RNA–Protein interactions for RNA: ENST00000478327.1

NECTIN3-204, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-204ENST00000478327 UBA52P62987 128 aaKnown RBP0.82□□□□□ -2.28
NECTIN3-204ENST00000478327 SPCS1Q9Y6A9 102 aa0.82□□□□□ -2.28
NECTIN3-204ENST00000478327 DOCK11Q5JSL3 2073 aa0.82□□□□□ -2.28
NECTIN3-204ENST00000478327 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
NECTIN3-204ENST00000478327 NOTCH1P46531 2555 aa0.81□□□□□ -2.28
NECTIN3-204ENST00000478327 TRAV30A0A087WSZ9 112 aa0.81□□□□□ -2.28
NECTIN3-204ENST00000478327 TRAV22A0A0B4J277 110 aa0.81□□□□□ -2.28
NECTIN3-204ENST00000478327 PRO0255Q9UI72 69 aa0.81□□□□□ -2.28
NECTIN3-204ENST00000478327 GNGT2O14610 69 aa0.8□□□□□ -2.28
NECTIN3-204ENST00000478327 PRH1P02810 166 aa0.8□□□□□ -2.28
NECTIN3-204ENST00000478327 SEC11AP67812 179 aa0.8□□□□□ -2.28
NECTIN3-204ENST00000478327 CDC42SE2Q9NRR3 84 aa0.8□□□□□ -2.28
NECTIN3-204ENST00000478327 PI4KAP42356 2102 aa0.8□□□□□ -2.28
NECTIN3-204ENST00000478327 ERCC6L2Q5T890 1561 aa0.79□□□□□ -2.28
NECTIN3-204ENST00000478327 IGLC1P0CG04 106 aa0.79□□□□□ -2.28
NECTIN3-204ENST00000478327 FAM223AQ8IWN6 122 aa0.79□□□□□ -2.28
NECTIN3-204ENST00000478327 SMR3AQ99954 134 aa0.79□□□□□ -2.28
NECTIN3-204ENST00000478327 CNFNQ9BYD5 112 aa0.79□□□□□ -2.28
NECTIN3-204ENST00000478327 FBN2P35556 2912 aa0.79□□□□□ -2.28
NECTIN3-204ENST00000478327 SHANK2Q9UPX8 1470 aa0.79□□□□□ -2.28
NECTIN3-204ENST00000478327 A0A1B0GWA3 101 aa0.78□□□□□ -2.28
NECTIN3-204ENST00000478327 M0R3E3 92 aa0.78□□□□□ -2.28
NECTIN3-204ENST00000478327 ACBD7Q8N6N7 88 aa0.78□□□□□ -2.28
NECTIN3-204ENST00000478327 FDCSPQ8NFU4 85 aa0.78□□□□□ -2.28
NECTIN3-204ENST00000478327 KDM5AP29375 1690 aaKnown RBP0.78□□□□□ -2.29
NECTIN3-204ENST00000478327 LRRC37A2A6NM11 1700 aa0.78□□□□□ -2.29
NECTIN3-204ENST00000478327 hADV29S1A0JD25 119 aa0.77□□□□□ -2.29
NECTIN3-204ENST00000478327 SPINK1P00995 79 aa0.77□□□□□ -2.29
NECTIN3-204ENST00000478327 VAMP8Q9BV40 100 aa0.77□□□□□ -2.29
NECTIN3-204ENST00000478327 CNTLNQ9NXG0 1405 aa0.77□□□□□ -2.29
NECTIN3-204ENST00000478327 KIF21AQ7Z4S6 1674 aa0.77□□□□□ -2.29
NECTIN3-204ENST00000478327 CADP27708 2225 aa0.76□□□□□ -2.29
NECTIN3-204ENST00000478327 UBE2D3P61077 147 aa0.76□□□□□ -2.29
NECTIN3-204ENST00000478327 UBE2D2P62837 147 aa0.76□□□□□ -2.29
NECTIN3-204ENST00000478327 ASH1LQ9NR48 2969 aaKnown RBP0.76□□□□□ -2.29
NECTIN3-204ENST00000478327 ZFYVE16Q7Z3T8 1539 aa0.75□□□□□ -2.29
NECTIN3-204ENST00000478327 JMJD1CQ15652 2540 aa0.75□□□□□ -2.29
NECTIN3-204ENST00000478327 BCE1O60756 84 aa0.75□□□□□ -2.29
NECTIN3-204ENST00000478327 LINC00032P0C843 101 aa0.75□□□□□ -2.29
NECTIN3-204ENST00000478327 PMCHL2Q9BQD1 86 aa0.75□□□□□ -2.29
NECTIN3-204ENST00000478327 PSME4Q14997 1843 aa0.75□□□□□ -2.29
NECTIN3-204ENST00000478327 SPHKAPQ2M3C7 1700 aa0.75□□□□□ -2.29
NECTIN3-204ENST00000478327 MYO7AQ13402 2215 aa0.74□□□□□ -2.29
NECTIN3-204ENST00000478327 FXYD6-FXYD2A0A087WZ82 144 aa0.74□□□□□ -2.29
NECTIN3-204ENST00000478327 M0R143 59 aa0.74□□□□□ -2.29
NECTIN3-204ENST00000478327 NDUFC1O43677 76 aa0.74□□□□□ -2.29
NECTIN3-204ENST00000478327 CFDP00746 253 aaPredicted RBP0.74□□□□□ -2.29
NECTIN3-204ENST00000478327 Q5BKY6 102 aa0.74□□□□□ -2.29
NECTIN3-204ENST00000478327 PRO1933Q9H354 126 aa0.74□□□□□ -2.29
NECTIN3-204ENST00000478327 SHROOM2Q13796 1616 aa0.74□□□□□ -2.29
NECTIN3-204ENST00000478327 CC2D2AQ9P2K1 1620 aa0.74□□□□□ -2.29
NECTIN3-204ENST00000478327 TCHHQ07283 1943 aa0.74□□□□□ -2.29
NECTIN3-204ENST00000478327 MYOM1P52179 1685 aa0.73□□□□□ -2.29
NECTIN3-204ENST00000478327 NAV3Q8IVL0 2385 aa0.73□□□□□ -2.29
NECTIN3-204ENST00000478327 SAA2P0DJI9 122 aaPredicted RBP0.73□□□□□ -2.29
NECTIN3-204ENST00000478327 TMEM263Q8WUH6 116 aaKnown RBP0.73□□□□□ -2.29
NECTIN3-204ENST00000478327 LINC00472Q9H8W2 130 aa0.73□□□□□ -2.29
NECTIN3-204ENST00000478327 EHBP1L1Q8N3D4 1523 aa0.73□□□□□ -2.29
NECTIN3-204ENST00000478327 ZNF236Q9UL36 1845 aa0.73□□□□□ -2.29
NECTIN3-204ENST00000478327 LRP6O75581 1613 aa0.72□□□□□ -2.29
NECTIN3-204ENST00000478327 FAM223BA6NKX1 122 aa0.72□□□□□ -2.29
NECTIN3-204ENST00000478327 S100A8P05109 93 aa0.72□□□□□ -2.29
NECTIN3-204ENST00000478327 PIGYQ3MUY2 71 aa0.72□□□□□ -2.29
NECTIN3-204ENST00000478327 Q8IZM0 81 aa0.72□□□□□ -2.29
NECTIN3-204ENST00000478327 TP53AIP1Q9HCN2 124 aa0.72□□□□□ -2.29
NECTIN3-204ENST00000478327 TOP2BQ02880 1626 aa0.71□□□□□ -2.3
NECTIN3-204ENST00000478327 NCMAPQ5T1S8 102 aa0.71□□□□□ -2.3
NECTIN3-204ENST00000478327 DPY30Q9C005 99 aa0.71□□□□□ -2.3
NECTIN3-204ENST00000478327 ABCC5O15440 1437 aa0.71□□□□□ -2.3
NECTIN3-204ENST00000478327 POLA1P09884 1462 aaPredicted RBP0.7□□□□□ -2.3
NECTIN3-204ENST00000478327 A0A0G2JND7 137 aa0.7□□□□□ -2.3
NECTIN3-204ENST00000478327 TRBV6-1A0A0K0K1D8 114 aa0.7□□□□□ -2.3
NECTIN3-204ENST00000478327 PMCHL1Q16048 86 aa0.7□□□□□ -2.3
NECTIN3-204ENST00000478327 SBF2Q86WG5 1849 aa0.7□□□□□ -2.3
NECTIN3-204ENST00000478327 ZNF469Q96JG9 3925 aaPredicted RBP0.7□□□□□ -2.3
NECTIN3-204ENST00000478327 RAPGEF6Q8TEU7 1601 aa0.7□□□□□ -2.3
NECTIN3-204ENST00000478327 TET3O43151 1660 aa0.69□□□□□ -2.3
NECTIN3-204ENST00000478327 ATOX1O00244 68 aa0.69□□□□□ -2.3
NECTIN3-204ENST00000478327 KRTAP2-3P0C7H8 128 aa0.69□□□□□ -2.3
NECTIN3-204ENST00000478327 COL5A1-AS1Q5SY13 56 aa0.69□□□□□ -2.3
NECTIN3-204ENST00000478327 C10orf113Q5VZT2 155 aa0.69□□□□□ -2.3
NECTIN3-204ENST00000478327 KRTAP2-4Q9BYR9 128 aa0.69□□□□□ -2.3
NECTIN3-204ENST00000478327 KRTAP2-1Q9BYU5 128 aa0.69□□□□□ -2.3
NECTIN3-204ENST00000478327 CACFD1Q9UGQ2 172 aa0.69□□□□□ -2.3
NECTIN3-204ENST00000478327 HMGXB3Q12766 1538 aa0.69□□□□□ -2.3
NECTIN3-204ENST00000478327 WNK3Q9BYP7 1800 aa0.68□□□□□ -2.3
NECTIN3-204ENST00000478327 KDM3BQ7LBC6 1761 aa0.68□□□□□ -2.3
NECTIN3-204ENST00000478327 MT-ATP8P03928 68 aa0.68□□□□□ -2.3
NECTIN3-204ENST00000478327 UQCRHP07919 91 aa0.68□□□□□ -2.3
NECTIN3-204ENST00000478327 FYCO1Q9BQS8 1478 aa0.67□□□□□ -2.3
NECTIN3-204ENST00000478327 PSMG4Q5JS54 123 aa0.67□□□□□ -2.3
NECTIN3-204ENST00000478327 ARHGEF12Q9NZN5 1544 aa0.67□□□□□ -2.3
NECTIN3-204ENST00000478327 MRC2Q9UBG0 1479 aa0.67□□□□□ -2.3
NECTIN3-204ENST00000478327 TTC28Q96AY4 2481 aa0.66□□□□□ -2.3
NECTIN3-204ENST00000478327 MPC2O95563 127 aa0.66□□□□□ -2.3
NECTIN3-204ENST00000478327 SPRR4Q96PI1 79 aa0.66□□□□□ -2.3
NECTIN3-204ENST00000478327 ARHGEF5Q12774 1597 aa0.66□□□□□ -2.3
NECTIN3-204ENST00000478327 AHNAK2Q8IVF2 5795 aa0.66□□□□□ -2.3
NECTIN3-204ENST00000478327 DIP2CQ9Y2E4 1556 aa0.66□□□□□ -2.3
NECTIN3-204ENST00000478327 TOPAZ1Q8N9V7 1692 aa0.65□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms