RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 HIST1H2BLQ99880 126 aa8.48□□□□□ -1.05
COL21A1-209ENST00000482933 F5H697 171 aa8.47□□□□□ -1.05
COL21A1-209ENST00000482933 SMIM17P0DL12 118 aa8.47□□□□□ -1.05
COL21A1-209ENST00000482933 SMIM15Q7Z3B0 74 aa8.47□□□□□ -1.05
COL21A1-209ENST00000482933 GATD1Q8NB37 220 aa8.47□□□□□ -1.05
COL21A1-209ENST00000482933 PGLYRP4Q96LB8 373 aa8.47□□□□□ -1.05
COL21A1-209ENST00000482933 NIT2Q9NQR4 276 aa8.47□□□□□ -1.05
COL21A1-209ENST00000482933 KLK12Q9UKR0 248 aa8.47□□□□□ -1.05
COL21A1-209ENST00000482933 TMEM262E9PQX1 116 aa8.46□□□□□ -1.05
COL21A1-209ENST00000482933 PMCHP20382 165 aa8.46□□□□□ -1.05
COL21A1-209ENST00000482933 CAMPP49913 170 aa8.46□□□□□ -1.05
COL21A1-209ENST00000482933 TMEM97Q5BJF2 176 aa8.46□□□□□ -1.05
COL21A1-209ENST00000482933 NEXN-AS1Q8NBZ9 246 aa8.46□□□□□ -1.05
COL21A1-209ENST00000482933 IGKV2D-24A0A075B6R9 120 aa8.46□□□□□ -1.06
COL21A1-209ENST00000482933 TRBV6-8A0A0A6YYG3 113 aa8.46□□□□□ -1.06
COL21A1-209ENST00000482933 MUC21A0A0G2JKD1 596 aa8.46□□□□□ -1.06
COL21A1-209ENST00000482933 MUC21A0A140T8X8 626 aa8.46□□□□□ -1.06
COL21A1-209ENST00000482933 SMR3BP02814 79 aaPredicted RBP8.46□□□□□ -1.06
COL21A1-209ENST00000482933 INAFM2P0DMQ5 153 aa8.46□□□□□ -1.06
COL21A1-209ENST00000482933 PKIAP61925 76 aa8.46□□□□□ -1.06
COL21A1-209ENST00000482933 JOSD1Q15040 202 aaPredicted RBP8.46□□□□□ -1.06
COL21A1-209ENST00000482933 PDZD11Q5EBL8 140 aa8.46□□□□□ -1.06
COL21A1-209ENST00000482933 UBE2WQ96B02 151 aa8.46□□□□□ -1.06
COL21A1-209ENST00000482933 AP1S3Q96PC3 154 aa8.46□□□□□ -1.06
COL21A1-209ENST00000482933 IGLC6P0CF74 106 aa8.45□□□□□ -1.06
COL21A1-209ENST00000482933 CTRLP40313 264 aa8.45□□□□□ -1.06
COL21A1-209ENST00000482933 SSTP61278 116 aa8.45□□□□□ -1.06
COL21A1-209ENST00000482933 WFDC2Q14508 124 aa8.45□□□□□ -1.06
COL21A1-209ENST00000482933 Q8N976 141 aa8.45□□□□□ -1.06
COL21A1-209ENST00000482933 FER1L6-AS1Q8NA97 138 aa8.45□□□□□ -1.06
COL21A1-209ENST00000482933 BAALCQ8WXS3 180 aa8.45□□□□□ -1.06
COL21A1-209ENST00000482933 CNFNQ9BYD5 112 aa8.45□□□□□ -1.06
COL21A1-209ENST00000482933 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.44□□□□□ -1.06
COL21A1-209ENST00000482933 LECT2O14960 151 aa8.44□□□□□ -1.06
COL21A1-209ENST00000482933 CRPP02741 224 aa8.44□□□□□ -1.06
COL21A1-209ENST00000482933 GZMBP10144 247 aa8.44□□□□□ -1.06
COL21A1-209ENST00000482933 CACNG7P62955 275 aa8.44□□□□□ -1.06
COL21A1-209ENST00000482933 CHCHD1Q96BP2 118 aaKnown RBP8.44□□□□□ -1.06
COL21A1-209ENST00000482933 TSTD3H0UI37 97 aa8.43□□□□□ -1.06
COL21A1-209ENST00000482933 H7C1H1 209 aa8.43□□□□□ -1.06
COL21A1-209ENST00000482933 HSBP1O75506 76 aa8.43□□□□□ -1.06
COL21A1-209ENST00000482933 PPBPP02775 128 aa8.43□□□□□ -1.06
COL21A1-209ENST00000482933 LYZL1Q6UWQ5 148 aa8.43□□□□□ -1.06
COL21A1-209ENST00000482933 TPPP3Q9BW30 176 aa8.43□□□□□ -1.06
COL21A1-209ENST00000482933 C1orf43Q9BWL3 253 aa8.43□□□□□ -1.06
COL21A1-209ENST00000482933 KIF25-AS1Q9Y6Z4 181 aa8.43□□□□□ -1.06
COL21A1-209ENST00000482933 SERF1AO75920 110 aa8.42□□□□□ -1.06
COL21A1-209ENST00000482933 HAMPP81172 84 aa8.42□□□□□ -1.06
COL21A1-209ENST00000482933 DNAJC30Q96LL9 226 aa8.42□□□□□ -1.06
COL21A1-209ENST00000482933 CHCHD5Q9BSY4 110 aa8.42□□□□□ -1.06
COL21A1-209ENST00000482933 ALKBH7Q9BT30 221 aaPredicted RBP8.42□□□□□ -1.06
COL21A1-209ENST00000482933 FAM30AQ9NZY2 134 aa8.42□□□□□ -1.06
COL21A1-209ENST00000482933 LAMTOR2Q9Y2Q5 125 aa8.42□□□□□ -1.06
COL21A1-209ENST00000482933 IFITM10A6NMD0 228 aa8.41□□□□□ -1.06
COL21A1-209ENST00000482933 ANGP03950 147 aaKnown RBP8.41□□□□□ -1.06
COL21A1-209ENST00000482933 C14orf177Q52M58 125 aa8.41□□□□□ -1.06
COL21A1-209ENST00000482933 MPV17L2Q567V2 206 aa8.41□□□□□ -1.06
COL21A1-209ENST00000482933 PYY3Q5JQD4 70 aa8.41□□□□□ -1.06
COL21A1-209ENST00000482933 VPS13BQ7Z7G8 4022 aa8.41□□□□□ -1.06
COL21A1-209ENST00000482933 TRBV25-1A0A075B6N4 114 aa8.4□□□□□ -1.06
COL21A1-209ENST00000482933 SCGB1D1O95968 90 aa8.4□□□□□ -1.06
COL21A1-209ENST00000482933 MGPP08493 103 aa8.4□□□□□ -1.06
COL21A1-209ENST00000482933 AMTP48728 403 aa8.4□□□□□ -1.06
COL21A1-209ENST00000482933 ENHOQ6UWT2 76 aa8.4□□□□□ -1.06
COL21A1-209ENST00000482933 Q6ZSA8 131 aa8.4□□□□□ -1.06
COL21A1-209ENST00000482933 C18orf32Q8TCD1 76 aa8.4□□□□□ -1.06
COL21A1-209ENST00000482933 PCP4L1A6NKN8 68 aa8.39□□□□□ -1.07
COL21A1-209ENST00000482933 TWIST1Q15672 202 aa8.39□□□□□ -1.07
COL21A1-209ENST00000482933 MIAQ16674 131 aa8.39□□□□□ -1.07
COL21A1-209ENST00000482933 KIAA1644Q3SXP7 199 aa8.39□□□□□ -1.07
COL21A1-209ENST00000482933 ORMDL3Q8N138 153 aa8.39□□□□□ -1.07
COL21A1-209ENST00000482933 TMEM191AQ9H0A3 160 aa8.39□□□□□ -1.07
COL21A1-209ENST00000482933 M0QY20 66 aa8.38□□□□□ -1.07
COL21A1-209ENST00000482933 NTF3P20783 257 aa8.38□□□□□ -1.07
COL21A1-209ENST00000482933 FAM104BQ5XKR9 115 aa8.38□□□□□ -1.07
COL21A1-209ENST00000482933 NTM-AS1Q6ZSK4 140 aa8.38□□□□□ -1.07
COL21A1-209ENST00000482933 IGHV1-24A0A0C4DH33 117 aa8.37□□□□□ -1.07
COL21A1-209ENST00000482933 C20orf202A1L168 122 aa8.37□□□□□ -1.07
COL21A1-209ENST00000482933 PPP1R17O96001 155 aa8.37□□□□□ -1.07
COL21A1-209ENST00000482933 LINC00614P0C842 121 aa8.37□□□□□ -1.07
COL21A1-209ENST00000482933 PMCHL1Q16048 86 aa8.37□□□□□ -1.07
COL21A1-209ENST00000482933 SUMO4Q6EEV6 95 aa8.37□□□□□ -1.07
COL21A1-209ENST00000482933 DPH3P1Q9H4G8 78 aa8.37□□□□□ -1.07
COL21A1-209ENST00000482933 HSPB8Q9UJY1 196 aa8.37□□□□□ -1.07
COL21A1-209ENST00000482933 GAGE6Q13070 117 aa8.37□□□□□ -1.07
COL21A1-209ENST00000482933 RNASEKQ6P5S7 137 aaKnown RBP8.37□□□□□ -1.07
COL21A1-209ENST00000482933 FA2HQ7L5A8 372 aa8.37□□□□□ -1.07
COL21A1-209ENST00000482933 PRSS3P2Q8NHM4 247 aa8.37□□□□□ -1.07
COL21A1-209ENST00000482933 CKS2P33552 79 aa8.36□□□□□ -1.07
COL21A1-209ENST00000482933 RBX1P62877 108 aa8.36□□□□□ -1.07
COL21A1-209ENST00000482933 PRR34Q9NV39 138 aa8.36□□□□□ -1.07
COL21A1-209ENST00000482933 LINC01620Q4KN68 170 aa8.35□□□□□ -1.07
COL21A1-209ENST00000482933 LINC00269Q8N2A0 174 aa8.35□□□□□ -1.07
COL21A1-209ENST00000482933 PRELID3AQ96N28 172 aa8.34□□□□□ -1.07
COL21A1-209ENST00000482933 TMEM243Q9BU79 118 aa8.34□□□□□ -1.07
COL21A1-209ENST00000482933 CDIP1Q9H305 208 aa8.34□□□□□ -1.07
COL21A1-209ENST00000482933 NXT2Q9NPJ8 142 aaKnown RBP8.34□□□□□ -1.07
COL21A1-209ENST00000482933 A0A1B0GUV1 79 aa8.33□□□□□ -1.08
COL21A1-209ENST00000482933 USP17L23D6RBM5 183 aa8.33□□□□□ -1.08
COL21A1-209ENST00000482933 LEPROTL1O95214 131 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms