RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 OXTP01178 125 aa8.58□□□□□ -1.04
VTI1A-205ENST00000483122 Q9H8V8 135 aa8.58□□□□□ -1.04
VTI1A-205ENST00000483122 Q9HAA7 133 aa8.58□□□□□ -1.04
VTI1A-205ENST00000483122 ANKHD1Q8IWZ3 2542 aaKnown RBP8.58□□□□□ -1.04
VTI1A-205ENST00000483122 UBR5O95071 2799 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-205ENST00000483122 HRNRQ86YZ3 2850 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-205ENST00000483122 COX6A2Q02221 97 aa8.57□□□□□ -1.04
VTI1A-205ENST00000483122 CIRBPQ14011 172 aaKnown RBP8.57□□□□□ -1.04
VTI1A-205ENST00000483122 DPH3Q96FX2 82 aa8.57□□□□□ -1.04
VTI1A-205ENST00000483122 MOB4Q9Y3A3 225 aa8.57□□□□□ -1.04
VTI1A-205ENST00000483122 IGKV3D-7A0A0C4DH55 119 aa8.56□□□□□ -1.04
VTI1A-205ENST00000483122 C11orf71Q6IPW1 123 aa8.56□□□□□ -1.04
VTI1A-205ENST00000483122 LINC00467Q9BRT7 94 aa8.56□□□□□ -1.04
VTI1A-205ENST00000483122 KNCNA6PVL3 124 aa8.56□□□□□ -1.04
VTI1A-205ENST00000483122 RPL18AQ02543 176 aaKnown RBP8.56□□□□□ -1.04
VTI1A-205ENST00000483122 SPTBN1Q01082 2364 aaKnown RBP8.56□□□□□ -1.04
VTI1A-205ENST00000483122 INAFM2P0DMQ5 153 aa8.55□□□□□ -1.04
VTI1A-205ENST00000483122 PF4V1P10720 104 aa8.55□□□□□ -1.04
VTI1A-205ENST00000483122 HOXD3P31249 432 aaPredicted RBP8.55□□□□□ -1.04
VTI1A-205ENST00000483122 Q6ZSN1 163 aa8.55□□□□□ -1.04
VTI1A-205ENST00000483122 IGHV3-38A0A0C4DH36 116 aa8.55□□□□□ -1.04
VTI1A-205ENST00000483122 WIPF1O43516 503 aa8.55□□□□□ -1.04
VTI1A-205ENST00000483122 MALP21145 153 aa8.55□□□□□ -1.04
VTI1A-205ENST00000483122 C9orf129Q5T035 196 aaKnown RBP8.55□□□□□ -1.04
VTI1A-205ENST00000483122 FAM222AQ5U5X8 452 aa8.55□□□□□ -1.04
VTI1A-205ENST00000483122 DSCR8Q96T75 97 aa8.55□□□□□ -1.04
VTI1A-205ENST00000483122 UPK3BQ9BT76 320 aa8.55□□□□□ -1.04
VTI1A-205ENST00000483122 A0A087WVE0 104 aa8.54□□□□□ -1.04
VTI1A-205ENST00000483122 TRAV25A0A0B4J276 109 aa8.54□□□□□ -1.04
VTI1A-205ENST00000483122 HTN1P15515 57 aa8.54□□□□□ -1.04
VTI1A-205ENST00000483122 C4orf26Q17RF5 130 aa8.54□□□□□ -1.04
VTI1A-205ENST00000483122 PRIMA1Q86XR5 153 aa8.54□□□□□ -1.04
VTI1A-205ENST00000483122 DOPEY2Q9Y3R5 2298 aa8.53□□□□□ -1.04
VTI1A-205ENST00000483122 IGLV5-45A0A087WSX0 123 aa8.53□□□□□ -1.04
VTI1A-205ENST00000483122 PRM2P04554 102 aa8.53□□□□□ -1.04
VTI1A-205ENST00000483122 USMG5Q96IX5 58 aa8.53□□□□□ -1.04
VTI1A-205ENST00000483122 TMEM258P61165 79 aa8.53□□□□□ -1.04
VTI1A-205ENST00000483122 RBMY1A1P0DJD3 496 aaKnown RBP8.52□□□□□ -1.05
VTI1A-205ENST00000483122 RBMY1CP0DJD4 496 aa8.52□□□□□ -1.05
VTI1A-205ENST00000483122 RBMY1FQ15415 496 aaKnown RBP8.52□□□□□ -1.05
VTI1A-205ENST00000483122 LY6EQ16553 131 aa8.52□□□□□ -1.05
VTI1A-205ENST00000483122 PIK3CD-AS1Q5SR53 167 aa8.52□□□□□ -1.05
VTI1A-205ENST00000483122 C14orf132Q9NPU4 83 aa8.52□□□□□ -1.05
VTI1A-205ENST00000483122 MYO18BQ8IUG5 2567 aa8.52□□□□□ -1.05
VTI1A-205ENST00000483122 SORL1Q92673 2214 aa8.52□□□□□ -1.05
VTI1A-205ENST00000483122 IGLV5-39A0A0G2JS06 123 aa8.52□□□□□ -1.05
VTI1A-205ENST00000483122 SERP2Q8N6R1 65 aa8.52□□□□□ -1.05
VTI1A-205ENST00000483122 C19orf84I3L1E1 186 aa8.51□□□□□ -1.05
VTI1A-205ENST00000483122 DOPEY1Q5JWR5 2465 aa8.51□□□□□ -1.05
VTI1A-205ENST00000483122 IGHV3OR16-12A0A075B7B8 117 aa8.51□□□□□ -1.05
VTI1A-205ENST00000483122 DNAL4O96015 105 aa8.51□□□□□ -1.05
VTI1A-205ENST00000483122 BRD3OSQ6XYD6 125 aa8.51□□□□□ -1.05
VTI1A-205ENST00000483122 LINC01561Q8N1V8 128 aa8.51□□□□□ -1.05
VTI1A-205ENST00000483122 RNF152Q8N8N0 203 aa8.51□□□□□ -1.05
VTI1A-205ENST00000483122 LINC00846Q9NV44 126 aa8.51□□□□□ -1.05
VTI1A-205ENST00000483122 FLNCQ14315 2725 aa8.5□□□□□ -1.05
VTI1A-205ENST00000483122 HRCT1Q6UXD1 115 aa8.5□□□□□ -1.05
VTI1A-205ENST00000483122 LINC00242Q5T6M2 205 aa8.5□□□□□ -1.05
VTI1A-205ENST00000483122 Q5XG85 94 aa8.5□□□□□ -1.05
VTI1A-205ENST00000483122 Q6JHZ5 121 aa8.5□□□□□ -1.05
VTI1A-205ENST00000483122 A0A087WYN8 130 aa8.49□□□□□ -1.05
VTI1A-205ENST00000483122 SMIM1B2RUZ4 78 aa8.49□□□□□ -1.05
VTI1A-205ENST00000483122 BLCAPP62952 87 aa8.49□□□□□ -1.05
VTI1A-205ENST00000483122 HIST2H2BCQ6DN03 193 aa8.49□□□□□ -1.05
VTI1A-205ENST00000483122 HIST2H2BDQ6DRA6 164 aa8.49□□□□□ -1.05
VTI1A-205ENST00000483122 CELSR1Q9NYQ6 3014 aa8.49□□□□□ -1.05
VTI1A-205ENST00000483122 USP9XQ93008 2570 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-205ENST00000483122 K7EMT4 169 aa8.49□□□□□ -1.05
VTI1A-205ENST00000483122 SYNJ2BPP57105 145 aa8.49□□□□□ -1.05
VTI1A-205ENST00000483122 USP17L23D6RBM5 183 aa8.48□□□□□ -1.05
VTI1A-205ENST00000483122 H3BUA1 57 aa8.48□□□□□ -1.05
VTI1A-205ENST00000483122 LMO4P61968 165 aa8.48□□□□□ -1.05
VTI1A-205ENST00000483122 SNRPD3P62318 126 aaKnown RBP8.48□□□□□ -1.05
VTI1A-205ENST00000483122 DGAT2L7PQ6IED9 249 aa8.48□□□□□ -1.05
VTI1A-205ENST00000483122 COPS9Q8WXC6 57 aa8.48□□□□□ -1.05
VTI1A-205ENST00000483122 A0A1W2PPR1 153 aa8.48□□□□□ -1.05
VTI1A-205ENST00000483122 K7EQG2 157 aa8.48□□□□□ -1.05
VTI1A-205ENST00000483122 RPL28P46779 137 aaKnown RBP8.48□□□□□ -1.05
VTI1A-205ENST00000483122 PIMREGQ9BSJ6 248 aa8.48□□□□□ -1.05
VTI1A-205ENST00000483122 LINC00337Q8N6G1 96 aa8.47□□□□□ -1.05
VTI1A-205ENST00000483122 TENM4Q6N022 2769 aa8.47□□□□□ -1.05
VTI1A-205ENST00000483122 F5H768 121 aa8.46□□□□□ -1.05
VTI1A-205ENST00000483122 ZNF415Q09FC8 603 aa8.46□□□□□ -1.05
VTI1A-205ENST00000483122 BPESC1Q9GZL8 116 aa8.46□□□□□ -1.05
VTI1A-205ENST00000483122 IGLV1-40P01703 118 aa8.45□□□□□ -1.06
VTI1A-205ENST00000483122 FHL2Q14192 279 aa8.45□□□□□ -1.06
VTI1A-205ENST00000483122 IGKV2-28A0A075B6P5 120 aa8.45□□□□□ -1.06
VTI1A-205ENST00000483122 NCR3O14931 201 aa8.45□□□□□ -1.06
VTI1A-205ENST00000483122 IGKV2D-28P01615 120 aa8.45□□□□□ -1.06
VTI1A-205ENST00000483122 CRPP02741 224 aa8.45□□□□□ -1.06
VTI1A-205ENST00000483122 TRAV13-2A0A0B4J235 113 aa8.44□□□□□ -1.06
VTI1A-205ENST00000483122 HILS1P60008 231 aa8.44□□□□□ -1.06
VTI1A-205ENST00000483122 C10orf105Q8TEF2 133 aa8.44□□□□□ -1.06
VTI1A-205ENST00000483122 OBSCN-AS1Q96MR7 158 aa8.44□□□□□ -1.06
VTI1A-205ENST00000483122 HELZ2Q9BYK8 2649 aaKnown RBP8.44□□□□□ -1.06
VTI1A-205ENST00000483122 SPTAN1Q13813 2472 aaKnown RBP8.44□□□□□ -1.06
VTI1A-205ENST00000483122 H3BUX3 64 aa8.44□□□□□ -1.06
VTI1A-205ENST00000483122 SMIM11BQ8TCY0 68 aa8.44□□□□□ -1.06
VTI1A-205ENST00000483122 AKAP6Q13023 2319 aa8.43□□□□□ -1.06
VTI1A-205ENST00000483122 LRRK2Q5S007 2527 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms