RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 S100A4P26447 101 aaKnown RBP2.92□□□□□ -1.94
CD55-208ENST00000476590 PATE1Q8WXA2 126 aa2.92□□□□□ -1.94
CD55-208ENST00000476590 RP1P56715 2156 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 IGLV4-3A0A075B6K6 122 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 TRBV6-8A0A0A6YYG3 113 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 IGHV3-21A0A0B4J1V1 117 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 TRBV6-5A0A0K0K1A5 114 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 IGKV1-17P01599 117 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 CRPP02741 224 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 TFF1P04155 84 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 GNLYP22749 145 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 C17orf58Q2M2W7 97 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 LIMD2Q9BT23 127 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 TNCP24821 2201 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 PLXNB1O43157 2135 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 MED13Q9UHV7 2174 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 IGKV2-29A2NJV5 120 aaPredicted RBP2.91□□□□□ -1.94
CD55-208ENST00000476590 BPY2O14599 106 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 LECT2O14960 151 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 RPL27AP46776 148 aaKnown RBP2.91□□□□□ -1.94
CD55-208ENST00000476590 HAMPP81172 84 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 ODF3L2Q3SX64 289 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 PDE4DIPQ5VU43 2346 aa2.91□□□□□ -1.94
CD55-208ENST00000476590 IGHV3-20A0A0C4DH32 117 aa2.9□□□□□ -1.94
CD55-208ENST00000476590 IGHV3-64DA0A0J9YX35 117 aa2.9□□□□□ -1.94
CD55-208ENST00000476590 KLLNB2CW77 178 aa2.9□□□□□ -1.94
CD55-208ENST00000476590 I3L2K1 104 aa2.9□□□□□ -1.94
CD55-208ENST00000476590 KIAA0087Q14695 138 aa2.9□□□□□ -1.94
CD55-208ENST00000476590 CXCL17Q6UXB2 119 aa2.9□□□□□ -1.94
CD55-208ENST00000476590 C9orf47Q6ZRZ4 202 aa2.9□□□□□ -1.94
CD55-208ENST00000476590 LINC00337Q8N6G1 96 aa2.9□□□□□ -1.94
CD55-208ENST00000476590 C20orf203Q8NBC4 194 aa2.9□□□□□ -1.94
CD55-208ENST00000476590 CDC42SE1Q9NRR8 79 aa2.9□□□□□ -1.94
CD55-208ENST00000476590 DOCK10Q96BY6 2186 aa2.9□□□□□ -1.95
CD55-208ENST00000476590 TRBV10-1A0A0K0K1A3 114 aa2.9□□□□□ -1.95
CD55-208ENST00000476590 MRPL33O75394 65 aaKnown RBP2.9□□□□□ -1.95
CD55-208ENST00000476590 IGLV2-23P01705 113 aa2.9□□□□□ -1.95
CD55-208ENST00000476590 LPAL2Q16609 132 aa2.9□□□□□ -1.95
CD55-208ENST00000476590 LINC00167Q96N53 147 aa2.9□□□□□ -1.95
CD55-208ENST00000476590 DEC1Q9P2X7 70 aa2.9□□□□□ -1.95
CD55-208ENST00000476590 SVILO95425 2214 aa2.89□□□□□ -1.95
CD55-208ENST00000476590 IGLV3-12A0A075B6K2 115 aa2.89□□□□□ -1.95
CD55-208ENST00000476590 IGLV9-49A0A0B4J1Y8 123 aa2.89□□□□□ -1.95
CD55-208ENST00000476590 H0Y9J4 135 aa2.89□□□□□ -1.95
CD55-208ENST00000476590 K7EQG2 157 aa2.89□□□□□ -1.95
CD55-208ENST00000476590 IGHV3-9P01782 118 aa2.89□□□□□ -1.95
CD55-208ENST00000476590 RPL36AP83881 106 aaKnown RBP2.89□□□□□ -1.95
CD55-208ENST00000476590 MALRD1Q5VYJ5 2156 aa2.89□□□□□ -1.95
CD55-208ENST00000476590 SUMO4Q6EEV6 95 aa2.89□□□□□ -1.95
CD55-208ENST00000476590 FDCSPQ8NFU4 85 aa2.89□□□□□ -1.95
CD55-208ENST00000476590 SMIM11BQ8TCY0 68 aa2.89□□□□□ -1.95
CD55-208ENST00000476590 RPL36ALQ969Q0 106 aaKnown RBP2.89□□□□□ -1.95
CD55-208ENST00000476590 HIGD2AQ9BW72 106 aa2.89□□□□□ -1.95
CD55-208ENST00000476590 OCR1Q9BZK8 76 aa2.89□□□□□ -1.95
CD55-208ENST00000476590 CACNA1GO43497 2377 aa2.89□□□□□ -1.95
CD55-208ENST00000476590 LOC110117498A0A087WWA1 95 aa2.88□□□□□ -1.95
CD55-208ENST00000476590 A6NED7 52 aa2.88□□□□□ -1.95
CD55-208ENST00000476590 CDK2AP2O75956 126 aa2.88□□□□□ -1.95
CD55-208ENST00000476590 LINC00315P59091 139 aa2.88□□□□□ -1.95
CD55-208ENST00000476590 C9orf116Q5BN46 136 aaPredicted RBP2.88□□□□□ -1.95
CD55-208ENST00000476590 RNASE13Q5GAN3 156 aaKnown RBP2.88□□□□□ -1.95
CD55-208ENST00000476590 LINC00574Q9H8X3 128 aa2.88□□□□□ -1.95
CD55-208ENST00000476590 LENEPQ9Y5L5 61 aa2.88□□□□□ -1.95
CD55-208ENST00000476590 IGKV3D-15A0A087WSY6 115 aa2.88□□□□□ -1.95
CD55-208ENST00000476590 PRAC2D3DTV9 90 aa2.88□□□□□ -1.95
CD55-208ENST00000476590 PRM2P04554 102 aa2.88□□□□□ -1.95
CD55-208ENST00000476590 MRGPRG-AS1Q2M3A8 158 aa2.88□□□□□ -1.95
CD55-208ENST00000476590 IGFL4Q6B9Z1 124 aa2.88□□□□□ -1.95
CD55-208ENST00000476590 Q6ZQT0 140 aa2.88□□□□□ -1.95
CD55-208ENST00000476590 Q6ZTI0 123 aa2.88□□□□□ -1.95
CD55-208ENST00000476590 SRRM5B3KS81 715 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 PDE6GP18545 87 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 MOBPQ13875 183 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 C9orf106Q8NAJ2 232 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 PRR15LQ9BU68 103 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 NAV3Q8IVL0 2385 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 COL27A1Q8IZC6 1860 aaPredicted RBP2.87□□□□□ -1.95
CD55-208ENST00000476590 SDK2Q58EX2 2172 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 IGLV5-45A0A087WSX0 123 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 IGHV3-38A0A0C4DH36 116 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 C3orf84H3BNL1 204 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 K7EIM0 57 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 LY6HO94772 140 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 C18orf65Q6ZTR6 163 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 Q8N9P0 234 aaPredicted RBP2.87□□□□□ -1.95
CD55-208ENST00000476590 DEFB104AQ8WTQ1 72 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 CDC42SE2Q9NRR3 84 aa2.87□□□□□ -1.95
CD55-208ENST00000476590 GOLGB1Q14789 3259 aaKnown RBP2.87□□□□□ -1.95
CD55-208ENST00000476590 IGLV5-39A0A0G2JS06 123 aa2.86□□□□□ -1.95
CD55-208ENST00000476590 LCE6AA0A183 80 aa2.86□□□□□ -1.95
CD55-208ENST00000476590 LOC101927531A0A1B0GV80 90 aa2.86□□□□□ -1.95
CD55-208ENST00000476590 REG3AQ06141 175 aa2.86□□□□□ -1.95
CD55-208ENST00000476590 ZFHX3Q15911 3703 aa2.86□□□□□ -1.95
CD55-208ENST00000476590 CADP27708 2225 aa2.86□□□□□ -1.95
CD55-208ENST00000476590 SEC16AO15027 2179 aa2.86□□□□□ -1.95
CD55-208ENST00000476590 IGKV2-28A0A075B6P5 120 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 IGKV2D-28P01615 120 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 APELAP0DMC3 54 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 ASB16-AS1Q495Z4 193 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 C6orf99Q4VX62 202 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms