RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 CHD9Q3L8U1 2897 aa0.24□□□□□ -2.37
NSMCE4A-210ENST00000483541 MYOM1P52179 1685 aa0.24□□□□□ -2.37
NSMCE4A-210ENST00000483541 LRP6O75581 1613 aa0.24□□□□□ -2.37
NSMCE4A-210ENST00000483541 WDR7Q9Y4E6 1490 aa0.24□□□□□ -2.37
NSMCE4A-210ENST00000483541 PKDREJQ9NTG1 2253 aa0.24□□□□□ -2.37
NSMCE4A-210ENST00000483541 ATP5EP56381 51 aaPredicted RBP0.24□□□□□ -2.37
NSMCE4A-210ENST00000483541 TMEM170BQ5T4T1 132 aa0.24□□□□□ -2.37
NSMCE4A-210ENST00000483541 BAGE2Q86Y30 109 aa0.24□□□□□ -2.37
NSMCE4A-210ENST00000483541 TSLPQ969D9 159 aa0.24□□□□□ -2.37
NSMCE4A-210ENST00000483541 AMELXQ99217 191 aa0.24□□□□□ -2.37
NSMCE4A-210ENST00000483541 SPCS1Q9Y6A9 102 aa0.24□□□□□ -2.37
NSMCE4A-210ENST00000483541 SPTBN1Q01082 2364 aaKnown RBP0.24□□□□□ -2.37
NSMCE4A-210ENST00000483541 TET3O43151 1660 aa0.24□□□□□ -2.37
NSMCE4A-210ENST00000483541 ERCC6L2Q5T890 1561 aa0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 NRKQ7Z2Y5 1582 aa0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 OTOGQ6ZRI0 2925 aa0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 TRAV22A0A0B4J277 110 aa0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 UBE2L5PA0A1B0GUS4 154 aa0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 LOC285095A0A1B0GVY8 99 aa0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 OOSP1A8MZH6 123 aa0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 F8VRH5 84 aa0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 UQCR11O14957 56 aa0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 IFITM1P13164 125 aa0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 GNG4P50150 75 aa0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 UBE2L3P68036 154 aaKnown RBP0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 FAT4Q6V0I7 4981 aa0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 MYO7BQ6PIF6 2116 aa0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 ABCA2Q9BZC7 2435 aa0.23□□□□□ -2.37
NSMCE4A-210ENST00000483541 WNK2Q9Y3S1 2297 aa0.22□□□□□ -2.37
NSMCE4A-210ENST00000483541 KMT2DO14686 5537 aa0.22□□□□□ -2.37
NSMCE4A-210ENST00000483541 PTPN13Q12923 2485 aa0.22□□□□□ -2.37
NSMCE4A-210ENST00000483541 KDM5AP29375 1690 aaKnown RBP0.22□□□□□ -2.37
NSMCE4A-210ENST00000483541 FAM24AA6NFZ4 105 aa0.22□□□□□ -2.37
NSMCE4A-210ENST00000483541 HMGN4O00479 90 aa0.22□□□□□ -2.37
NSMCE4A-210ENST00000483541 CFDP00746 253 aaPredicted RBP0.22□□□□□ -2.37
NSMCE4A-210ENST00000483541 TMEM203Q969S6 136 aa0.22□□□□□ -2.37
NSMCE4A-210ENST00000483541 NHSL1Q5SYE7 1610 aa0.22□□□□□ -2.37
NSMCE4A-210ENST00000483541 SYNE1Q8NF91 8797 aaKnown RBP0.22□□□□□ -2.37
NSMCE4A-210ENST00000483541 FAM135AQ9P2D6 1515 aa0.22□□□□□ -2.37
NSMCE4A-210ENST00000483541 GOLGA4Q13439 2230 aaKnown RBP0.21□□□□□ -2.38
NSMCE4A-210ENST00000483541 IGLC7A0M8Q6 106 aa0.21□□□□□ -2.38
NSMCE4A-210ENST00000483541 F6UZH7 168 aa0.21□□□□□ -2.38
NSMCE4A-210ENST00000483541 M0R3E3 92 aa0.21□□□□□ -2.38
NSMCE4A-210ENST00000483541 PPP3R1P63098 170 aa0.21□□□□□ -2.38
NSMCE4A-210ENST00000483541 SVBPQ8N300 66 aa0.21□□□□□ -2.38
NSMCE4A-210ENST00000483541 UQCR10Q9UDW1 63 aa0.21□□□□□ -2.38
NSMCE4A-210ENST00000483541 GNG8Q9UK08 70 aa0.21□□□□□ -2.38
NSMCE4A-210ENST00000483541 U3KQA8 63 aa0.21□□□□□ -2.38
NSMCE4A-210ENST00000483541 BTAF1O14981 1849 aa0.21□□□□□ -2.38
NSMCE4A-210ENST00000483541 ANK2Q01484 3957 aa0.2□□□□□ -2.38
NSMCE4A-210ENST00000483541 MAPKBP1O60336 1514 aa0.2□□□□□ -2.38
NSMCE4A-210ENST00000483541 CORTO00230 105 aa0.2□□□□□ -2.38
NSMCE4A-210ENST00000483541 S100A1P23297 94 aa0.2□□□□□ -2.38
NSMCE4A-210ENST00000483541 MRPS10P82664 201 aaKnown RBP0.2□□□□□ -2.38
NSMCE4A-210ENST00000483541 Q6JHZ5 121 aa0.2□□□□□ -2.38
NSMCE4A-210ENST00000483541 C2orf88Q9BSF0 95 aa0.2□□□□□ -2.38
NSMCE4A-210ENST00000483541 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
NSMCE4A-210ENST00000483541 C10orf71Q711Q0 1435 aa0.2□□□□□ -2.38
NSMCE4A-210ENST00000483541 RAPGEF6Q8TEU7 1601 aa0.2□□□□□ -2.38
NSMCE4A-210ENST00000483541 USF3Q68DE3 2245 aa0.19□□□□□ -2.38
NSMCE4A-210ENST00000483541 ARHGEF5Q12774 1597 aa0.19□□□□□ -2.38
NSMCE4A-210ENST00000483541 CHKB-CPT1BH3BT56 60 aa0.19□□□□□ -2.38
NSMCE4A-210ENST00000483541 LINC00474Q9P2X8 69 aa0.19□□□□□ -2.38
NSMCE4A-210ENST00000483541 IER3IP1Q9Y5U9 82 aa0.19□□□□□ -2.38
NSMCE4A-210ENST00000483541 LINC01558Q9Y6Z2 57 aa0.19□□□□□ -2.38
NSMCE4A-210ENST00000483541 LAMC1P11047 1609 aa0.18□□□□□ -2.38
NSMCE4A-210ENST00000483541 TOP2BQ02880 1626 aa0.18□□□□□ -2.38
NSMCE4A-210ENST00000483541 BCE1O60756 84 aa0.18□□□□□ -2.38
NSMCE4A-210ENST00000483541 SFT2D2O95562 160 aa0.18□□□□□ -2.38
NSMCE4A-210ENST00000483541 GNG11P61952 73 aa0.18□□□□□ -2.38
NSMCE4A-210ENST00000483541 Q8IZM0 81 aa0.18□□□□□ -2.38
NSMCE4A-210ENST00000483541 FAIMQ9NVQ4 179 aa0.18□□□□□ -2.38
NSMCE4A-210ENST00000483541 SCAPERQ9BY12 1400 aa0.18□□□□□ -2.38
NSMCE4A-210ENST00000483541 GVINP1Q7Z2Y8 2422 aa0.18□□□□□ -2.38
NSMCE4A-210ENST00000483541 PZPP20742 1482 aa0.17□□□□□ -2.38
NSMCE4A-210ENST00000483541 SHANK2Q9UPX8 1470 aa0.17□□□□□ -2.38
NSMCE4A-210ENST00000483541 CC2D2AQ9P2K1 1620 aa0.17□□□□□ -2.38
NSMCE4A-210ENST00000483541 LINC00587B1AMM8 73 aa0.17□□□□□ -2.38
NSMCE4A-210ENST00000483541 MGPP08493 103 aa0.17□□□□□ -2.38
NSMCE4A-210ENST00000483541 DCDP81605 110 aaKnown RBP0.17□□□□□ -2.38
NSMCE4A-210ENST00000483541 WFDC2Q14508 124 aa0.17□□□□□ -2.38
NSMCE4A-210ENST00000483541 PEG3Q9GZU2 1588 aa0.17□□□□□ -2.38
NSMCE4A-210ENST00000483541 DPH3P1Q9H4G8 78 aa0.17□□□□□ -2.38
NSMCE4A-210ENST00000483541 TP53AIP1Q9HCN2 124 aa0.17□□□□□ -2.38
NSMCE4A-210ENST00000483541 FSIP2Q5CZC0 6907 aa0.17□□□□□ -2.38
NSMCE4A-210ENST00000483541 SYNE2Q8WXH0 6885 aaKnown RBP0.17□□□□□ -2.38
NSMCE4A-210ENST00000483541 SPHKAPQ2M3C7 1700 aa0.16□□□□□ -2.38
NSMCE4A-210ENST00000483541 GTF2H5Q6ZYL4 71 aa0.16□□□□□ -2.38
NSMCE4A-210ENST00000483541 LINC00472Q9H8W2 130 aa0.16□□□□□ -2.38
NSMCE4A-210ENST00000483541 SCN7AQ01118 1682 aa0.16□□□□□ -2.38
NSMCE4A-210ENST00000483541 PPRC1Q5VV67 1664 aaKnown RBP0.16□□□□□ -2.38
NSMCE4A-210ENST00000483541 ARHGAP5Q13017 1502 aa0.16□□□□□ -2.38
NSMCE4A-210ENST00000483541 EHBP1L1Q8N3D4 1523 aa0.16□□□□□ -2.38
NSMCE4A-210ENST00000483541 ARHGEF12Q9NZN5 1544 aa0.16□□□□□ -2.38
NSMCE4A-210ENST00000483541 PAPPAQ13219 1627 aa0.16□□□□□ -2.38
NSMCE4A-210ENST00000483541 DIP2CQ9Y2E4 1556 aa0.15□□□□□ -2.38
NSMCE4A-210ENST00000483541 TOPAZ1Q8N9V7 1692 aa0.15□□□□□ -2.39
NSMCE4A-210ENST00000483541 FXYD6-FXYD2A0A087WZ82 144 aa0.15□□□□□ -2.39
NSMCE4A-210ENST00000483541 NAP1L6A6NFF2 107 aa0.15□□□□□ -2.39
NSMCE4A-210ENST00000483541 WHAMMP3Q1A5X7 153 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms