RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 PRR15LQ9BU68 103 aa13.85□□□□□ -0.19
VARS2-209ENST00000477288 PCDH15Q96QU1 1955 aa13.85□□□□□ -0.19
VARS2-209ENST00000477288 A0A0U1RQV1 116 aa13.85□□□□□ -0.19
VARS2-209ENST00000477288 LINC00526Q96FQ7 95 aa13.85□□□□□ -0.19
VARS2-209ENST00000477288 BBC3Q96PG8 261 aaPredicted RBP13.85□□□□□ -0.19
VARS2-209ENST00000477288 IGLV4-3A0A075B6K6 122 aa13.85□□□□□ -0.19
VARS2-209ENST00000477288 C22orf34Q6ZV56 151 aa13.84□□□□□ -0.19
VARS2-209ENST00000477288 LINC00308Q8TCZ7 52 aa13.84□□□□□ -0.19
VARS2-209ENST00000477288 LY6LH3BQJ8 138 aa13.84□□□□□ -0.19
VARS2-209ENST00000477288 SPANXB1Q9NS25 103 aaPredicted RBP13.84□□□□□ -0.19
VARS2-209ENST00000477288 UBE2D3P61077 147 aa13.84□□□□□ -0.19
VARS2-209ENST00000477288 WFDC13Q8IUB5 93 aa13.84□□□□□ -0.19
VARS2-209ENST00000477288 C6orf99Q4VX62 202 aa13.84□□□□□ -0.19
VARS2-209ENST00000477288 ZNF22P17026 224 aaPredicted RBP13.83□□□□□ -0.2
VARS2-209ENST00000477288 NDUFV3P56181 108 aaKnown RBP13.83□□□□□ -0.2
VARS2-209ENST00000477288 IBA57-AS1B1ANH7 110 aa13.83□□□□□ -0.2
VARS2-209ENST00000477288 IGHV4-30-4P0DP06 118 aa13.83□□□□□ -0.2
VARS2-209ENST00000477288 MYO18BQ8IUG5 2567 aa13.83□□□□□ -0.2
VARS2-209ENST00000477288 GDF5OSQ5U4N7 250 aa13.83□□□□□ -0.2
VARS2-209ENST00000477288 MT-ATP8P03928 68 aa13.82□□□□□ -0.2
VARS2-209ENST00000477288 OBSL1O75147 1896 aa13.82□□□□□ -0.2
VARS2-209ENST00000477288 A0A1B0GXF2 115 aa13.82□□□□□ -0.2
VARS2-209ENST00000477288 IGLV9-49A0A0B4J1Y8 123 aa13.81□□□□□ -0.2
VARS2-209ENST00000477288 MRPL55Q7Z7F7 128 aaKnown RBP13.81□□□□□ -0.2
VARS2-209ENST00000477288 TMEM131Q92545 1883 aa13.81□□□□□ -0.2
VARS2-209ENST00000477288 C1orf229Q6ZS94 237 aaPredicted RBP13.8□□□□□ -0.2
VARS2-209ENST00000477288 RPL37AP8A6NKH3 93 aa13.8□□□□□ -0.2
VARS2-209ENST00000477288 LINC00574Q9H8X3 128 aa13.8□□□□□ -0.2
VARS2-209ENST00000477288 IGLV2-8P01709 118 aa13.8□□□□□ -0.2
VARS2-209ENST00000477288 TRBV6-4A0A1B0GX49 114 aa13.79□□□□□ -0.2
VARS2-209ENST00000477288 PRR14LQ5THK1 2151 aa13.79□□□□□ -0.2
VARS2-209ENST00000477288 TRIAP1O43715 76 aa13.79□□□□□ -0.2
VARS2-209ENST00000477288 FAM240AA0A1B0GVK7 77 aa13.79□□□□□ -0.2
VARS2-209ENST00000477288 NDUFC2-KCTD14E9PQ53 114 aa13.79□□□□□ -0.2
VARS2-209ENST00000477288 PRR4Q16378 134 aa13.78□□□□□ -0.2
VARS2-209ENST00000477288 WFDC10AQ9H1F0 79 aa13.78□□□□□ -0.2
VARS2-209ENST00000477288 ZNF702PQ9H963 129 aa13.78□□□□□ -0.2
VARS2-209ENST00000477288 A8MZ25 164 aa13.78□□□□□ -0.2
VARS2-209ENST00000477288 KPRPQ5T749 579 aaPredicted RBP13.78□□□□□ -0.2
VARS2-209ENST00000477288 SERP1Q9Y6X1 66 aa13.78□□□□□ -0.2
VARS2-209ENST00000477288 SRCAPQ6ZRS2 3230 aa13.78□□□□□ -0.2
VARS2-209ENST00000477288 ZNF106Q9H2Y7 1883 aaKnown RBP13.78□□□□□ -0.2
VARS2-209ENST00000477288 ZNF706Q9Y5V0 76 aaPredicted RBP13.78□□□□□ -0.2
VARS2-209ENST00000477288 WNK1Q9H4A3 2382 aa13.78□□□□□ -0.2
VARS2-209ENST00000477288 UQCRQO14949 82 aa13.77□□□□□ -0.21
VARS2-209ENST00000477288 P0C879 139 aa13.77□□□□□ -0.21
VARS2-209ENST00000477288 TP73-AS1Q9UF72 201 aa13.77□□□□□ -0.21
VARS2-209ENST00000477288 SNURFQ9Y675 71 aa13.77□□□□□ -0.21
VARS2-209ENST00000477288 DENND4AQ7Z401 1863 aa13.77□□□□□ -0.21
VARS2-209ENST00000477288 DSCAML1Q8TD84 2053 aa13.77□□□□□ -0.21
VARS2-209ENST00000477288 M0QY20 66 aa13.77□□□□□ -0.21
VARS2-209ENST00000477288 LINC01006Q8NI28 216 aa13.77□□□□□ -0.21
VARS2-209ENST00000477288 C18orf65Q6ZTR6 163 aa13.76□□□□□ -0.21
VARS2-209ENST00000477288 IGF2RP11717 2491 aa13.76□□□□□ -0.21
VARS2-209ENST00000477288 ZFAND3Q9H8U3 227 aa13.76□□□□□ -0.21
VARS2-209ENST00000477288 ATP5EP2Q5VTU8 51 aa13.76□□□□□ -0.21
VARS2-209ENST00000477288 C11orf71Q6IPW1 123 aa13.76□□□□□ -0.21
VARS2-209ENST00000477288 CCDC168Q8NDH2 2452 aa13.76□□□□□ -0.21
VARS2-209ENST00000477288 C11orf1Q9H5F2 150 aa13.76□□□□□ -0.21
VARS2-209ENST00000477288 LOC100131303A0A0U1RQF7 123 aa13.75□□□□□ -0.21
VARS2-209ENST00000477288 BRWD1-AS2P59051 145 aa13.75□□□□□ -0.21
VARS2-209ENST00000477288 NAV2Q8IVL1 2488 aa13.75□□□□□ -0.21
VARS2-209ENST00000477288 MAPKAPK5-AS1Q8N8E1 139 aa13.75□□□□□ -0.21
VARS2-209ENST00000477288 CLUHP3Q96NS8 147 aa13.75□□□□□ -0.21
VARS2-209ENST00000477288 PSMG3-AS1Q96PY0 264 aa13.75□□□□□ -0.21
VARS2-209ENST00000477288 RETNQ9HD89 108 aa13.75□□□□□ -0.21
VARS2-209ENST00000477288 TRBV6-5A0A0K0K1A5 114 aa13.74□□□□□ -0.21
VARS2-209ENST00000477288 RBX1P62877 108 aa13.74□□□□□ -0.21
VARS2-209ENST00000477288 UBE2D2P62837 147 aa13.73□□□□□ -0.21
VARS2-209ENST00000477288 PLAC8L1A1L4L8 177 aa13.73□□□□□ -0.21
VARS2-209ENST00000477288 Q6ZQY7 126 aa13.73□□□□□ -0.21
VARS2-209ENST00000477288 EBI3Q14213 229 aa13.72□□□□□ -0.21
VARS2-209ENST00000477288 Q8N9L7 120 aa13.72□□□□□ -0.21
VARS2-209ENST00000477288 M0R378 163 aa13.72□□□□□ -0.21
VARS2-209ENST00000477288 DHRS4-AS1Q9P1J3 65 aa13.72□□□□□ -0.21
VARS2-209ENST00000477288 NANOS2P60321 138 aaKnown RBP13.72□□□□□ -0.21
VARS2-209ENST00000477288 A6NED7 52 aa13.71□□□□□ -0.21
VARS2-209ENST00000477288 PIEZO2Q9H5I5 2752 aa13.71□□□□□ -0.22
VARS2-209ENST00000477288 IGLV4-69A0A075B6H9 119 aa13.7□□□□□ -0.22
VARS2-209ENST00000477288 FSTL3O95633 263 aa13.7□□□□□ -0.22
VARS2-209ENST00000477288 LOC107984640A0A0U1RRK4 108 aa13.7□□□□□ -0.22
VARS2-209ENST00000477288 FAM30AQ9NZY2 134 aa13.7□□□□□ -0.22
VARS2-209ENST00000477288 CD164L2Q6UWJ8 174 aa13.7□□□□□ -0.22
VARS2-209ENST00000477288 CRIP1P50238 77 aa13.69□□□□□ -0.22
VARS2-209ENST00000477288 TRBV30A0A0K0K1B3 111 aa13.69□□□□□ -0.22
VARS2-209ENST00000477288 MRPS12O15235 138 aaKnown RBP13.69□□□□□ -0.22
VARS2-209ENST00000477288 PRM2P04554 102 aa13.69□□□□□ -0.22
VARS2-209ENST00000477288 ARHGAP21Q5T5U3 1957 aa13.69□□□□□ -0.22
VARS2-209ENST00000477288 COL4A4P53420 1690 aaPredicted RBP13.68□□□□□ -0.22
VARS2-209ENST00000477288 OXLD1Q5BKU9 147 aa13.68□□□□□ -0.22
VARS2-209ENST00000477288 LELP1Q5T871 98 aa13.68□□□□□ -0.22
VARS2-209ENST00000477288 RNF185Q96GF1 192 aa13.68□□□□□ -0.22
VARS2-209ENST00000477288 PCNX3Q9H6A9 2034 aa13.68□□□□□ -0.22
VARS2-209ENST00000477288 KIAA1549LQ6ZVL6 1849 aa13.68□□□□□ -0.22
VARS2-209ENST00000477288 Q6ZPA2 131 aa13.68□□□□□ -0.22
VARS2-209ENST00000477288 FAM19A3Q7Z5A8 133 aa13.67□□□□□ -0.22
VARS2-209ENST00000477288 V9GYY9 64 aa13.67□□□□□ -0.22
VARS2-209ENST00000477288 MED12LQ86YW9 2145 aa13.67□□□□□ -0.22
VARS2-209ENST00000477288 LINC00959A0A1B0GUT2 108 aa13.66□□□□□ -0.22
VARS2-209ENST00000477288 PLA2G2AP14555 144 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms