RNA–Protein interactions for RNA: ENST00000483962.1

SNED1-210, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 2

Gene SNED1, Length 938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-210ENST00000483962 TMEM18Q96B42 140 aa12.92□□□□□ -0.34
SNED1-210ENST00000483962 C1orf43Q9BWL3 253 aa12.92□□□□□ -0.34
SNED1-210ENST00000483962 CDC42SE2Q9NRR3 84 aa12.92□□□□□ -0.34
SNED1-210ENST00000483962 COX11Q9Y6N1 276 aa12.92□□□□□ -0.34
SNED1-210ENST00000483962 TIMM21Q9BVV7 248 aa12.91□□□□□ -0.34
SNED1-210ENST00000483962 CSDC2Q9Y534 153 aaKnown RBP12.91□□□□□ -0.34
SNED1-210ENST00000483962 IGLV10-54A0A075B6I4 117 aa12.9□□□□□ -0.34
SNED1-210ENST00000483962 WFDC2Q14508 124 aa12.9□□□□□ -0.34
SNED1-210ENST00000483962 DGAT2L7PQ6IED9 249 aa12.9□□□□□ -0.34
SNED1-210ENST00000483962 ZNF664Q8N3J9 261 aa12.9□□□□□ -0.34
SNED1-210ENST00000483962 IGKV3OR2-268A0A0C4DH90 116 aa12.89□□□□□ -0.35
SNED1-210ENST00000483962 COLCA2A8K830 154 aa12.89□□□□□ -0.35
SNED1-210ENST00000483962 K7EMI3 77 aa12.89□□□□□ -0.35
SNED1-210ENST00000483962 SMAGPQ0VAQ4 97 aa12.89□□□□□ -0.35
SNED1-210ENST00000483962 PRSS3P2Q8NHM4 247 aa12.89□□□□□ -0.35
SNED1-210ENST00000483962 BAALCQ8WXS3 180 aa12.89□□□□□ -0.35
SNED1-210ENST00000483962 FAM104AQ969W3 186 aa12.89□□□□□ -0.35
SNED1-210ENST00000483962 TRAV8-4A0A0B4J246 113 aa12.88□□□□□ -0.35
SNED1-210ENST00000483962 ORMDL2Q53FV1 153 aa12.88□□□□□ -0.35
SNED1-210ENST00000483962 Q6ZUT4 128 aa12.88□□□□□ -0.35
SNED1-210ENST00000483962 PKHD1P08F94 4074 aa12.88□□□□□ -0.35
SNED1-210ENST00000483962 LINC01546A6NGU7 62 aa12.87□□□□□ -0.35
SNED1-210ENST00000483962 LECT2O14960 151 aa12.87□□□□□ -0.35
SNED1-210ENST00000483962 KRTAP10-2P60368 255 aa12.87□□□□□ -0.35
SNED1-210ENST00000483962 RNASE13Q5GAN3 156 aaKnown RBP12.87□□□□□ -0.35
SNED1-210ENST00000483962 C18orf32Q8TCD1 76 aa12.87□□□□□ -0.35
SNED1-210ENST00000483962 OPRPNQ99935 248 aaPredicted RBP12.87□□□□□ -0.35
SNED1-210ENST00000483962 SPANXA1Q9NS26 97 aa12.87□□□□□ -0.35
SNED1-210ENST00000483962 SPATA12Q7Z6I5 190 aa12.86□□□□□ -0.35
SNED1-210ENST00000483962 EREGO14944 169 aa12.85□□□□□ -0.35
SNED1-210ENST00000483962 C2orf66Q6UXQ4 117 aa12.85□□□□□ -0.35
SNED1-210ENST00000483962 CYSLTR1Q9Y271 337 aa12.85□□□□□ -0.35
SNED1-210ENST00000483962 LINC00959A0A1B0GUT2 108 aa12.84□□□□□ -0.35
SNED1-210ENST00000483962 FUSP35637 526 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNED1-210ENST00000483962 MRPS36P82909 103 aaKnown RBP12.84□□□□□ -0.35
SNED1-210ENST00000483962 URB1-AS1Q96HZ7 61 aa12.84□□□□□ -0.35
SNED1-210ENST00000483962 PYGO1Q9Y3Y4 419 aa12.84□□□□□ -0.35
SNED1-210ENST00000483962 TRGC2P03986 189 aa12.83□□□□□ -0.36
SNED1-210ENST00000483962 FA2HQ7L5A8 372 aa12.83□□□□□ -0.36
SNED1-210ENST00000483962 CHCHD10Q8WYQ3 142 aaPredicted RBP12.83□□□□□ -0.36
SNED1-210ENST00000483962 IGLV4-3A0A075B6K6 122 aa12.82□□□□□ -0.36
SNED1-210ENST00000483962 GAGE12HA6NDE8 117 aa12.82□□□□□ -0.36
SNED1-210ENST00000483962 ATP6V1G1O75348 118 aa12.82□□□□□ -0.36
SNED1-210ENST00000483962 Q8N814 137 aa12.82□□□□□ -0.36
SNED1-210ENST00000483962 TOMM6Q96B49 74 aa12.81□□□□□ -0.36
SNED1-210ENST00000483962 IGIPA6NJ69 53 aa12.8□□□□□ -0.36
SNED1-210ENST00000483962 CCL25O15444 150 aa12.8□□□□□ -0.36
SNED1-210ENST00000483962 LINC00614P0C842 121 aa12.8□□□□□ -0.36
SNED1-210ENST00000483962 SS18Q15532 418 aa12.8□□□□□ -0.36
SNED1-210ENST00000483962 TRAV13-1A0A0B4J241 112 aa12.79□□□□□ -0.36
SNED1-210ENST00000483962 USP17L23D6RBM5 183 aa12.79□□□□□ -0.36
SNED1-210ENST00000483962 S100A1P23297 94 aa12.79□□□□□ -0.36
SNED1-210ENST00000483962 G0S2P27469 103 aa12.79□□□□□ -0.36
SNED1-210ENST00000483962 XCL1P47992 114 aa12.79□□□□□ -0.36
SNED1-210ENST00000483962 FOXI1Q12951 378 aa12.79□□□□□ -0.36
SNED1-210ENST00000483962 AP5S1Q9NUS5 200 aa12.79□□□□□ -0.36
SNED1-210ENST00000483962 TMEM141Q96I45 108 aa12.78□□□□□ -0.36
SNED1-210ENST00000483962 PGPEP1Q9NXJ5 209 aa12.78□□□□□ -0.36
SNED1-210ENST00000483962 C1orf196B1AJZ1 125 aa12.77□□□□□ -0.37
SNED1-210ENST00000483962 A0A096LNJ9 63 aa12.76□□□□□ -0.37
SNED1-210ENST00000483962 ZC2HC1BQ5TFG8 222 aa12.76□□□□□ -0.37
SNED1-210ENST00000483962 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.75□□□□□ -0.37
SNED1-210ENST00000483962 IFITM10A6NMD0 228 aa12.75□□□□□ -0.37
SNED1-210ENST00000483962 C16orf90A8MZG2 172 aa12.75□□□□□ -0.37
SNED1-210ENST00000483962 NPSP0C0P6 89 aa12.75□□□□□ -0.37
SNED1-210ENST00000483962 RAB5BP61020 215 aa12.75□□□□□ -0.37
SNED1-210ENST00000483962 DYNC1H1Q14204 4646 aaKnown RBP12.75□□□□□ -0.37
SNED1-210ENST00000483962 CD164L2Q6UWJ8 174 aa12.75□□□□□ -0.37
SNED1-210ENST00000483962 LINC00173Q6ZV60 143 aa12.75□□□□□ -0.37
SNED1-210ENST00000483962 ERASQ7Z444 233 aa12.75□□□□□ -0.37
SNED1-210ENST00000483962 SCGB3A1Q96QR1 104 aa12.75□□□□□ -0.37
SNED1-210ENST00000483962 TIMM17AQ99595 171 aa12.75□□□□□ -0.37
SNED1-210ENST00000483962 DNAH5Q8TE73 4624 aa12.75□□□□□ -0.37
SNED1-210ENST00000483962 PRSS1P07477 247 aa12.74□□□□□ -0.37
SNED1-210ENST00000483962 PMCHL1Q16048 86 aa12.74□□□□□ -0.37
SNED1-210ENST00000483962 CDPF1Q6NVV7 123 aa12.74□□□□□ -0.37
SNED1-210ENST00000483962 NTN5Q8WTR8 489 aaPredicted RBP12.74□□□□□ -0.37
SNED1-210ENST00000483962 AMELXQ99217 191 aa12.74□□□□□ -0.37
SNED1-210ENST00000483962 BIRC6Q9NR09 4857 aa12.74□□□□□ -0.37
SNED1-210ENST00000483962 C14orf177Q52M58 125 aa12.73□□□□□ -0.37
SNED1-210ENST00000483962 TEX43Q6ZNM6 134 aa12.73□□□□□ -0.37
SNED1-210ENST00000483962 C15orf56Q8N910 161 aa12.73□□□□□ -0.37
SNED1-210ENST00000483962 IGLV5-52A0A0A0MRZ9 124 aa12.72□□□□□ -0.37
SNED1-210ENST00000483962 LINC01549A6NIU2 74 aa12.72□□□□□ -0.37
SNED1-210ENST00000483962 Q6ZN92 141 aa12.72□□□□□ -0.37
SNED1-210ENST00000483962 VCX2Q9H322 139 aa12.72□□□□□ -0.37
SNED1-210ENST00000483962 BAGE3Q86Y29 109 aa12.71□□□□□ -0.37
SNED1-210ENST00000483962 CHCHD1Q96BP2 118 aaKnown RBP12.71□□□□□ -0.37
SNED1-210ENST00000483962 HBDP02042 147 aa12.7□□□□□ -0.38
SNED1-210ENST00000483962 UBE2D1P51668 147 aa12.7□□□□□ -0.38
SNED1-210ENST00000483962 LINC00310P59036 64 aa12.69□□□□□ -0.38
SNED1-210ENST00000483962 COX6A2Q02221 97 aa12.69□□□□□ -0.38
SNED1-210ENST00000483962 PDZD11Q5EBL8 140 aa12.69□□□□□ -0.38
SNED1-210ENST00000483962 PAPPA-AS1Q5QFB9 102 aa12.69□□□□□ -0.38
SNED1-210ENST00000483962 LINC00242Q5T6M2 205 aa12.69□□□□□ -0.38
SNED1-210ENST00000483962 CFAP161Q6P656 301 aa12.69□□□□□ -0.38
SNED1-210ENST00000483962 C5orf38Q86SI9 138 aa12.69□□□□□ -0.38
SNED1-210ENST00000483962 C2orf88Q9BSF0 95 aa12.69□□□□□ -0.38
SNED1-210ENST00000483962 hDV102S1A0JD36 115 aa12.68□□□□□ -0.38
SNED1-210ENST00000483962 COX7A2LO14548 114 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms