RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 LITAFQ99732 161 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 EPDR1Q9UM22 224 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 KIF25-AS1Q9Y6Z4 181 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 ARL2-SNX15V9GYD0 113 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 TMSB15BA0A087X1C1 80 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 CTXND1A0A1B0GTU2 59 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 STAG3L2P0CL84 134 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 STAG3L3P0CL85 134 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 RPL35P42766 123 aaKnown RBP3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 PKIAP61925 76 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 CNBPP62633 177 aaKnown RBP3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 GAGE2BQ13066 116 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 GAGE2EQ4V326 116 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 GAGE2AQ6NT46 116 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 Q86TA4 180 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 GTSF1Q8WW33 167 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 RNF185Q96GF1 192 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 YPEL4Q96NS1 127 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 ACTR3CQ9C0K3 210 aaPredicted RBP3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 SMDT1Q9H4I9 107 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 PRR34Q9NV39 138 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 GAGE2DQ9UEU5 116 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 VAX2Q9UIW0 290 aa3.76□□□□□ -1.81
SEMA3D-204ENST00000484038 A0A0J9YXV3 536 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 C1orf196B1AJZ1 125 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 SH2D1AO60880 128 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 CXorf1O96002 111 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 IFNA1P01562 189 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 MT-ND4LP03901 98 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 CXCL1P09341 107 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 RAB5AP20339 215 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 AKR1D1P51857 326 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 UBE2G2P60604 165 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 RAB5BP61020 215 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 RBX1P62877 108 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 PRR3P79522 188 aaKnown RBP3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 ZNF674Q2M3X9 581 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 KRTAP26-1Q6PEX3 210 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 OR10G8Q8NGN5 311 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 TMEM167BQ9NRX6 74 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 TGIF2-C20orf24A0A0A6YYL0 155 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 IGKV2-24A0A0C4DH68 120 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 PEX7O00628 323 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 MBP02144 154 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 CRIP1P50238 77 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 RAB4BP61018 213 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 MEF2BQ02080 365 aaPredicted RBP3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 REG3AQ06141 175 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 KIAA1644Q3SXP7 199 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 DNLZQ5SXM8 178 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 FAM162BQ5T6X4 162 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 DERL1Q9BUN8 251 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 BIN3Q9NQY0 253 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 PLAC8Q9NZF1 115 aa3.75□□□□□ -1.81
SEMA3D-204ENST00000484038 TRBV25-1A0A075B6N4 114 aa3.74□□□□□ -1.81
SEMA3D-204ENST00000484038 VPREB1P12018 145 aa3.74□□□□□ -1.81
SEMA3D-204ENST00000484038 RPS10P46783 165 aaKnown RBP3.74□□□□□ -1.81
SEMA3D-204ENST00000484038 COX6A2Q02221 97 aa3.74□□□□□ -1.81
SEMA3D-204ENST00000484038 COTL1Q14019 142 aa3.74□□□□□ -1.81
SEMA3D-204ENST00000484038 ADIRFQ15847 76 aa3.74□□□□□ -1.81
SEMA3D-204ENST00000484038 TMEM97Q5BJF2 176 aa3.74□□□□□ -1.81
SEMA3D-204ENST00000484038 CST9LP1Q5W188 147 aa3.74□□□□□ -1.81
SEMA3D-204ENST00000484038 REG3GQ6UW15 175 aa3.74□□□□□ -1.81
SEMA3D-204ENST00000484038 NTM-AS1Q6ZSK4 140 aa3.74□□□□□ -1.81
SEMA3D-204ENST00000484038 SMIM7Q9BQ49 75 aa3.74□□□□□ -1.81
SEMA3D-204ENST00000484038 MANBALQ9NQG1 85 aa3.74□□□□□ -1.81
SEMA3D-204ENST00000484038 MUC21A0A0G2JKD1 596 aa3.73□□□□□ -1.81
SEMA3D-204ENST00000484038 TRBV6-1A0A0K0K1D8 114 aa3.73□□□□□ -1.81
SEMA3D-204ENST00000484038 A0A1W2PRE2 83 aa3.73□□□□□ -1.81
SEMA3D-204ENST00000484038 KRTAP10-8P60410 259 aa3.73□□□□□ -1.81
SEMA3D-204ENST00000484038 UBE2G1P62253 170 aa3.73□□□□□ -1.81
SEMA3D-204ENST00000484038 RPL23P62829 140 aaKnown RBP3.73□□□□□ -1.81
SEMA3D-204ENST00000484038 TMEM241Q24JQ0 296 aa3.73□□□□□ -1.81
SEMA3D-204ENST00000484038 PRR27Q6MZM9 219 aa3.73□□□□□ -1.81
SEMA3D-204ENST00000484038 LINC00518Q8N0U6 118 aa3.73□□□□□ -1.81
SEMA3D-204ENST00000484038 OR10AG1Q8NH19 301 aa3.73□□□□□ -1.81
SEMA3D-204ENST00000484038 NAT8Q9UHE5 227 aa3.73□□□□□ -1.81
SEMA3D-204ENST00000484038 CBY1Q9Y3M2 126 aa3.73□□□□□ -1.81
SEMA3D-204ENST00000484038 TRAV8-4A0A0B4J246 113 aa3.72□□□□□ -1.81
SEMA3D-204ENST00000484038 IGHV1-24A0A0C4DH33 117 aa3.72□□□□□ -1.81
SEMA3D-204ENST00000484038 MUC21A0A140T8X8 626 aa3.72□□□□□ -1.81
SEMA3D-204ENST00000484038 C5orf52A6NGY3 159 aa3.72□□□□□ -1.81
SEMA3D-204ENST00000484038 PCP4L1A6NKN8 68 aa3.72□□□□□ -1.81
SEMA3D-204ENST00000484038 P01737 135 aa3.72□□□□□ -1.81
SEMA3D-204ENST00000484038 FABP9Q0Z7S8 132 aa3.72□□□□□ -1.81
SEMA3D-204ENST00000484038 PNRC1Q12796 327 aaPredicted RBP3.72□□□□□ -1.81
SEMA3D-204ENST00000484038 HIGD2BQ4VC39 106 aa3.72□□□□□ -1.81
SEMA3D-204ENST00000484038 SPANXN1Q5VSR9 72 aa3.72□□□□□ -1.81
SEMA3D-204ENST00000484038 SPINK6Q6UWN8 80 aa3.72□□□□□ -1.81
SEMA3D-204ENST00000484038 C20orf203Q8NBC4 194 aa3.72□□□□□ -1.81
SEMA3D-204ENST00000484038 ZFP30Q9Y2G7 519 aa3.72□□□□□ -1.81
SEMA3D-204ENST00000484038 IGLV4-60A0A075B6I1 120 aa3.71□□□□□ -1.82
SEMA3D-204ENST00000484038 HSBP1L1C9JCN9 74 aa3.71□□□□□ -1.82
SEMA3D-204ENST00000484038 TMEM250H0YL14 139 aa3.71□□□□□ -1.82
SEMA3D-204ENST00000484038 NDUFS6O75380 124 aaKnown RBP3.71□□□□□ -1.82
SEMA3D-204ENST00000484038 TRGC2P03986 189 aa3.71□□□□□ -1.82
SEMA3D-204ENST00000484038 SMIM17P0DL12 118 aa3.71□□□□□ -1.82
SEMA3D-204ENST00000484038 NDUFA6P56556 154 aa3.71□□□□□ -1.82
SEMA3D-204ENST00000484038 IQCJQ1A5X6 159 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms