RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 FAM213BQ8TBF2 198 aa0.6□□□□□ -2.31
VLDLR-204ENST00000478776 CDC42SE2Q9NRR3 84 aa0.6□□□□□ -2.31
VLDLR-204ENST00000478776 LINC01558Q9Y6Z2 57 aa0.6□□□□□ -2.31
VLDLR-204ENST00000478776 ARHGEF5Q12774 1597 aa0.6□□□□□ -2.31
VLDLR-204ENST00000478776 DIP2CQ9Y2E4 1556 aa0.6□□□□□ -2.31
VLDLR-204ENST00000478776 ZNF236Q9UL36 1845 aa0.59□□□□□ -2.31
VLDLR-204ENST00000478776 KCPQ6ZWJ8 1503 aa0.59□□□□□ -2.31
VLDLR-204ENST00000478776 MEGF8Q7Z7M0 2845 aa0.59□□□□□ -2.31
VLDLR-204ENST00000478776 ABCC5O15440 1437 aa0.59□□□□□ -2.31
VLDLR-204ENST00000478776 TRAV22A0A0B4J277 110 aa0.59□□□□□ -2.31
VLDLR-204ENST00000478776 APOC3P02656 99 aa0.59□□□□□ -2.31
VLDLR-204ENST00000478776 S100A8P05109 93 aa0.59□□□□□ -2.31
VLDLR-204ENST00000478776 KRTDAPP60985 99 aa0.59□□□□□ -2.31
VLDLR-204ENST00000478776 Q0VG73 95 aa0.59□□□□□ -2.31
VLDLR-204ENST00000478776 TMEM170BQ5T4T1 132 aa0.59□□□□□ -2.31
VLDLR-204ENST00000478776 SBF2Q86WG5 1849 aa0.59□□□□□ -2.32
VLDLR-204ENST00000478776 KDM3BQ7LBC6 1761 aa0.58□□□□□ -2.32
VLDLR-204ENST00000478776 S100A10P60903 97 aa0.58□□□□□ -2.32
VLDLR-204ENST00000478776 MANBALQ9NQG1 85 aa0.58□□□□□ -2.32
VLDLR-204ENST00000478776 PRO1854Q9UHT4 67 aa0.58□□□□□ -2.32
VLDLR-204ENST00000478776 SHANK2Q9UPX8 1470 aa0.58□□□□□ -2.32
VLDLR-204ENST00000478776 KDM5AP29375 1690 aaKnown RBP0.58□□□□□ -2.32
VLDLR-204ENST00000478776 EHBP1L1Q8N3D4 1523 aa0.58□□□□□ -2.32
VLDLR-204ENST00000478776 CCNB3Q8WWL7 1395 aa0.57□□□□□ -2.32
VLDLR-204ENST00000478776 WNK3Q9BYP7 1800 aa0.57□□□□□ -2.32
VLDLR-204ENST00000478776 TOP2BQ02880 1626 aa0.57□□□□□ -2.32
VLDLR-204ENST00000478776 RAPGEF6Q8TEU7 1601 aa0.57□□□□□ -2.32
VLDLR-204ENST00000478776 GAPVD1Q14C86 1478 aa0.57□□□□□ -2.32
VLDLR-204ENST00000478776 TEX14Q8IWB6 1497 aa0.57□□□□□ -2.32
VLDLR-204ENST00000478776 CRYM-AS1A6NIL9 109 aa0.57□□□□□ -2.32
VLDLR-204ENST00000478776 SFT2D2O95562 160 aa0.57□□□□□ -2.32
VLDLR-204ENST00000478776 COX6CP09669 75 aa0.57□□□□□ -2.32
VLDLR-204ENST00000478776 UBE2DNLQ8IWF7 75 aa0.57□□□□□ -2.32
VLDLR-204ENST00000478776 LINC00472Q9H8W2 130 aa0.57□□□□□ -2.32
VLDLR-204ENST00000478776 NPVFQ9HCQ7 196 aa0.57□□□□□ -2.32
VLDLR-204ENST00000478776 HMGXB3Q12766 1538 aa0.57□□□□□ -2.32
VLDLR-204ENST00000478776 FYCO1Q9BQS8 1478 aa0.56□□□□□ -2.32
VLDLR-204ENST00000478776 CADP27708 2225 aa0.56□□□□□ -2.32
VLDLR-204ENST00000478776 hADV29S1A0JD25 119 aa0.56□□□□□ -2.32
VLDLR-204ENST00000478776 M0R143 59 aa0.56□□□□□ -2.32
VLDLR-204ENST00000478776 NXT2Q9NPJ8 142 aaKnown RBP0.56□□□□□ -2.32
VLDLR-204ENST00000478776 AP4S1Q9Y587 144 aa0.56□□□□□ -2.32
VLDLR-204ENST00000478776 PLXNB2O15031 1838 aa0.56□□□□□ -2.32
VLDLR-204ENST00000478776 PRDM15P57071 1507 aaPredicted RBP0.55□□□□□ -2.32
VLDLR-204ENST00000478776 MYO7AQ13402 2215 aa0.55□□□□□ -2.32
VLDLR-204ENST00000478776 MPC2O95563 127 aa0.55□□□□□ -2.32
VLDLR-204ENST00000478776 SEC11AP67812 179 aa0.55□□□□□ -2.32
VLDLR-204ENST00000478776 COX6A2Q02221 97 aa0.55□□□□□ -2.32
VLDLR-204ENST00000478776 NCMAPQ5T1S8 102 aa0.55□□□□□ -2.32
VLDLR-204ENST00000478776 AKAP12Q02952 1782 aa0.55□□□□□ -2.32
VLDLR-204ENST00000478776 ABCC10Q5T3U5 1492 aa0.54□□□□□ -2.32
VLDLR-204ENST00000478776 ZNF815PA8K554 130 aa0.54□□□□□ -2.32
VLDLR-204ENST00000478776 GNGT2O14610 69 aa0.54□□□□□ -2.32
VLDLR-204ENST00000478776 MT-ATP8P03928 68 aa0.54□□□□□ -2.32
VLDLR-204ENST00000478776 MGPP08493 103 aa0.54□□□□□ -2.32
VLDLR-204ENST00000478776 LINC00032P0C843 101 aa0.54□□□□□ -2.32
VLDLR-204ENST00000478776 TRAPPC2P0DI81 140 aa0.54□□□□□ -2.32
VLDLR-204ENST00000478776 TRAPPC2BP0DI82 140 aa0.54□□□□□ -2.32
VLDLR-204ENST00000478776 SSBP3-AS1Q7Z2R9 100 aa0.54□□□□□ -2.32
VLDLR-204ENST00000478776 FAM223AQ8IWN6 122 aa0.54□□□□□ -2.32
VLDLR-204ENST00000478776 FAIMQ9NVQ4 179 aa0.54□□□□□ -2.32
VLDLR-204ENST00000478776 ARL2-SNX15V9GYD0 113 aa0.54□□□□□ -2.32
VLDLR-204ENST00000478776 ANKRD26Q9UPS8 1709 aa0.54□□□□□ -2.32
VLDLR-204ENST00000478776 LRP6O75581 1613 aa0.53□□□□□ -2.32
VLDLR-204ENST00000478776 SCN7AQ01118 1682 aa0.53□□□□□ -2.32
VLDLR-204ENST00000478776 COL4A6Q14031 1691 aa0.53□□□□□ -2.32
VLDLR-204ENST00000478776 BTAF1O14981 1849 aa0.53□□□□□ -2.32
VLDLR-204ENST00000478776 NDUFC1O43677 76 aa0.53□□□□□ -2.32
VLDLR-204ENST00000478776 IGLC1P0CG04 106 aa0.53□□□□□ -2.32
VLDLR-204ENST00000478776 SPRR4Q96PI1 79 aa0.53□□□□□ -2.32
VLDLR-204ENST00000478776 DPY30Q9C005 99 aa0.53□□□□□ -2.32
VLDLR-204ENST00000478776 FRAS1Q86XX4 4008 aa0.53□□□□□ -2.32
VLDLR-204ENST00000478776 A0A0D9SFI3 127 aa0.52□□□□□ -2.33
VLDLR-204ENST00000478776 PRH1P02810 166 aa0.52□□□□□ -2.33
VLDLR-204ENST00000478776 SAA2P0DJI9 122 aaPredicted RBP0.52□□□□□ -2.33
VLDLR-204ENST00000478776 PKIAP61925 76 aa0.52□□□□□ -2.33
VLDLR-204ENST00000478776 HAMPP81172 84 aa0.52□□□□□ -2.33
VLDLR-204ENST00000478776 Q6JHZ5 121 aa0.52□□□□□ -2.33
VLDLR-204ENST00000478776 CNFNQ9BYD5 112 aa0.52□□□□□ -2.33
VLDLR-204ENST00000478776 ANKRD36BQ8N2N9 1353 aa0.52□□□□□ -2.33
VLDLR-204ENST00000478776 APCP25054 2843 aa0.52□□□□□ -2.33
VLDLR-204ENST00000478776 NSD3Q9BZ95 1437 aa0.52□□□□□ -2.33
VLDLR-204ENST00000478776 MAGI1Q96QZ7 1491 aaPredicted RBP0.52□□□□□ -2.33
VLDLR-204ENST00000478776 ATOX1O00244 68 aa0.51□□□□□ -2.33
VLDLR-204ENST00000478776 ADGRL2O95490 1459 aa0.51□□□□□ -2.33
VLDLR-204ENST00000478776 TROQ12816 1431 aaPredicted RBP0.51□□□□□ -2.33
VLDLR-204ENST00000478776 COL5A1-AS1Q5SY13 56 aa0.51□□□□□ -2.33
VLDLR-204ENST00000478776 SFTA2Q6UW10 78 aa0.51□□□□□ -2.33
VLDLR-204ENST00000478776 PMCHL2Q9BQD1 86 aa0.51□□□□□ -2.33
VLDLR-204ENST00000478776 MLH3Q9UHC1 1453 aa0.51□□□□□ -2.33
VLDLR-204ENST00000478776 CACNA1HO95180 2353 aa0.5□□□□□ -2.33
VLDLR-204ENST00000478776 MUC5BQ9HC84 5762 aaPredicted RBP0.5□□□□□ -2.33
VLDLR-204ENST00000478776 NUP188Q5SRE5 1749 aa0.5□□□□□ -2.33
VLDLR-204ENST00000478776 LAMC1P11047 1609 aa0.5□□□□□ -2.33
VLDLR-204ENST00000478776 ERCC6L2Q5T890 1561 aa0.5□□□□□ -2.33
VLDLR-204ENST00000478776 FAM223BA6NKX1 122 aa0.5□□□□□ -2.33
VLDLR-204ENST00000478776 C10orf142B7Z368 130 aa0.5□□□□□ -2.33
VLDLR-204ENST00000478776 KRTAP2-3P0C7H8 128 aa0.5□□□□□ -2.33
VLDLR-204ENST00000478776 S100A3P33764 101 aa0.5□□□□□ -2.33
VLDLR-204ENST00000478776 UBA52P62987 128 aaKnown RBP0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms