RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 CHTF8P0CG12 524 aa6.54□□□□□ -1.36
LCLAT1-209ENST00000478015 HNRNPA3P51991 378 aaKnown RBP6.54□□□□□ -1.36
LCLAT1-209ENST00000478015 TRAV8-4A0A0B4J246 113 aa6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 TRBV27A0A0K0K1C4 114 aa6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 LOC105371267A0A1B0GV96 52 aa6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 hDV102S1A0JD36 115 aa6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 PNRC1Q12796 327 aaPredicted RBP6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 DGAT2L7PQ6IED9 249 aa6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 RNASEKQ6P5S7 137 aaKnown RBP6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 SMIM15Q7Z3B0 74 aa6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 NAT8Q9UHE5 227 aa6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 COLCA2A8K830 154 aa6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 APCSP02743 223 aa6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 PMCHP20382 165 aa6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 CNBPP62633 177 aaKnown RBP6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 MRPL51Q4U2R6 128 aaKnown RBP6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 C14orf177Q52M58 125 aa6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 CHCHD10Q8WYQ3 142 aaPredicted RBP6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 FAM104AQ969W3 186 aa6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 LINC00526Q96FQ7 95 aa6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 ST20Q9HBF5 79 aa6.53□□□□□ -1.36
LCLAT1-209ENST00000478015 MT-ND4LP03901 98 aa6.52□□□□□ -1.37
LCLAT1-209ENST00000478015 CAMPP49913 170 aa6.52□□□□□ -1.37
LCLAT1-209ENST00000478015 FOXI1Q12951 378 aa6.52□□□□□ -1.37
LCLAT1-209ENST00000478015 HIGD2BQ4VC39 106 aa6.52□□□□□ -1.37
LCLAT1-209ENST00000478015 NAT8BQ9UHF3 227 aa6.52□□□□□ -1.37
LCLAT1-209ENST00000478015 RNASE13Q5GAN3 156 aaKnown RBP6.51□□□□□ -1.37
LCLAT1-209ENST00000478015 FAM104BQ5XKR9 115 aa6.51□□□□□ -1.37
LCLAT1-209ENST00000478015 AMMECR1LQ6DCA0 310 aa6.51□□□□□ -1.37
LCLAT1-209ENST00000478015 CDC42SE2Q9NRR3 84 aa6.51□□□□□ -1.37
LCLAT1-209ENST00000478015 A0A1B0GXF2 115 aa6.51□□□□□ -1.37
LCLAT1-209ENST00000478015 XCL1P47992 114 aa6.51□□□□□ -1.37
LCLAT1-209ENST00000478015 CIRBPQ14011 172 aaKnown RBP6.51□□□□□ -1.37
LCLAT1-209ENST00000478015 MRPL54Q6P161 138 aaKnown RBP6.51□□□□□ -1.37
LCLAT1-209ENST00000478015 BORCS7Q96B45 105 aa6.51□□□□□ -1.37
LCLAT1-209ENST00000478015 MRAP2Q96G30 205 aa6.51□□□□□ -1.37
LCLAT1-209ENST00000478015 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
LCLAT1-209ENST00000478015 SUMO2P61956 95 aaKnown RBP6.5□□□□□ -1.37
LCLAT1-209ENST00000478015 RIGQ13278 110 aa6.5□□□□□ -1.37
LCLAT1-209ENST00000478015 CTDSP1Q9GZU7 261 aa6.5□□□□□ -1.37
LCLAT1-209ENST00000478015 H7C423 109 aa6.49□□□□□ -1.37
LCLAT1-209ENST00000478015 PLA2G1BP04054 148 aaKnown RBP6.49□□□□□ -1.37
LCLAT1-209ENST00000478015 MRPL52Q86TS9 123 aaKnown RBP6.49□□□□□ -1.37
LCLAT1-209ENST00000478015 OR5A1Q8NGJ0 315 aa6.49□□□□□ -1.37
LCLAT1-209ENST00000478015 PRSS3P2Q8NHM4 247 aa6.49□□□□□ -1.37
LCLAT1-209ENST00000478015 C1orf196B1AJZ1 125 aa6.49□□□□□ -1.37
LCLAT1-209ENST00000478015 CCL25O15444 150 aa6.49□□□□□ -1.37
LCLAT1-209ENST00000478015 RAB5AP20339 215 aa6.49□□□□□ -1.37
LCLAT1-209ENST00000478015 COX6A2Q02221 97 aa6.49□□□□□ -1.37
LCLAT1-209ENST00000478015 OPRPNQ99935 248 aaPredicted RBP6.49□□□□□ -1.37
LCLAT1-209ENST00000478015 UBE2D4Q9Y2X8 147 aa6.49□□□□□ -1.37
LCLAT1-209ENST00000478015 HMCN2Q8NDA2 5059 aa6.48□□□□□ -1.37
LCLAT1-209ENST00000478015 TRBV24-1A0A075B6N3 115 aa6.48□□□□□ -1.37
LCLAT1-209ENST00000478015 NPYP01303 97 aa6.48□□□□□ -1.37
LCLAT1-209ENST00000478015 ZNF25P17030 456 aaPredicted RBP6.48□□□□□ -1.37
LCLAT1-209ENST00000478015 RPL39P62891 51 aaKnown RBP6.48□□□□□ -1.37
LCLAT1-209ENST00000478015 ZNF664Q8N3J9 261 aa6.48□□□□□ -1.37
LCLAT1-209ENST00000478015 YPEL4Q96NS1 127 aa6.48□□□□□ -1.37
LCLAT1-209ENST00000478015 A0A087WYN8 130 aa6.47□□□□□ -1.37
LCLAT1-209ENST00000478015 GVQW2A0A096LPI5 108 aaPredicted RBP6.47□□□□□ -1.37
LCLAT1-209ENST00000478015 D6R8Y8 96 aa6.47□□□□□ -1.37
LCLAT1-209ENST00000478015 VCYO14598 125 aa6.47□□□□□ -1.37
LCLAT1-209ENST00000478015 TNFRSF6BO95407 300 aa6.47□□□□□ -1.37
LCLAT1-209ENST00000478015 RAB5BP61020 215 aa6.47□□□□□ -1.37
LCLAT1-209ENST00000478015 ANAPC16Q96DE5 110 aa6.47□□□□□ -1.37
LCLAT1-209ENST00000478015 Q6ZUT4 128 aa6.47□□□□□ -1.37
LCLAT1-209ENST00000478015 SPACA4Q8TDM5 124 aa6.47□□□□□ -1.37
LCLAT1-209ENST00000478015 CKS2P33552 79 aa6.46□□□□□ -1.38
LCLAT1-209ENST00000478015 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
LCLAT1-209ENST00000478015 PPP1R2P9O14990 202 aa6.45□□□□□ -1.38
LCLAT1-209ENST00000478015 TCAPO15273 167 aa6.45□□□□□ -1.38
LCLAT1-209ENST00000478015 S100PP25815 95 aa6.45□□□□□ -1.38
LCLAT1-209ENST00000478015 HBBP68871 147 aa6.45□□□□□ -1.38
LCLAT1-209ENST00000478015 TNXBP22105 4242 aa6.45□□□□□ -1.38
LCLAT1-209ENST00000478015 IGHV3-64A0A075B6Q5 118 aa6.45□□□□□ -1.38
LCLAT1-209ENST00000478015 A0A096LNI7 61 aa6.45□□□□□ -1.38
LCLAT1-209ENST00000478015 FCER1GP30273 86 aa6.45□□□□□ -1.38
LCLAT1-209ENST00000478015 TMEM101Q96IK0 257 aa6.45□□□□□ -1.38
LCLAT1-209ENST00000478015 BTF3L4Q96K17 158 aa6.45□□□□□ -1.38
LCLAT1-209ENST00000478015 CSDC2Q9Y534 153 aaKnown RBP6.45□□□□□ -1.38
LCLAT1-209ENST00000478015 TGIF2-C20orf24A0A0A6YYL0 155 aa6.44□□□□□ -1.38
LCLAT1-209ENST00000478015 TRAV13-1A0A0B4J241 112 aa6.44□□□□□ -1.38
LCLAT1-209ENST00000478015 IGKV2-24A0A0C4DH68 120 aa6.44□□□□□ -1.38
LCLAT1-209ENST00000478015 RPL37AP61513 92 aaKnown RBP6.44□□□□□ -1.38
LCLAT1-209ENST00000478015 CD164L2Q6UWJ8 174 aa6.44□□□□□ -1.38
LCLAT1-209ENST00000478015 KIR2DL4Q99706 377 aa6.44□□□□□ -1.38
LCLAT1-209ENST00000478015 C20orf78Q9BR46 151 aa6.44□□□□□ -1.38
LCLAT1-209ENST00000478015 SMIM2Q9BVW6 85 aa6.44□□□□□ -1.38
LCLAT1-209ENST00000478015 AP5S1Q9NUS5 200 aa6.44□□□□□ -1.38
LCLAT1-209ENST00000478015 UBR4Q5T4S7 5183 aa6.44□□□□□ -1.38
LCLAT1-209ENST00000478015 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.43□□□□□ -1.38
LCLAT1-209ENST00000478015 S100A6P06703 90 aa6.43□□□□□ -1.38
LCLAT1-209ENST00000478015 PLAC8Q9NZF1 115 aa6.43□□□□□ -1.38
LCLAT1-209ENST00000478015 A0A1B0GW15 77 aa6.43□□□□□ -1.38
LCLAT1-209ENST00000478015 RPL32P62910 135 aaKnown RBP6.43□□□□□ -1.38
LCLAT1-209ENST00000478015 C5orf38Q86SI9 138 aa6.43□□□□□ -1.38
LCLAT1-209ENST00000478015 J3QL48 77 aa6.42□□□□□ -1.38
LCLAT1-209ENST00000478015 PPP1R17O96001 155 aa6.42□□□□□ -1.38
LCLAT1-209ENST00000478015 SS18Q15532 418 aa6.42□□□□□ -1.38
LCLAT1-209ENST00000478015 CFAP161Q6P656 301 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms