RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 TMEM238LA0A1B0GVL6 79 aa6.97□□□□□ -1.29
LIMK1-205ENST00000483414 A6NJY4 79 aa6.97□□□□□ -1.29
LIMK1-205ENST00000483414 IGHV4-30-4P0DP06 118 aa6.96□□□□□ -1.29
LIMK1-205ENST00000483414 CMC4P56277 68 aaPredicted RBP6.96□□□□□ -1.29
LIMK1-205ENST00000483414 PMVKQ15126 192 aa6.96□□□□□ -1.29
LIMK1-205ENST00000483414 CARD19Q96LW7 228 aa6.96□□□□□ -1.29
LIMK1-205ENST00000483414 TRAV12-1A0A0B4J245 112 aa6.96□□□□□ -1.3
LIMK1-205ENST00000483414 SPXQ9BT56 116 aa6.96□□□□□ -1.3
LIMK1-205ENST00000483414 VCX2Q9H322 139 aa6.95□□□□□ -1.3
LIMK1-205ENST00000483414 STARD9Q9P2P6 4700 aa6.95□□□□□ -1.3
LIMK1-205ENST00000483414 P0DMU3 169 aa6.95□□□□□ -1.3
LIMK1-205ENST00000483414 FAM231AP0DMU4 169 aa6.95□□□□□ -1.3
LIMK1-205ENST00000483414 FAM231CP0DMU5 169 aa6.95□□□□□ -1.3
LIMK1-205ENST00000483414 SMIM20Q8N5G0 67 aa6.95□□□□□ -1.3
LIMK1-205ENST00000483414 IGHV1OR15-1A0A075B7D0 117 aa6.95□□□□□ -1.3
LIMK1-205ENST00000483414 NPC2P61916 151 aa6.95□□□□□ -1.3
LIMK1-205ENST00000483414 LINC01546A6NGU7 62 aa6.94□□□□□ -1.3
LIMK1-205ENST00000483414 CCDC179H3BU77 68 aa6.94□□□□□ -1.3
LIMK1-205ENST00000483414 TAL2Q16559 108 aa6.94□□□□□ -1.3
LIMK1-205ENST00000483414 CEMP1Q6PRD7 247 aaPredicted RBP6.94□□□□□ -1.3
LIMK1-205ENST00000483414 C1QTNF4Q9BXJ3 329 aa6.94□□□□□ -1.3
LIMK1-205ENST00000483414 IGHV3-16A0A0C4DH30 117 aa6.94□□□□□ -1.3
LIMK1-205ENST00000483414 HERV-K104P63124 156 aa6.94□□□□□ -1.3
LIMK1-205ENST00000483414 NBEAL2Q6ZNJ1 2754 aa6.93□□□□□ -1.3
LIMK1-205ENST00000483414 IGHV3-38A0A0C4DH36 116 aa6.93□□□□□ -1.3
LIMK1-205ENST00000483414 TSPAN13O95857 204 aa6.93□□□□□ -1.3
LIMK1-205ENST00000483414 LINC00467Q9BRT7 94 aa6.93□□□□□ -1.3
LIMK1-205ENST00000483414 TNFRSF18Q9Y5U5 241 aa6.93□□□□□ -1.3
LIMK1-205ENST00000483414 DNAH1Q9P2D7 4330 aa6.93□□□□□ -1.3
LIMK1-205ENST00000483414 TRBV7-3A0A075B6L6 115 aa6.93□□□□□ -1.3
LIMK1-205ENST00000483414 A0A0J9YXV3 536 aa6.93□□□□□ -1.3
LIMK1-205ENST00000483414 TCL1BO95988 128 aa6.93□□□□□ -1.3
LIMK1-205ENST00000483414 PRB2P02812 416 aaPredicted RBP6.93□□□□□ -1.3
LIMK1-205ENST00000483414 SCGB1A1P11684 91 aa6.93□□□□□ -1.3
LIMK1-205ENST00000483414 C1orf158Q8N1D5 194 aa6.93□□□□□ -1.3
LIMK1-205ENST00000483414 J3QQQ9 107 aa6.92□□□□□ -1.3
LIMK1-205ENST00000483414 PAPPA-AS1Q5QFB9 102 aa6.92□□□□□ -1.3
LIMK1-205ENST00000483414 CFAP126Q5VTH2 177 aa6.92□□□□□ -1.3
LIMK1-205ENST00000483414 ANKRD29Q8N6D5 301 aa6.92□□□□□ -1.3
LIMK1-205ENST00000483414 KIR2DL5BQ8NHK3 375 aa6.92□□□□□ -1.3
LIMK1-205ENST00000483414 IL17DQ8TAD2 202 aa6.92□□□□□ -1.3
LIMK1-205ENST00000483414 LINC01587Q99440 93 aa6.92□□□□□ -1.3
LIMK1-205ENST00000483414 A0A0U1RRA0 63 aa6.92□□□□□ -1.3
LIMK1-205ENST00000483414 CRYGDP07320 174 aa6.92□□□□□ -1.3
LIMK1-205ENST00000483414 PLAC8L1A1L4L8 177 aa6.92□□□□□ -1.3
LIMK1-205ENST00000483414 TSHBP01222 138 aa6.92□□□□□ -1.3
LIMK1-205ENST00000483414 DGAT2L7PQ6IED9 249 aa6.92□□□□□ -1.3
LIMK1-205ENST00000483414 TRAV4A0A0B4J268 109 aa6.91□□□□□ -1.3
LIMK1-205ENST00000483414 POLR2KP53803 58 aaKnown RBP6.91□□□□□ -1.3
LIMK1-205ENST00000483414 ZNRF2Q8NHG8 242 aa6.91□□□□□ -1.3
LIMK1-205ENST00000483414 LINC00315P59091 139 aa6.91□□□□□ -1.3
LIMK1-205ENST00000483414 PLECQ15149 4684 aaKnown RBP6.91□□□□□ -1.3
LIMK1-205ENST00000483414 STHQ8IWL8 128 aa6.91□□□□□ -1.3
LIMK1-205ENST00000483414 TMEM141Q96I45 108 aa6.91□□□□□ -1.3
LIMK1-205ENST00000483414 KIF25-AS1Q9Y6Z4 181 aa6.91□□□□□ -1.3
LIMK1-205ENST00000483414 X6R8D5 127 aa6.91□□□□□ -1.3
LIMK1-205ENST00000483414 IGIPA6NJ69 53 aa6.9□□□□□ -1.3
LIMK1-205ENST00000483414 MED14OSP0DP75 135 aa6.9□□□□□ -1.3
LIMK1-205ENST00000483414 TSPEAR-AS2P59090 65 aa6.9□□□□□ -1.3
LIMK1-205ENST00000483414 TM2D3Q9BRN9 247 aa6.9□□□□□ -1.3
LIMK1-205ENST00000483414 C9JAW5 83 aa6.9□□□□□ -1.31
LIMK1-205ENST00000483414 I3L3M4 83 aa6.9□□□□□ -1.31
LIMK1-205ENST00000483414 M0QY20 66 aa6.9□□□□□ -1.31
LIMK1-205ENST00000483414 ERG28Q9UKR5 140 aa6.9□□□□□ -1.31
LIMK1-205ENST00000483414 IGLV4-69A0A075B6H9 119 aa6.89□□□□□ -1.31
LIMK1-205ENST00000483414 A0A0J9YY99 117 aa6.89□□□□□ -1.31
LIMK1-205ENST00000483414 SBSPONQ8IVN8 264 aa6.89□□□□□ -1.31
LIMK1-205ENST00000483414 C11orf72Q8NBR9 251 aa6.89□□□□□ -1.31
LIMK1-205ENST00000483414 TRGV11A0A075B6L2 103 aa6.89□□□□□ -1.31
LIMK1-205ENST00000483414 TRAV8-3A0A0A6YYJ7 113 aa6.89□□□□□ -1.31
LIMK1-205ENST00000483414 A4D1N5 150 aa6.89□□□□□ -1.31
LIMK1-205ENST00000483414 IGHV3-53P01767 116 aa6.89□□□□□ -1.31
LIMK1-205ENST00000483414 RPL35AP18077 110 aaKnown RBP6.89□□□□□ -1.31
LIMK1-205ENST00000483414 XCL2Q9UBD3 114 aa6.89□□□□□ -1.31
LIMK1-205ENST00000483414 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.88□□□□□ -1.31
LIMK1-205ENST00000483414 IGKV2-29A2NJV5 120 aaPredicted RBP6.88□□□□□ -1.31
LIMK1-205ENST00000483414 NHLRC4P0CG21 123 aaPredicted RBP6.88□□□□□ -1.31
LIMK1-205ENST00000483414 TTC32Q5I0X7 151 aa6.88□□□□□ -1.31
LIMK1-205ENST00000483414 LYRM7Q5U5X0 104 aa6.88□□□□□ -1.31
LIMK1-205ENST00000483414 ZNF625Q96I27 306 aaPredicted RBP6.88□□□□□ -1.31
LIMK1-205ENST00000483414 OVOL2Q9BRP0 275 aa6.88□□□□□ -1.31
LIMK1-205ENST00000483414 Q9UF83 564 aa6.88□□□□□ -1.31
LIMK1-205ENST00000483414 ZFAND6Q6FIF0 208 aa6.88□□□□□ -1.31
LIMK1-205ENST00000483414 TIMM17AQ99595 171 aa6.88□□□□□ -1.31
LIMK1-205ENST00000483414 PRO1854Q9UHT4 67 aa6.88□□□□□ -1.31
LIMK1-205ENST00000483414 TRBV27A0A0K0K1C4 114 aa6.87□□□□□ -1.31
LIMK1-205ENST00000483414 MUSTN1Q8IVN3 82 aa6.87□□□□□ -1.31
LIMK1-205ENST00000483414 TEX49A0A1B0GTD5 131 aa6.87□□□□□ -1.31
LIMK1-205ENST00000483414 CFC1BP0CG36 223 aa6.87□□□□□ -1.31
LIMK1-205ENST00000483414 CFC1P0CG37 223 aa6.87□□□□□ -1.31
LIMK1-205ENST00000483414 C20orf203Q8NBC4 194 aa6.87□□□□□ -1.31
LIMK1-205ENST00000483414 NTN5Q8WTR8 489 aaPredicted RBP6.87□□□□□ -1.31
LIMK1-205ENST00000483414 Q8NAQ8 132 aa6.86□□□□□ -1.31
LIMK1-205ENST00000483414 TIMM21Q9BVV7 248 aa6.86□□□□□ -1.31
LIMK1-205ENST00000483414 IGKV3OR2-268A0A0C4DH90 116 aa6.86□□□□□ -1.31
LIMK1-205ENST00000483414 A8MWV9 139 aa6.86□□□□□ -1.31
LIMK1-205ENST00000483414 INSP01308 110 aa6.86□□□□□ -1.31
LIMK1-205ENST00000483414 APOC4P55056 127 aa6.86□□□□□ -1.31
LIMK1-205ENST00000483414 GAGE5Q13069 117 aa6.86□□□□□ -1.31
LIMK1-205ENST00000483414 GAGE6Q13070 117 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms