RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 CFC1BP0CG36 223 aa4.29□□□□□ -1.72
PTPRN-214ENST00000477819 UBE2G2P60604 165 aa4.29□□□□□ -1.72
PTPRN-214ENST00000477819 UBE2BP63146 152 aa4.29□□□□□ -1.72
PTPRN-214ENST00000477819 COTL1Q14019 142 aa4.29□□□□□ -1.72
PTPRN-214ENST00000477819 KRTAP13-2Q52LG2 175 aa4.29□□□□□ -1.72
PTPRN-214ENST00000477819 TRIQKQ629K1 86 aa4.29□□□□□ -1.72
PTPRN-214ENST00000477819 BCL2L11O43521 198 aa4.28□□□□□ -1.72
PTPRN-214ENST00000477819 TSHBP01222 138 aa4.28□□□□□ -1.72
PTPRN-214ENST00000477819 RASL11AQ6T310 242 aa4.28□□□□□ -1.72
PTPRN-214ENST00000477819 LINC00337Q8N6G1 96 aa4.28□□□□□ -1.72
PTPRN-214ENST00000477819 TSKUQ8WUA8 353 aa4.28□□□□□ -1.72
PTPRN-214ENST00000477819 AP1S3Q96PC3 154 aa4.28□□□□□ -1.72
PTPRN-214ENST00000477819 TMEM167BQ9NRX6 74 aa4.28□□□□□ -1.72
PTPRN-214ENST00000477819 ZFP30Q9Y2G7 519 aa4.28□□□□□ -1.72
PTPRN-214ENST00000477819 HSPB11Q9Y547 144 aa4.28□□□□□ -1.72
PTPRN-214ENST00000477819 A0A1W2PRE2 83 aa4.27□□□□□ -1.73
PTPRN-214ENST00000477819 CENPXA8MT69 81 aa4.27□□□□□ -1.73
PTPRN-214ENST00000477819 OR5AL1P0C617 328 aa4.27□□□□□ -1.73
PTPRN-214ENST00000477819 CD164L2Q6UWJ8 174 aa4.27□□□□□ -1.73
PTPRN-214ENST00000477819 LINC00304Q8N9R0 145 aa4.27□□□□□ -1.73
PTPRN-214ENST00000477819 MED28Q9H204 178 aa4.27□□□□□ -1.73
PTPRN-214ENST00000477819 NIT2Q9NQR4 276 aa4.27□□□□□ -1.73
PTPRN-214ENST00000477819 M0QXV9 152 aa4.26□□□□□ -1.73
PTPRN-214ENST00000477819 PLA2G10O15496 165 aa4.26□□□□□ -1.73
PTPRN-214ENST00000477819 CXorf1O96002 111 aa4.26□□□□□ -1.73
PTPRN-214ENST00000477819 NTF3P20783 257 aa4.26□□□□□ -1.73
PTPRN-214ENST00000477819 DEFA1P59665 94 aa4.26□□□□□ -1.73
PTPRN-214ENST00000477819 GAGE2EQ4V326 116 aa4.26□□□□□ -1.73
PTPRN-214ENST00000477819 NUDT15Q9NV35 164 aa4.26□□□□□ -1.73
PTPRN-214ENST00000477819 GAGE2DQ9UEU5 116 aa4.26□□□□□ -1.73
PTPRN-214ENST00000477819 C19orf71A6NCJ1 209 aa4.25□□□□□ -1.73
PTPRN-214ENST00000477819 LTAP01374 205 aa4.25□□□□□ -1.73
PTPRN-214ENST00000477819 S100A5P33763 92 aa4.25□□□□□ -1.73
PTPRN-214ENST00000477819 SEC61BP60468 96 aaKnown RBP4.25□□□□□ -1.73
PTPRN-214ENST00000477819 UBE2G1P62253 170 aa4.25□□□□□ -1.73
PTPRN-214ENST00000477819 SS18Q15532 418 aa4.25□□□□□ -1.73
PTPRN-214ENST00000477819 CNPY1Q3B7I2 92 aa4.25□□□□□ -1.73
PTPRN-214ENST00000477819 KRTAP13-3Q3SY46 172 aa4.25□□□□□ -1.73
PTPRN-214ENST00000477819 C10orf25Q5T742 122 aa4.25□□□□□ -1.73
PTPRN-214ENST00000477819 HIST1H2BAQ96A08 127 aa4.25□□□□□ -1.73
PTPRN-214ENST00000477819 FMC1Q96HJ9 113 aa4.25□□□□□ -1.73
PTPRN-214ENST00000477819 C2orf48Q96LS8 159 aa4.25□□□□□ -1.73
PTPRN-214ENST00000477819 TPPP3Q9BW30 176 aa4.25□□□□□ -1.73
PTPRN-214ENST00000477819 FAM74A7A6NL05 159 aa4.24□□□□□ -1.73
PTPRN-214ENST00000477819 COX7A2LO14548 114 aa4.24□□□□□ -1.73
PTPRN-214ENST00000477819 CXCL1P09341 107 aa4.24□□□□□ -1.73
PTPRN-214ENST00000477819 ESDP10768 282 aa4.24□□□□□ -1.73
PTPRN-214ENST00000477819 FAM210AQ96ND0 272 aa4.24□□□□□ -1.73
PTPRN-214ENST00000477819 CHTOPQ9Y3Y2 248 aaKnown RBP4.24□□□□□ -1.73
PTPRN-214ENST00000477819 XKRY2A2RUG3 117 aa4.23□□□□□ -1.73
PTPRN-214ENST00000477819 LYRM1O43325 122 aa4.23□□□□□ -1.73
PTPRN-214ENST00000477819 APCSP02743 223 aa4.23□□□□□ -1.73
PTPRN-214ENST00000477819 IL7P13232 177 aa4.23□□□□□ -1.73
PTPRN-214ENST00000477819 ATP6V0CP27449 155 aa4.23□□□□□ -1.73
PTPRN-214ENST00000477819 SPAG11BQ08648 103 aa4.23□□□□□ -1.73
PTPRN-214ENST00000477819 C5orf38Q86SI9 138 aa4.23□□□□□ -1.73
PTPRN-214ENST00000477819 TMEM101Q96IK0 257 aa4.23□□□□□ -1.73
PTPRN-214ENST00000477819 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
PTPRN-214ENST00000477819 H7C423 109 aa4.22□□□□□ -1.73
PTPRN-214ENST00000477819 ZNF726P1Q15940 193 aa4.22□□□□□ -1.73
PTPRN-214ENST00000477819 UNQ6190/PRO20217Q6UXQ8 127 aa4.22□□□□□ -1.73
PTPRN-214ENST00000477819 GATD1Q8NB37 220 aa4.22□□□□□ -1.73
PTPRN-214ENST00000477819 PPP1R1CQ8WVI7 109 aa4.22□□□□□ -1.73
PTPRN-214ENST00000477819 RPL39LQ96EH5 51 aaKnown RBP4.22□□□□□ -1.73
PTPRN-214ENST00000477819 BTF3L4Q96K17 158 aa4.22□□□□□ -1.73
PTPRN-214ENST00000477819 IMMP2LQ96T52 175 aa4.22□□□□□ -1.73
PTPRN-214ENST00000477819 ACTR3CQ9C0K3 210 aaPredicted RBP4.22□□□□□ -1.73
PTPRN-214ENST00000477819 CCDC160A6NGH7 325 aa4.21□□□□□ -1.74
PTPRN-214ENST00000477819 INMT-MINDY4F8WBC2 141 aa4.21□□□□□ -1.74
PTPRN-214ENST00000477819 G3V3Q6 166 aa4.21□□□□□ -1.74
PTPRN-214ENST00000477819 M0R2T5 61 aa4.21□□□□□ -1.74
PTPRN-214ENST00000477819 S100A9P06702 114 aaKnown RBP4.21□□□□□ -1.74
PTPRN-214ENST00000477819 NPSP0C0P6 89 aa4.21□□□□□ -1.74
PTPRN-214ENST00000477819 ZNF25P17030 456 aaPredicted RBP4.21□□□□□ -1.74
PTPRN-214ENST00000477819 AKR1C3P42330 323 aa4.21□□□□□ -1.74
PTPRN-214ENST00000477819 H2BFSP57053 126 aa4.21□□□□□ -1.74
PTPRN-214ENST00000477819 RNASE13Q5GAN3 156 aaKnown RBP4.21□□□□□ -1.74
PTPRN-214ENST00000477819 C9orf129Q5T035 196 aaKnown RBP4.21□□□□□ -1.74
PTPRN-214ENST00000477819 LINC00242Q5T6M2 205 aa4.21□□□□□ -1.74
PTPRN-214ENST00000477819 OR2D3Q8NGH3 330 aa4.21□□□□□ -1.74
PTPRN-214ENST00000477819 SMDT1Q9H4I9 107 aa4.21□□□□□ -1.74
PTPRN-214ENST00000477819 CDC42SE2Q9NRR3 84 aa4.21□□□□□ -1.74
PTPRN-214ENST00000477819 MRPL35Q9NZE8 188 aaKnown RBP4.21□□□□□ -1.74
PTPRN-214ENST00000477819 C6orf48Q9UBA6 75 aa4.21□□□□□ -1.74
PTPRN-214ENST00000477819 MACF1Q9UPN3 7388 aaKnown RBP4.21□□□□□ -1.74
PTPRN-214ENST00000477819 MPC2O95563 127 aa4.2□□□□□ -1.74
PTPRN-214ENST00000477819 NCR2O95944 276 aa4.2□□□□□ -1.74
PTPRN-214ENST00000477819 TLX1NBP0CAT3 122 aa4.2□□□□□ -1.74
PTPRN-214ENST00000477819 IGLC6P0CF74 106 aa4.2□□□□□ -1.74
PTPRN-214ENST00000477819 TAGLN2P37802 199 aaKnown RBP4.2□□□□□ -1.74
PTPRN-214ENST00000477819 RPL28P46779 137 aaKnown RBP4.2□□□□□ -1.74
PTPRN-214ENST00000477819 TRAV13-1A0A0B4J241 112 aa4.19□□□□□ -1.74
PTPRN-214ENST00000477819 C1orf196B1AJZ1 125 aa4.19□□□□□ -1.74
PTPRN-214ENST00000477819 F8WDY8 70 aa4.19□□□□□ -1.74
PTPRN-214ENST00000477819 NUPR1O60356 82 aa4.19□□□□□ -1.74
PTPRN-214ENST00000477819 MBP02144 154 aa4.19□□□□□ -1.74
PTPRN-214ENST00000477819 VPREB1P12018 145 aa4.19□□□□□ -1.74
PTPRN-214ENST00000477819 BAGE2Q86Y30 109 aa4.19□□□□□ -1.74
PTPRN-214ENST00000477819 PSMG3Q9BT73 122 aaPredicted RBP4.19□□□□□ -1.74
PTPRN-214ENST00000477819 NKX6-2Q9C056 277 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms