RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 AMELXQ99217 191 aa10.02□□□□□ -0.81
COL4A6-206ENST00000477085 C2orf88Q9BSF0 95 aa10.02□□□□□ -0.81
COL4A6-206ENST00000477085 SPANXA1Q9NS26 97 aa10.02□□□□□ -0.81
COL4A6-206ENST00000477085 DPM2O94777 84 aa10.01□□□□□ -0.81
COL4A6-206ENST00000477085 IGKCP01834 107 aa10.01□□□□□ -0.81
COL4A6-206ENST00000477085 FGF6P10767 208 aa10.01□□□□□ -0.81
COL4A6-206ENST00000477085 Q6ZUT4 128 aa10.01□□□□□ -0.81
COL4A6-206ENST00000477085 TMEM243Q9BU79 118 aa10.01□□□□□ -0.81
COL4A6-206ENST00000477085 SNHG12Q9BXW3 62 aa10.01□□□□□ -0.81
COL4A6-206ENST00000477085 TRBV25-1A0A075B6N4 114 aa10.01□□□□□ -0.81
COL4A6-206ENST00000477085 ANKRD39Q53RE8 183 aa10.01□□□□□ -0.81
COL4A6-206ENST00000477085 B9D2Q9BPU9 175 aa10.01□□□□□ -0.81
COL4A6-206ENST00000477085 TIMM21Q9BVV7 248 aa10.01□□□□□ -0.81
COL4A6-206ENST00000477085 VCX2Q9H322 139 aa10□□□□□ -0.81
COL4A6-206ENST00000477085 M0R143 59 aa9.99□□□□□ -0.81
COL4A6-206ENST00000477085 NPSP0C0P6 89 aa9.99□□□□□ -0.81
COL4A6-206ENST00000477085 TCTAP57738 103 aa9.99□□□□□ -0.81
COL4A6-206ENST00000477085 MRPS36P82909 103 aaKnown RBP9.98□□□□□ -0.81
COL4A6-206ENST00000477085 GAGE6Q13070 117 aa9.98□□□□□ -0.81
COL4A6-206ENST00000477085 MRPL23Q16540 153 aaKnown RBP9.98□□□□□ -0.81
COL4A6-206ENST00000477085 TP73-AS1Q9UF72 201 aa9.98□□□□□ -0.81
COL4A6-206ENST00000477085 CSDC2Q9Y534 153 aaKnown RBP9.98□□□□□ -0.81
COL4A6-206ENST00000477085 PRKDCP78527 4128 aaKnown RBP9.98□□□□□ -0.81
COL4A6-206ENST00000477085 DEFB131BA0A096LNP1 70 aa9.98□□□□□ -0.81
COL4A6-206ENST00000477085 C11orf86A6NJI1 115 aa9.98□□□□□ -0.81
COL4A6-206ENST00000477085 PLNP26678 52 aa9.98□□□□□ -0.81
COL4A6-206ENST00000477085 HNRNPA3P51991 378 aaKnown RBP9.98□□□□□ -0.81
COL4A6-206ENST00000477085 CDC42SE2Q9NRR3 84 aa9.98□□□□□ -0.81
COL4A6-206ENST00000477085 ICOSQ9Y6W8 199 aa9.98□□□□□ -0.81
COL4A6-206ENST00000477085 HSBP1L1C9JCN9 74 aa9.97□□□□□ -0.81
COL4A6-206ENST00000477085 H7C423 109 aa9.97□□□□□ -0.81
COL4A6-206ENST00000477085 TMEM97Q5BJF2 176 aa9.97□□□□□ -0.81
COL4A6-206ENST00000477085 IGLV4-60A0A075B6I1 120 aa9.96□□□□□ -0.81
COL4A6-206ENST00000477085 IGKV2D-26A0A0A0MRZ7 120 aa9.96□□□□□ -0.81
COL4A6-206ENST00000477085 A0A0J9YXV3 536 aa9.96□□□□□ -0.81
COL4A6-206ENST00000477085 H3BNG1 76 aa9.96□□□□□ -0.81
COL4A6-206ENST00000477085 UBE2L6O14933 153 aa9.96□□□□□ -0.81
COL4A6-206ENST00000477085 CHCHD5Q9BSY4 110 aa9.96□□□□□ -0.81
COL4A6-206ENST00000477085 PAPPA-AS1Q5QFB9 102 aa9.96□□□□□ -0.82
COL4A6-206ENST00000477085 DGAT2L7PQ6IED9 249 aa9.96□□□□□ -0.82
COL4A6-206ENST00000477085 NFE4Q86UQ8 179 aa9.95□□□□□ -0.82
COL4A6-206ENST00000477085 UBE2D1P51668 147 aa9.94□□□□□ -0.82
COL4A6-206ENST00000477085 AMMECR1LQ6DCA0 310 aa9.94□□□□□ -0.82
COL4A6-206ENST00000477085 LYPD5Q6UWN5 251 aa9.94□□□□□ -0.82
COL4A6-206ENST00000477085 Q8N3U1 123 aa9.94□□□□□ -0.82
COL4A6-206ENST00000477085 OR5A1Q8NGJ0 315 aa9.94□□□□□ -0.82
COL4A6-206ENST00000477085 MRPS16Q9Y3D3 137 aaKnown RBP9.94□□□□□ -0.82
COL4A6-206ENST00000477085 A0A1B0GV90 55 aa9.93□□□□□ -0.82
COL4A6-206ENST00000477085 MPV17L2Q567V2 206 aa9.93□□□□□ -0.82
COL4A6-206ENST00000477085 ZNF22P17026 224 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-206ENST00000477085 ZNF25P17030 456 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-206ENST00000477085 RBX1P62877 108 aa9.92□□□□□ -0.82
COL4A6-206ENST00000477085 SLC25A34Q6PIV7 304 aa9.92□□□□□ -0.82
COL4A6-206ENST00000477085 SH2D6Q7Z4S9 175 aa9.92□□□□□ -0.82
COL4A6-206ENST00000477085 PCP2Q8IVA1 136 aa9.92□□□□□ -0.82
COL4A6-206ENST00000477085 CHAC1Q9BUX1 264 aa9.92□□□□□ -0.82
COL4A6-206ENST00000477085 TTTY13Q9BZ97 58 aa9.92□□□□□ -0.82
COL4A6-206ENST00000477085 STAB2Q8WWQ8 2551 aa9.92□□□□□ -0.82
COL4A6-206ENST00000477085 TRAV10A0A0B4J240 114 aa9.91□□□□□ -0.82
COL4A6-206ENST00000477085 TMEM262E9PQX1 116 aa9.91□□□□□ -0.82
COL4A6-206ENST00000477085 COX6A2Q02221 97 aa9.91□□□□□ -0.82
COL4A6-206ENST00000477085 LELP1Q5T871 98 aa9.91□□□□□ -0.82
COL4A6-206ENST00000477085 TMEM101Q96IK0 257 aa9.91□□□□□ -0.82
COL4A6-206ENST00000477085 A0A1B0GUV1 79 aa9.91□□□□□ -0.82
COL4A6-206ENST00000477085 TINCRA0A1B0GVN0 87 aa9.91□□□□□ -0.82
COL4A6-206ENST00000477085 COX8AP10176 69 aa9.91□□□□□ -0.82
COL4A6-206ENST00000477085 LINC00242Q5T6M2 205 aa9.91□□□□□ -0.82
COL4A6-206ENST00000477085 TRAV13-1A0A0B4J241 112 aa9.9□□□□□ -0.82
COL4A6-206ENST00000477085 NMUP48645 174 aa9.9□□□□□ -0.82
COL4A6-206ENST00000477085 ESRGQ1W209 222 aa9.9□□□□□ -0.82
COL4A6-206ENST00000477085 TMEM170BQ5T4T1 132 aa9.9□□□□□ -0.82
COL4A6-206ENST00000477085 SMAGPQ0VAQ4 97 aa9.89□□□□□ -0.83
COL4A6-206ENST00000477085 FAM19A3Q7Z5A8 133 aa9.89□□□□□ -0.83
COL4A6-206ENST00000477085 MAPKAPK5-AS1Q8N8E1 139 aa9.89□□□□□ -0.83
COL4A6-206ENST00000477085 TMEM223A0PJW6 202 aa9.88□□□□□ -0.83
COL4A6-206ENST00000477085 E9PLD3 99 aa9.88□□□□□ -0.83
COL4A6-206ENST00000477085 NHLRC4P0CG21 123 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-206ENST00000477085 TIRAPP58753 221 aa9.88□□□□□ -0.83
COL4A6-206ENST00000477085 BATFQ16520 125 aa9.88□□□□□ -0.83
COL4A6-206ENST00000477085 BOD1L2Q8IYS8 172 aa9.88□□□□□ -0.83
COL4A6-206ENST00000477085 DYNC2H1Q8NCM8 4307 aaKnown RBP9.87□□□□□ -0.83
COL4A6-206ENST00000477085 CDKN2A-AS1Q9UH64 79 aa9.87□□□□□ -0.83
COL4A6-206ENST00000477085 IGLV5-45A0A087WSX0 123 aa9.86□□□□□ -0.83
COL4A6-206ENST00000477085 IGKV3OR2-268A0A0C4DH90 116 aa9.86□□□□□ -0.83
COL4A6-206ENST00000477085 TSPEAR-AS2P59090 65 aa9.86□□□□□ -0.83
COL4A6-206ENST00000477085 CSMD3Q7Z407 3707 aa9.86□□□□□ -0.83
COL4A6-206ENST00000477085 TRAV8-6A0A0B4J262 113 aa9.86□□□□□ -0.83
COL4A6-206ENST00000477085 COL5A1-AS1Q5SY13 56 aa9.86□□□□□ -0.83
COL4A6-206ENST00000477085 C2orf91Q6ZV80 131 aa9.86□□□□□ -0.83
COL4A6-206ENST00000477085 WFDC10BQ8IUB3 73 aa9.86□□□□□ -0.83
COL4A6-206ENST00000477085 IGHV3-64A0A075B6Q5 118 aa9.85□□□□□ -0.83
COL4A6-206ENST00000477085 DLEU1O43261 78 aa9.85□□□□□ -0.83
COL4A6-206ENST00000477085 HINT1P49773 126 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-206ENST00000477085 TRAV8-3A0A0A6YYJ7 113 aa9.84□□□□□ -0.83
COL4A6-206ENST00000477085 LINC00959A0A1B0GUT2 108 aa9.84□□□□□ -0.83
COL4A6-206ENST00000477085 IGLL5B9A064 214 aa9.84□□□□□ -0.83
COL4A6-206ENST00000477085 CLPSL2Q6UWE3 100 aa9.84□□□□□ -0.83
COL4A6-206ENST00000477085 LINC00269Q8N2A0 174 aa9.84□□□□□ -0.83
COL4A6-206ENST00000477085 LINC00469Q8N7U9 141 aa9.84□□□□□ -0.83
COL4A6-206ENST00000477085 GEMIN7Q9H840 131 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms