RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 RPL39P62891 51 aaKnown RBP11.83□□□□□ -0.52
EPHB4-204ENST00000477446 OR4C5Q8NGB2 326 aa11.83□□□□□ -0.52
EPHB4-204ENST00000477446 IGHV3-73A0A0B4J1V6 119 aa11.82□□□□□ -0.52
EPHB4-204ENST00000477446 NUPR2A6NF83 97 aa11.82□□□□□ -0.52
EPHB4-204ENST00000477446 E9PLD3 99 aa11.82□□□□□ -0.52
EPHB4-204ENST00000477446 C3orf84H3BNL1 204 aa11.82□□□□□ -0.52
EPHB4-204ENST00000477446 HERVK_113P61574 105 aa11.82□□□□□ -0.52
EPHB4-204ENST00000477446 COX11Q9Y6N1 276 aa11.82□□□□□ -0.52
EPHB4-204ENST00000477446 A6NDN8 102 aa11.81□□□□□ -0.52
EPHB4-204ENST00000477446 TRBV10-1A0A0K0K1A3 114 aa11.8□□□□□ -0.52
EPHB4-204ENST00000477446 FHL2Q14192 279 aa11.8□□□□□ -0.52
EPHB4-204ENST00000477446 TAL2Q16559 108 aa11.8□□□□□ -0.52
EPHB4-204ENST00000477446 CASC10Q5T4H9 136 aa11.8□□□□□ -0.52
EPHB4-204ENST00000477446 TCTAP57738 103 aa11.79□□□□□ -0.52
EPHB4-204ENST00000477446 TRBV25-1A0A075B6N4 114 aa11.79□□□□□ -0.52
EPHB4-204ENST00000477446 TRGV4A0A0C4DH28 118 aa11.79□□□□□ -0.52
EPHB4-204ENST00000477446 C11orf86A6NJI1 115 aa11.79□□□□□ -0.52
EPHB4-204ENST00000477446 IGLL5B9A064 214 aa11.79□□□□□ -0.52
EPHB4-204ENST00000477446 Q6ZSN1 163 aa11.79□□□□□ -0.52
EPHB4-204ENST00000477446 NFE4Q86UQ8 179 aa11.79□□□□□ -0.52
EPHB4-204ENST00000477446 KLK5Q9Y337 293 aaPredicted RBP11.79□□□□□ -0.52
EPHB4-204ENST00000477446 STARD9Q9P2P6 4700 aa11.78□□□□□ -0.52
EPHB4-204ENST00000477446 IGLV4-69A0A075B6H9 119 aa11.78□□□□□ -0.52
EPHB4-204ENST00000477446 VCX2Q9H322 139 aa11.78□□□□□ -0.52
EPHB4-204ENST00000477446 SPANXA1Q9NS26 97 aa11.78□□□□□ -0.52
EPHB4-204ENST00000477446 TRAV8-6A0A0B4J262 113 aa11.77□□□□□ -0.53
EPHB4-204ENST00000477446 MYMXA0A1B0GTQ4 84 aa11.77□□□□□ -0.53
EPHB4-204ENST00000477446 COTL1Q14019 142 aa11.77□□□□□ -0.53
EPHB4-204ENST00000477446 TRAV26-1A0A087WT03 109 aa11.76□□□□□ -0.53
EPHB4-204ENST00000477446 TAX1BP3O14907 124 aa11.76□□□□□ -0.53
EPHB4-204ENST00000477446 CHAC1Q9BUX1 264 aa11.76□□□□□ -0.53
EPHB4-204ENST00000477446 PRO0255Q9UI72 69 aa11.76□□□□□ -0.53
EPHB4-204ENST00000477446 IGLV4-3A0A075B6K6 122 aa11.75□□□□□ -0.53
EPHB4-204ENST00000477446 A0A0J9YY99 117 aa11.75□□□□□ -0.53
EPHB4-204ENST00000477446 H3BRM9 83 aa11.75□□□□□ -0.53
EPHB4-204ENST00000477446 PRADC1Q9BSG0 188 aa11.75□□□□□ -0.53
EPHB4-204ENST00000477446 TRBV7-3A0A075B6L6 115 aa11.75□□□□□ -0.53
EPHB4-204ENST00000477446 RPL36AP83881 106 aaKnown RBP11.75□□□□□ -0.53
EPHB4-204ENST00000477446 MAPKAPK5-AS1Q8N8E1 139 aa11.75□□□□□ -0.53
EPHB4-204ENST00000477446 DEFB104AQ8WTQ1 72 aa11.75□□□□□ -0.53
EPHB4-204ENST00000477446 RPL36ALQ969Q0 106 aaKnown RBP11.75□□□□□ -0.53
EPHB4-204ENST00000477446 VSIG2Q96IQ7 327 aa11.75□□□□□ -0.53
EPHB4-204ENST00000477446 K7EQD1 137 aa11.74□□□□□ -0.53
EPHB4-204ENST00000477446 SMAGPQ0VAQ4 97 aa11.74□□□□□ -0.53
EPHB4-204ENST00000477446 DAZ4Q86SG3 579 aaKnown RBP11.74□□□□□ -0.53
EPHB4-204ENST00000477446 AMELXQ99217 191 aa11.74□□□□□ -0.53
EPHB4-204ENST00000477446 CHCHD7Q9BUK0 85 aa11.74□□□□□ -0.53
EPHB4-204ENST00000477446 TIMM21Q9BVV7 248 aa11.74□□□□□ -0.53
EPHB4-204ENST00000477446 TM2D2Q9BX73 214 aa11.74□□□□□ -0.53
EPHB4-204ENST00000477446 DAZ3Q9NR90 486 aaKnown RBP11.74□□□□□ -0.53
EPHB4-204ENST00000477446 TENM2Q9NT68 2774 aa11.73□□□□□ -0.53
EPHB4-204ENST00000477446 PAX4O43316 350 aa11.73□□□□□ -0.53
EPHB4-204ENST00000477446 SLC25A29Q8N8R3 303 aa11.73□□□□□ -0.53
EPHB4-204ENST00000477446 TTTY13Q9BZ97 58 aa11.73□□□□□ -0.53
EPHB4-204ENST00000477446 APLNQ9ULZ1 77 aa11.73□□□□□ -0.53
EPHB4-204ENST00000477446 DYNC2H1Q8NCM8 4307 aaKnown RBP11.73□□□□□ -0.53
EPHB4-204ENST00000477446 H3BNG1 76 aa11.72□□□□□ -0.53
EPHB4-204ENST00000477446 TMEM170BQ5T4T1 132 aa11.72□□□□□ -0.53
EPHB4-204ENST00000477446 TRBV6-4A0A1B0GX49 114 aa11.71□□□□□ -0.53
EPHB4-204ENST00000477446 CEND1Q8N111 149 aa11.71□□□□□ -0.53
EPHB4-204ENST00000477446 ZNRF2Q8NHG8 242 aa11.71□□□□□ -0.53
EPHB4-204ENST00000477446 MRPS36P82909 103 aaKnown RBP11.71□□□□□ -0.54
EPHB4-204ENST00000477446 UBE2V1Q13404 147 aa11.71□□□□□ -0.54
EPHB4-204ENST00000477446 C15orf53Q8NAA6 179 aa11.71□□□□□ -0.54
EPHB4-204ENST00000477446 UBE2D4Q9Y2X8 147 aa11.71□□□□□ -0.54
EPHB4-204ENST00000477446 SMIM13P0DJ93 91 aa11.7□□□□□ -0.54
EPHB4-204ENST00000477446 GCSHP23434 173 aa11.7□□□□□ -0.54
EPHB4-204ENST00000477446 OPRPNQ99935 248 aaPredicted RBP11.7□□□□□ -0.54
EPHB4-204ENST00000477446 LOC100131303A0A0U1RQF7 123 aa11.69□□□□□ -0.54
EPHB4-204ENST00000477446 ZNF815PA8K554 130 aa11.69□□□□□ -0.54
EPHB4-204ENST00000477446 GYPEP15421 78 aa11.69□□□□□ -0.54
EPHB4-204ENST00000477446 VAMP3Q15836 100 aa11.69□□□□□ -0.54
EPHB4-204ENST00000477446 Q9UF83 564 aa11.69□□□□□ -0.54
EPHB4-204ENST00000477446 TMEM223A0PJW6 202 aa11.68□□□□□ -0.54
EPHB4-204ENST00000477446 C9orf118A6NHY6 69 aa11.68□□□□□ -0.54
EPHB4-204ENST00000477446 LEPROTO15243 131 aa11.68□□□□□ -0.54
EPHB4-204ENST00000477446 PTTG1IPP53801 180 aa11.68□□□□□ -0.54
EPHB4-204ENST00000477446 UBE2D3P61077 147 aa11.68□□□□□ -0.54
EPHB4-204ENST00000477446 UBE2D2P62837 147 aa11.68□□□□□ -0.54
EPHB4-204ENST00000477446 PLEKHB2Q96CS7 222 aa11.68□□□□□ -0.54
EPHB4-204ENST00000477446 HIST1H4GQ99525 98 aa11.68□□□□□ -0.54
EPHB4-204ENST00000477446 GTSF1LQ9H1H1 148 aa11.68□□□□□ -0.54
EPHB4-204ENST00000477446 CSDC2Q9Y534 153 aaKnown RBP11.68□□□□□ -0.54
EPHB4-204ENST00000477446 A0A096LPF7 62 aa11.67□□□□□ -0.54
EPHB4-204ENST00000477446 ICOSQ9Y6W8 199 aa11.67□□□□□ -0.54
EPHB4-204ENST00000477446 PLECQ15149 4684 aaKnown RBP11.67□□□□□ -0.54
EPHB4-204ENST00000477446 TINCRA0A1B0GVN0 87 aa11.67□□□□□ -0.54
EPHB4-204ENST00000477446 ZNF22P17026 224 aaPredicted RBP11.67□□□□□ -0.54
EPHB4-204ENST00000477446 DGAT2L7PQ6IED9 249 aa11.67□□□□□ -0.54
EPHB4-204ENST00000477446 SCGB1D4Q6XE38 83 aa11.67□□□□□ -0.54
EPHB4-204ENST00000477446 FAM104AQ969W3 186 aa11.67□□□□□ -0.54
EPHB4-204ENST00000477446 IGHV3-38A0A0C4DH36 116 aa11.66□□□□□ -0.54
EPHB4-204ENST00000477446 A0A0J9YXV3 536 aa11.66□□□□□ -0.54
EPHB4-204ENST00000477446 J3QQQ9 107 aa11.66□□□□□ -0.54
EPHB4-204ENST00000477446 LGALS3P17931 250 aaKnown RBP11.66□□□□□ -0.54
EPHB4-204ENST00000477446 MRPL23Q16540 153 aaKnown RBP11.66□□□□□ -0.54
EPHB4-204ENST00000477446 Q6ZVH6 145 aa11.66□□□□□ -0.54
EPHB4-204ENST00000477446 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.65□□□□□ -0.54
EPHB4-204ENST00000477446 IGKV2-29A2NJV5 120 aaPredicted RBP11.65□□□□□ -0.54
EPHB4-204ENST00000477446 H7C423 109 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms