RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 DAD1P61803 113 aa18.5■□□□□ 0.55
SHOX2-204ENST00000483851 C9orf118A6NHY6 69 aa18.48■□□□□ 0.55
SHOX2-204ENST00000483851 FXYD2P54710 66 aa18.48■□□□□ 0.55
SHOX2-204ENST00000483851 TAL2Q16559 108 aa18.48■□□□□ 0.55
SHOX2-204ENST00000483851 SMAGPQ0VAQ4 97 aa18.48■□□□□ 0.55
SHOX2-204ENST00000483851 AMMECR1LQ6DCA0 310 aa18.48■□□□□ 0.55
SHOX2-204ENST00000483851 MDFIQ99750 246 aa18.48■□□□□ 0.55
SHOX2-204ENST00000483851 UBE2D4Q9Y2X8 147 aa18.48■□□□□ 0.55
SHOX2-204ENST00000483851 PKD1L1Q8TDX9 2849 aa18.48■□□□□ 0.55
SHOX2-204ENST00000483851 IGLV4-3A0A075B6K6 122 aa18.47■□□□□ 0.55
SHOX2-204ENST00000483851 MYMXA0A1B0GTQ4 84 aa18.47■□□□□ 0.55
SHOX2-204ENST00000483851 DEFB4AO15263 64 aa18.47■□□□□ 0.55
SHOX2-204ENST00000483851 CMYA5Q8N3K9 4069 aa18.46■□□□□ 0.55
SHOX2-204ENST00000483851 CEND1Q8N111 149 aa18.46■□□□□ 0.55
SHOX2-204ENST00000483851 ATP5G1P05496 136 aa18.46■□□□□ 0.54
SHOX2-204ENST00000483851 GCSHP23434 173 aa18.46■□□□□ 0.54
SHOX2-204ENST00000483851 KPRPQ5T749 579 aaPredicted RBP18.46■□□□□ 0.54
SHOX2-204ENST00000483851 VCX2Q9H322 139 aa18.46■□□□□ 0.54
SHOX2-204ENST00000483851 K7EP13 123 aa18.45■□□□□ 0.54
SHOX2-204ENST00000483851 LOC100131303A0A0U1RQF7 123 aa18.44■□□□□ 0.54
SHOX2-204ENST00000483851 NTM-AS1Q6ZSK4 140 aa18.44■□□□□ 0.54
SHOX2-204ENST00000483851 AMELXQ99217 191 aa18.44■□□□□ 0.54
SHOX2-204ENST00000483851 NBEAL2Q6ZNJ1 2754 aa18.44■□□□□ 0.54
SHOX2-204ENST00000483851 H7C423 109 aa18.43■□□□□ 0.54
SHOX2-204ENST00000483851 MRPS36P82909 103 aaKnown RBP18.43■□□□□ 0.54
SHOX2-204ENST00000483851 CELA1Q9UNI1 258 aa18.43■□□□□ 0.54
SHOX2-204ENST00000483851 CSDC2Q9Y534 153 aaKnown RBP18.43■□□□□ 0.54
SHOX2-204ENST00000483851 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.43■□□□□ 0.54
SHOX2-204ENST00000483851 IGKV2-29A2NJV5 120 aaPredicted RBP18.43■□□□□ 0.54
SHOX2-204ENST00000483851 NFE4Q86UQ8 179 aa18.43■□□□□ 0.54
SHOX2-204ENST00000483851 SBSPONQ8IVN8 264 aa18.42■□□□□ 0.54
SHOX2-204ENST00000483851 C11orf68Q9H3H3 251 aaKnown RBP18.42■□□□□ 0.54
SHOX2-204ENST00000483851 OPRPNQ99935 248 aaPredicted RBP18.41■□□□□ 0.54
SHOX2-204ENST00000483851 ANK2Q01484 3957 aa18.41■□□□□ 0.54
SHOX2-204ENST00000483851 FAM104AQ969W3 186 aa18.41■□□□□ 0.54
SHOX2-204ENST00000483851 PAX4O43316 350 aa18.4■□□□□ 0.54
SHOX2-204ENST00000483851 SMIM13P0DJ93 91 aa18.4■□□□□ 0.54
SHOX2-204ENST00000483851 GYPEP15421 78 aa18.4■□□□□ 0.54
SHOX2-204ENST00000483851 TMEM243Q9BU79 118 aa18.4■□□□□ 0.54
SHOX2-204ENST00000483851 DGAT2L7PQ6IED9 249 aa18.38■□□□□ 0.53
SHOX2-204ENST00000483851 H3BUT2 72 aa18.37■□□□□ 0.53
SHOX2-204ENST00000483851 HERVK_113P61574 105 aa18.37■□□□□ 0.53
SHOX2-204ENST00000483851 ATP6V0E2Q8NHE4 81 aa18.37■□□□□ 0.53
SHOX2-204ENST00000483851 TRBV6-8A0A0A6YYG3 113 aa18.37■□□□□ 0.53
SHOX2-204ENST00000483851 DNAH3Q8TD57 4116 aa18.37■□□□□ 0.53
SHOX2-204ENST00000483851 CEMP1Q6PRD7 247 aaPredicted RBP18.36■□□□□ 0.53
SHOX2-204ENST00000483851 RAB37Q96AX2 223 aa18.36■□□□□ 0.53
SHOX2-204ENST00000483851 RETNQ9HD89 108 aa18.36■□□□□ 0.53
SHOX2-204ENST00000483851 ZNF815PA8K554 130 aa18.35■□□□□ 0.53
SHOX2-204ENST00000483851 UBE2L6O14933 153 aa18.35■□□□□ 0.53
SHOX2-204ENST00000483851 HIST1H4GQ99525 98 aa18.35■□□□□ 0.53
SHOX2-204ENST00000483851 VSIG2Q96IQ7 327 aa18.34■□□□□ 0.53
SHOX2-204ENST00000483851 TRAV26-1A0A087WT03 109 aa18.33■□□□□ 0.53
SHOX2-204ENST00000483851 A0A1W2PPM0 123 aa18.33■□□□□ 0.53
SHOX2-204ENST00000483851 PLEKHB2Q96CS7 222 aa18.33■□□□□ 0.53
SHOX2-204ENST00000483851 K7EIL1 84 aa18.33■□□□□ 0.52
SHOX2-204ENST00000483851 TSPEAR-AS2P59090 65 aa18.33■□□□□ 0.52
SHOX2-204ENST00000483851 TMEM170BQ5T4T1 132 aa18.33■□□□□ 0.52
SHOX2-204ENST00000483851 Q6ZUT4 128 aa18.33■□□□□ 0.52
SHOX2-204ENST00000483851 NAA38Q9BRA0 125 aaKnown RBP18.33■□□□□ 0.52
SHOX2-204ENST00000483851 A0A1B0GWB2 263 aa18.32■□□□□ 0.52
SHOX2-204ENST00000483851 F5H768 121 aa18.32■□□□□ 0.52
SHOX2-204ENST00000483851 K7ERJ3 54 aa18.32■□□□□ 0.52
SHOX2-204ENST00000483851 NHP2Q9NX24 153 aaKnown RBP18.32■□□□□ 0.52
SHOX2-204ENST00000483851 TMEM223A0PJW6 202 aa18.31■□□□□ 0.52
SHOX2-204ENST00000483851 GAGE10A6NGK3 116 aa18.31■□□□□ 0.52
SHOX2-204ENST00000483851 K7EP34 96 aa18.31■□□□□ 0.52
SHOX2-204ENST00000483851 C12orf74Q32Q52 190 aa18.31■□□□□ 0.52
SHOX2-204ENST00000483851 SH2D6Q7Z4S9 175 aa18.31■□□□□ 0.52
SHOX2-204ENST00000483851 SPATA25Q9BR10 227 aa18.31■□□□□ 0.52
SHOX2-204ENST00000483851 OR5A1Q8NGJ0 315 aa18.31■□□□□ 0.52
SHOX2-204ENST00000483851 TMEM101Q96IK0 257 aa18.31■□□□□ 0.52
SHOX2-204ENST00000483851 ZNF22P17026 224 aaPredicted RBP18.3■□□□□ 0.52
SHOX2-204ENST00000483851 TINCRA0A1B0GVN0 87 aa18.29■□□□□ 0.52
SHOX2-204ENST00000483851 GTF2H5Q6ZYL4 71 aa18.29■□□□□ 0.52
SHOX2-204ENST00000483851 TM2D3Q9BRN9 247 aa18.29■□□□□ 0.52
SHOX2-204ENST00000483851 CDC42SE2Q9NRR3 84 aa18.29■□□□□ 0.52
SHOX2-204ENST00000483851 A0A0J9YXV3 536 aa18.28■□□□□ 0.52
SHOX2-204ENST00000483851 A0A0J9YY99 117 aa18.28■□□□□ 0.52
SHOX2-204ENST00000483851 MRPL23Q16540 153 aaKnown RBP18.28■□□□□ 0.52
SHOX2-204ENST00000483851 H3BNG1 76 aa18.26■□□□□ 0.51
SHOX2-204ENST00000483851 UBE2D1P51668 147 aa18.26■□□□□ 0.51
SHOX2-204ENST00000483851 FAM19A3Q7Z5A8 133 aa18.26■□□□□ 0.51
SHOX2-204ENST00000483851 J3QQQ9 107 aa18.26■□□□□ 0.51
SHOX2-204ENST00000483851 LEPROTO15243 131 aa18.26■□□□□ 0.51
SHOX2-204ENST00000483851 SCGB1D4Q6XE38 83 aa18.25■□□□□ 0.51
SHOX2-204ENST00000483851 CHCHD5Q9BSY4 110 aa18.25■□□□□ 0.51
SHOX2-204ENST00000483851 NOTCH1P46531 2555 aa18.25■□□□□ 0.51
SHOX2-204ENST00000483851 PRB2P02812 416 aaPredicted RBP18.24■□□□□ 0.51
SHOX2-204ENST00000483851 TIRAPP58753 221 aa18.24■□□□□ 0.51
SHOX2-204ENST00000483851 RNASE13Q5GAN3 156 aaKnown RBP18.24■□□□□ 0.51
SHOX2-204ENST00000483851 SPANXB1Q9NS25 103 aaPredicted RBP18.24■□□□□ 0.51
SHOX2-204ENST00000483851 ICOSQ9Y6W8 199 aa18.24■□□□□ 0.51
SHOX2-204ENST00000483851 IGLL5B9A064 214 aa18.24■□□□□ 0.51
SHOX2-204ENST00000483851 FABP2P12104 132 aa18.24■□□□□ 0.51
SHOX2-204ENST00000483851 HTN3P15516 51 aa18.24■□□□□ 0.51
SHOX2-204ENST00000483851 DEFB121Q5J5C9 76 aa18.24■□□□□ 0.51
SHOX2-204ENST00000483851 A0A0J9YWU9 116 aa18.22■□□□□ 0.51
SHOX2-204ENST00000483851 SPCS1Q9Y6A9 102 aa18.22■□□□□ 0.51
SHOX2-204ENST00000483851 GAGE6Q13070 117 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms