RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 HIST1H2BHQ93079 126 aa7.55□□□□□ -1.2
CLDN11-205ENST00000480067 UBE2WQ96B02 151 aa7.55□□□□□ -1.2
CLDN11-205ENST00000480067 HIST1H2BNQ99877 126 aa7.55□□□□□ -1.2
CLDN11-205ENST00000480067 HIST1H2BMQ99879 126 aa7.55□□□□□ -1.2
CLDN11-205ENST00000480067 TIMM21Q9BVV7 248 aa7.55□□□□□ -1.2
CLDN11-205ENST00000480067 SPANXA1Q9NS26 97 aa7.55□□□□□ -1.2
CLDN11-205ENST00000480067 TRAV8-3A0A0A6YYJ7 113 aa7.54□□□□□ -1.2
CLDN11-205ENST00000480067 ZNF664Q8N3J9 261 aa7.54□□□□□ -1.2
CLDN11-205ENST00000480067 TOMM6Q96B49 74 aa7.54□□□□□ -1.2
CLDN11-205ENST00000480067 Q9HAA7 133 aa7.54□□□□□ -1.2
CLDN11-205ENST00000480067 CDC42SE2Q9NRR3 84 aa7.54□□□□□ -1.2
CLDN11-205ENST00000480067 DNAH2Q9P225 4427 aa7.54□□□□□ -1.2
CLDN11-205ENST00000480067 RYR2Q92736 4967 aa7.54□□□□□ -1.2
CLDN11-205ENST00000480067 LINC01549A6NIU2 74 aa7.54□□□□□ -1.2
CLDN11-205ENST00000480067 HSBP1O75506 76 aa7.54□□□□□ -1.2
CLDN11-205ENST00000480067 REG3AQ06141 175 aa7.54□□□□□ -1.2
CLDN11-205ENST00000480067 C1orf134Q5TEV5 83 aa7.54□□□□□ -1.2
CLDN11-205ENST00000480067 CLPSL2Q6UWE3 100 aa7.54□□□□□ -1.2
CLDN11-205ENST00000480067 PYGO1Q9Y3Y4 419 aa7.54□□□□□ -1.2
CLDN11-205ENST00000480067 RYR3Q15413 4870 aa7.53□□□□□ -1.2
CLDN11-205ENST00000480067 SERF1AO75920 110 aa7.53□□□□□ -1.2
CLDN11-205ENST00000480067 HBDP02042 147 aa7.53□□□□□ -1.2
CLDN11-205ENST00000480067 PMCHL1Q16048 86 aa7.53□□□□□ -1.2
CLDN11-205ENST00000480067 ENHOQ6UWT2 76 aa7.53□□□□□ -1.2
CLDN11-205ENST00000480067 NFE4Q86UQ8 179 aa7.53□□□□□ -1.2
CLDN11-205ENST00000480067 C6orf223Q8N319 242 aa7.53□□□□□ -1.2
CLDN11-205ENST00000480067 SCGB3A1Q96QR1 104 aa7.53□□□□□ -1.2
CLDN11-205ENST00000480067 PRR34Q9NV39 138 aa7.53□□□□□ -1.2
CLDN11-205ENST00000480067 IGKV3OR2-268A0A0C4DH90 116 aa7.52□□□□□ -1.21
CLDN11-205ENST00000480067 IGIPA6NJ69 53 aa7.52□□□□□ -1.21
CLDN11-205ENST00000480067 MRPS36P82909 103 aaKnown RBP7.52□□□□□ -1.21
CLDN11-205ENST00000480067 MIAQ16674 131 aa7.52□□□□□ -1.21
CLDN11-205ENST00000480067 ERASQ7Z444 233 aa7.52□□□□□ -1.21
CLDN11-205ENST00000480067 OPRPNQ99935 248 aaPredicted RBP7.52□□□□□ -1.21
CLDN11-205ENST00000480067 J3QL48 77 aa7.51□□□□□ -1.21
CLDN11-205ENST00000480067 RNASE13Q5GAN3 156 aaKnown RBP7.51□□□□□ -1.21
CLDN11-205ENST00000480067 Q6ZN92 141 aa7.51□□□□□ -1.21
CLDN11-205ENST00000480067 Q6ZUT4 128 aa7.51□□□□□ -1.21
CLDN11-205ENST00000480067 RMI2Q96E14 147 aa7.51□□□□□ -1.21
CLDN11-205ENST00000480067 TMEM141Q96I45 108 aa7.51□□□□□ -1.21
CLDN11-205ENST00000480067 DNAH6Q9C0G6 4158 aa7.51□□□□□ -1.21
CLDN11-205ENST00000480067 IGKV2D-24A0A075B6R9 120 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 TRAV8-4A0A0B4J246 113 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 NPSP0C0P6 89 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 PAPPA-AS1Q5QFB9 102 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 FAM19A2Q8N3H0 131 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 TIMM17AQ99595 171 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 C1orf43Q9BWL3 253 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 TM2D2Q9BX73 214 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 VCX2Q9H322 139 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 COX11Q9Y6N1 276 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 IGLV10-54A0A075B6I4 117 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 IGLV4-3A0A075B6K6 122 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 A0A096LNJ9 63 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.5□□□□□ -1.21
CLDN11-205ENST00000480067 PSCAO43653 123 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 NUPR1O60356 82 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 NDUFA6P56556 154 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 FAM104AQ969W3 186 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 DNAH10Q8IVF4 4471 aa7.5□□□□□ -1.21
CLDN11-205ENST00000480067 TRAV13-1A0A0B4J241 112 aa7.49□□□□□ -1.21
CLDN11-205ENST00000480067 LINC00959A0A1B0GUT2 108 aa7.49□□□□□ -1.21
CLDN11-205ENST00000480067 LINC00310P59036 64 aa7.49□□□□□ -1.21
CLDN11-205ENST00000480067 SS18Q15532 418 aa7.49□□□□□ -1.21
CLDN11-205ENST00000480067 TEX43Q6ZNM6 134 aa7.49□□□□□ -1.21
CLDN11-205ENST00000480067 C2orf88Q9BSF0 95 aa7.49□□□□□ -1.21
CLDN11-205ENST00000480067 IFITM10A6NMD0 228 aa7.48□□□□□ -1.21
CLDN11-205ENST00000480067 CCL25O15444 150 aa7.48□□□□□ -1.21
CLDN11-205ENST00000480067 ATP5LO75964 103 aa7.48□□□□□ -1.21
CLDN11-205ENST00000480067 PDZD11Q5EBL8 140 aa7.48□□□□□ -1.21
CLDN11-205ENST00000480067 COA6Q5JTJ3 125 aaKnown RBP7.47□□□□□ -1.21
CLDN11-205ENST00000480067 CHCHD10Q8WYQ3 142 aaPredicted RBP7.47□□□□□ -1.21
CLDN11-205ENST00000480067 RTL8CO15255 209 aa7.46□□□□□ -1.21
CLDN11-205ENST00000480067 LEPROTL1O95214 131 aa7.46□□□□□ -1.21
CLDN11-205ENST00000480067 XCL1P47992 114 aa7.46□□□□□ -1.21
CLDN11-205ENST00000480067 Q6ZRN7 208 aaPredicted RBP7.46□□□□□ -1.21
CLDN11-205ENST00000480067 AMELXQ99217 191 aa7.46□□□□□ -1.21
CLDN11-205ENST00000480067 S100A6P06703 90 aa7.46□□□□□ -1.22
CLDN11-205ENST00000480067 PRSS1P07477 247 aa7.46□□□□□ -1.22
CLDN11-205ENST00000480067 FABP4P15090 132 aa7.46□□□□□ -1.22
CLDN11-205ENST00000480067 ZC2HC1BQ5TFG8 222 aa7.46□□□□□ -1.22
CLDN11-205ENST00000480067 BAALCQ8WXS3 180 aa7.46□□□□□ -1.22
CLDN11-205ENST00000480067 HSPB8Q9UJY1 196 aa7.46□□□□□ -1.22
CLDN11-205ENST00000480067 GAGE12HA6NDE8 117 aa7.45□□□□□ -1.22
CLDN11-205ENST00000480067 PMVKQ15126 192 aa7.45□□□□□ -1.22
CLDN11-205ENST00000480067 LINC00173Q6ZV60 143 aa7.45□□□□□ -1.22
CLDN11-205ENST00000480067 IFI27L1Q96BM0 104 aa7.45□□□□□ -1.22
CLDN11-205ENST00000480067 CST9LQ9H4G1 147 aa7.45□□□□□ -1.22
CLDN11-205ENST00000480067 PRSS29PA6NIE9 313 aa7.44□□□□□ -1.22
CLDN11-205ENST00000480067 UBE2D1P51668 147 aa7.44□□□□□ -1.22
CLDN11-205ENST00000480067 CD164L2Q6UWJ8 174 aa7.44□□□□□ -1.22
CLDN11-205ENST00000480067 LINC00336Q6ZUF6 198 aa7.44□□□□□ -1.22
CLDN11-205ENST00000480067 DNAH17Q9UFH2 4485 aa7.44□□□□□ -1.22
CLDN11-205ENST00000480067 SEC11AP67812 179 aa7.43□□□□□ -1.22
CLDN11-205ENST00000480067 KRTAP26-1Q6PEX3 210 aa7.43□□□□□ -1.22
CLDN11-205ENST00000480067 MAPKAPK5-AS1Q8N8E1 139 aa7.43□□□□□ -1.22
CLDN11-205ENST00000480067 FOXI1Q12951 378 aa7.42□□□□□ -1.22
CLDN11-205ENST00000480067 LINC00242Q5T6M2 205 aa7.42□□□□□ -1.22
CLDN11-205ENST00000480067 FRAS1Q86XX4 4008 aa7.42□□□□□ -1.22
CLDN11-205ENST00000480067 COX7A2LO14548 114 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms