■□□□□ 0.34
SMDT1-203ENST00000484235 SDIM1Q6ZPB5 146 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms