RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 HIST1H2BKO60814 126 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 HIST1H2BJP06899 126 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 LINC00694P0DN24 101 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 HIST1H2BOP23527 126 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 HIST1H2BBP33778 126 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 IFI27P40305 119 aaPredicted RBP11.21□□□□□ -0.61
NUP58-212ENST00000481980 HIST1H2BDP58876 126 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 PKIAP61925 76 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 HIST1H2BCP62807 126 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 HAMPP81172 84 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 Q0VG73 95 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 HIST2H2BEQ16778 126 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 LINC01556Q5JQF7 62 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.21□□□□□ -0.61
NUP58-212ENST00000481980 HIST1H2BHQ93079 126 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 HIST1H2BNQ99877 126 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 HIST1H2BMQ99879 126 aa11.21□□□□□ -0.61
NUP58-212ENST00000481980 IBA57-AS1B1ANH7 110 aa11.2□□□□□ -0.62
NUP58-212ENST00000481980 HSBP1O75506 76 aa11.2□□□□□ -0.62
NUP58-212ENST00000481980 LAGE3Q14657 143 aa11.2□□□□□ -0.62
NUP58-212ENST00000481980 CHCHD1Q96BP2 118 aaKnown RBP11.2□□□□□ -0.62
NUP58-212ENST00000481980 KRTAP3-3Q9BYR6 98 aa11.2□□□□□ -0.62
NUP58-212ENST00000481980 KRTAP3-2Q9BYR7 98 aa11.2□□□□□ -0.62
NUP58-212ENST00000481980 LINC00614P0C842 121 aa11.19□□□□□ -0.62
NUP58-212ENST00000481980 TMEM243Q9BU79 118 aa11.19□□□□□ -0.62
NUP58-212ENST00000481980 Q9UF83 564 aa11.19□□□□□ -0.62
NUP58-212ENST00000481980 TRBV6-8A0A0A6YYG3 113 aa11.18□□□□□ -0.62
NUP58-212ENST00000481980 LINC01549A6NIU2 74 aa11.18□□□□□ -0.62
NUP58-212ENST00000481980 NDUFA6P56556 154 aa11.18□□□□□ -0.62
NUP58-212ENST00000481980 LELP1Q5T871 98 aa11.18□□□□□ -0.62
NUP58-212ENST00000481980 NIT1Q86X76 327 aa11.18□□□□□ -0.62
NUP58-212ENST00000481980 Q8N814 137 aa11.18□□□□□ -0.62
NUP58-212ENST00000481980 CHCHD5Q9BSY4 110 aa11.18□□□□□ -0.62
NUP58-212ENST00000481980 TSHBP01222 138 aa11.17□□□□□ -0.62
NUP58-212ENST00000481980 Q9HAA7 133 aa11.17□□□□□ -0.62
NUP58-212ENST00000481980 AMMECR1LQ6DCA0 310 aa11.16□□□□□ -0.62
NUP58-212ENST00000481980 CYSLTR1Q9Y271 337 aa11.16□□□□□ -0.62
NUP58-212ENST00000481980 DEFB104AQ8WTQ1 72 aa11.15□□□□□ -0.62
NUP58-212ENST00000481980 FAM30AQ9NZY2 134 aa11.15□□□□□ -0.62
NUP58-212ENST00000481980 TMA7Q9Y2S6 64 aaKnown RBP11.15□□□□□ -0.62
NUP58-212ENST00000481980 A0A087WX48 190 aa11.14□□□□□ -0.63
NUP58-212ENST00000481980 TMEM262E9PQX1 116 aa11.14□□□□□ -0.63
NUP58-212ENST00000481980 H7C423 109 aa11.14□□□□□ -0.63
NUP58-212ENST00000481980 SERF1AO75920 110 aa11.14□□□□□ -0.63
NUP58-212ENST00000481980 HBDP02042 147 aa11.14□□□□□ -0.63
NUP58-212ENST00000481980 DGAT2L7PQ6IED9 249 aa11.14□□□□□ -0.63
NUP58-212ENST00000481980 TMEM101Q96IK0 257 aa11.14□□□□□ -0.63
NUP58-212ENST00000481980 IGHV3-30P01768 117 aa11.13□□□□□ -0.63
NUP58-212ENST00000481980 IGHV3-33P01772 117 aa11.13□□□□□ -0.63
NUP58-212ENST00000481980 IGHV3-30-3P0DP02 117 aa11.13□□□□□ -0.63
NUP58-212ENST00000481980 IGHV3-30-5P0DP03 117 aa11.13□□□□□ -0.63
NUP58-212ENST00000481980 S100A2P29034 98 aa11.13□□□□□ -0.63
NUP58-212ENST00000481980 C2orf66Q6UXQ4 117 aa11.12□□□□□ -0.63
NUP58-212ENST00000481980 TM2D2Q9BX73 214 aa11.12□□□□□ -0.63
NUP58-212ENST00000481980 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.11□□□□□ -0.63
NUP58-212ENST00000481980 IGKV2-29A2NJV5 120 aaPredicted RBP11.11□□□□□ -0.63
NUP58-212ENST00000481980 LINC01546A6NGU7 62 aa11.11□□□□□ -0.63
NUP58-212ENST00000481980 J3QL48 77 aa11.11□□□□□ -0.63
NUP58-212ENST00000481980 PAPPA-AS1Q5QFB9 102 aa11.11□□□□□ -0.63
NUP58-212ENST00000481980 C20orf203Q8NBC4 194 aa11.11□□□□□ -0.63
NUP58-212ENST00000481980 ZNF25P17030 456 aaPredicted RBP11.1□□□□□ -0.63
NUP58-212ENST00000481980 GAGE6Q13070 117 aa11.1□□□□□ -0.63
NUP58-212ENST00000481980 COA6Q5JTJ3 125 aaKnown RBP11.1□□□□□ -0.63
NUP58-212ENST00000481980 Q6ZN92 141 aa11.1□□□□□ -0.63
NUP58-212ENST00000481980 NTM-AS1Q6ZSK4 140 aa11.1□□□□□ -0.63
NUP58-212ENST00000481980 OR5A1Q8NGJ0 315 aa11.1□□□□□ -0.63
NUP58-212ENST00000481980 CHCHD7Q9BUK0 85 aa11.1□□□□□ -0.63
NUP58-212ENST00000481980 SPANXA1Q9NS26 97 aa11.1□□□□□ -0.63
NUP58-212ENST00000481980 ESDP10768 282 aa11.09□□□□□ -0.63
NUP58-212ENST00000481980 WFDC2Q14508 124 aa11.09□□□□□ -0.63
NUP58-212ENST00000481980 HSPB8Q9UJY1 196 aa11.09□□□□□ -0.63
NUP58-212ENST00000481980 ATP5LO75964 103 aa11.08□□□□□ -0.64
NUP58-212ENST00000481980 PLA2G1BP04054 148 aaKnown RBP11.08□□□□□ -0.64
NUP58-212ENST00000481980 FGF6P10767 208 aa11.08□□□□□ -0.64
NUP58-212ENST00000481980 PMCHL1Q16048 86 aa11.08□□□□□ -0.64
NUP58-212ENST00000481980 Q6ZSA8 131 aa11.08□□□□□ -0.64
NUP58-212ENST00000481980 TOMM6Q96B49 74 aa11.08□□□□□ -0.64
NUP58-212ENST00000481980 SCGB3A1Q96QR1 104 aa11.08□□□□□ -0.64
NUP58-212ENST00000481980 LEPROTL1O95214 131 aa11.07□□□□□ -0.64
NUP58-212ENST00000481980 Q8N3U1 123 aa11.07□□□□□ -0.64
NUP58-212ENST00000481980 URB1-AS1Q96HZ7 61 aa11.07□□□□□ -0.64
NUP58-212ENST00000481980 TRAV8-3A0A0A6YYJ7 113 aa11.06□□□□□ -0.64
NUP58-212ENST00000481980 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.06□□□□□ -0.64
NUP58-212ENST00000481980 RPL39P62891 51 aaKnown RBP11.06□□□□□ -0.64
NUP58-212ENST00000481980 PDZD11Q5EBL8 140 aa11.06□□□□□ -0.64
NUP58-212ENST00000481980 FAM19A2Q8N3H0 131 aa11.06□□□□□ -0.64
NUP58-212ENST00000481980 TMEM141Q96I45 108 aa11.06□□□□□ -0.64
NUP58-212ENST00000481980 TIMM21Q9BVV7 248 aa11.06□□□□□ -0.64
NUP58-212ENST00000481980 LECT2O14960 151 aa11.05□□□□□ -0.64
NUP58-212ENST00000481980 CRPP02741 224 aa11.05□□□□□ -0.64
NUP58-212ENST00000481980 NPSP0C0P6 89 aa11.05□□□□□ -0.64
NUP58-212ENST00000481980 ERASQ7Z444 233 aa11.05□□□□□ -0.64
NUP58-212ENST00000481980 MRPL52Q86TS9 123 aaKnown RBP11.05□□□□□ -0.64
NUP58-212ENST00000481980 LINC00528Q8N1L1 170 aa11.05□□□□□ -0.64
NUP58-212ENST00000481980 TIMM17AQ99595 171 aa11.05□□□□□ -0.64
NUP58-212ENST00000481980 C2orf88Q9BSF0 95 aa11.05□□□□□ -0.64
NUP58-212ENST00000481980 KRTAP29-1A8MX34 341 aaPredicted RBP11.04□□□□□ -0.64
NUP58-212ENST00000481980 ANGP03950 147 aaKnown RBP11.04□□□□□ -0.64
NUP58-212ENST00000481980 PACRGQ96M98 296 aaPredicted RBP11.04□□□□□ -0.64
NUP58-212ENST00000481980 UBE2D4Q9Y2X8 147 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms