RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 TMEM170BQ5T4T1 132 aa16.19■□□□□ 0.18
CCDC7-206ENST00000476558 RNASE13Q5GAN3 156 aaKnown RBP16.19■□□□□ 0.18
CCDC7-206ENST00000476558 ZNF22P17026 224 aaPredicted RBP16.18■□□□□ 0.18
CCDC7-206ENST00000476558 HERVK_113P61574 105 aa16.18■□□□□ 0.18
CCDC7-206ENST00000476558 HSD52Q0P140 79 aa16.18■□□□□ 0.18
CCDC7-206ENST00000476558 MYMXA0A1B0GTQ4 84 aa16.17■□□□□ 0.18
CCDC7-206ENST00000476558 TMEM223A0PJW6 202 aa16.17■□□□□ 0.18
CCDC7-206ENST00000476558 PRO0255Q9UI72 69 aa16.17■□□□□ 0.18
CCDC7-206ENST00000476558 TMEM243Q9BU79 118 aa16.16■□□□□ 0.18
CCDC7-206ENST00000476558 COL6A5A8TX70 2615 aa16.16■□□□□ 0.18
CCDC7-206ENST00000476558 TINCRA0A1B0GVN0 87 aa16.15■□□□□ 0.18
CCDC7-206ENST00000476558 H7C423 109 aa16.15■□□□□ 0.18
CCDC7-206ENST00000476558 CELA1Q9UNI1 258 aa16.15■□□□□ 0.18
CCDC7-206ENST00000476558 UBE2D1P51668 147 aa16.15■□□□□ 0.18
CCDC7-206ENST00000476558 DGAT2L7PQ6IED9 249 aa16.15■□□□□ 0.18
CCDC7-206ENST00000476558 LURAP1LQ8IV03 231 aa16.15■□□□□ 0.18
CCDC7-206ENST00000476558 TRBV6-8A0A0A6YYG3 113 aa16.13■□□□□ 0.17
CCDC7-206ENST00000476558 GYPEP15421 78 aa16.13■□□□□ 0.17
CCDC7-206ENST00000476558 G3V4G9 280 aa16.12■□□□□ 0.17
CCDC7-206ENST00000476558 TSPEAR-AS2P59090 65 aa16.12■□□□□ 0.17
CCDC7-206ENST00000476558 DAD1P61803 113 aa16.12■□□□□ 0.17
CCDC7-206ENST00000476558 SMAGPQ0VAQ4 97 aa16.12■□□□□ 0.17
CCDC7-206ENST00000476558 DNAH3Q8TD57 4116 aa16.12■□□□□ 0.17
CCDC7-206ENST00000476558 SEC11AP67812 179 aa16.12■□□□□ 0.17
CCDC7-206ENST00000476558 ORAOV1Q8WV07 137 aa16.12■□□□□ 0.17
CCDC7-206ENST00000476558 CDC42SE2Q9NRR3 84 aa16.12■□□□□ 0.17
CCDC7-206ENST00000476558 SPART-AS1P0CW21 52 aa16.11■□□□□ 0.17
CCDC7-206ENST00000476558 FAM19A3Q7Z5A8 133 aa16.11■□□□□ 0.17
CCDC7-206ENST00000476558 ZNF815PA8K554 130 aa16.1■□□□□ 0.17
CCDC7-206ENST00000476558 LEPROTO15243 131 aa16.1■□□□□ 0.17
CCDC7-206ENST00000476558 SAMD5Q5TGI4 173 aa16.1■□□□□ 0.17
CCDC7-206ENST00000476558 J3QQQ9 107 aa16.09■□□□□ 0.17
CCDC7-206ENST00000476558 ZNF25P17030 456 aaPredicted RBP16.09■□□□□ 0.17
CCDC7-206ENST00000476558 TIRAPP58753 221 aa16.09■□□□□ 0.17
CCDC7-206ENST00000476558 ATP6V0E2Q8NHE4 81 aa16.09■□□□□ 0.17
CCDC7-206ENST00000476558 VSIG2Q96IQ7 327 aa16.09■□□□□ 0.17
CCDC7-206ENST00000476558 IGLV5-45A0A087WSX0 123 aa16.08■□□□□ 0.17
CCDC7-206ENST00000476558 UBE2L6O14933 153 aa16.08■□□□□ 0.17
CCDC7-206ENST00000476558 PAX4O43316 350 aa16.08■□□□□ 0.17
CCDC7-206ENST00000476558 TAL2Q16559 108 aa16.08■□□□□ 0.17
CCDC7-206ENST00000476558 OR5A1Q8NGJ0 315 aa16.08■□□□□ 0.17
CCDC7-206ENST00000476558 ATP5G1P05496 136 aa16.08■□□□□ 0.16
CCDC7-206ENST00000476558 TM2D2Q9BX73 214 aa16.07■□□□□ 0.16
CCDC7-206ENST00000476558 TAX1BP3O14907 124 aa16.06■□□□□ 0.16
CCDC7-206ENST00000476558 AMMECR1LQ6DCA0 310 aa16.06■□□□□ 0.16
CCDC7-206ENST00000476558 PLEKHB2Q96CS7 222 aa16.06■□□□□ 0.16
CCDC7-206ENST00000476558 LINC00242Q5T6M2 205 aa16.05■□□□□ 0.16
CCDC7-206ENST00000476558 CEND1Q8N111 149 aa16.05■□□□□ 0.16
CCDC7-206ENST00000476558 TMEM101Q96IK0 257 aa16.05■□□□□ 0.16
CCDC7-206ENST00000476558 Q6ZVH6 145 aa16.04■□□□□ 0.16
CCDC7-206ENST00000476558 GEMIN7Q9H840 131 aaKnown RBP16.04■□□□□ 0.16
CCDC7-206ENST00000476558 COX11Q9Y6N1 276 aa16.04■□□□□ 0.16
CCDC7-206ENST00000476558 TEX48A0A1B0GUV7 120 aa16.03■□□□□ 0.16
CCDC7-206ENST00000476558 COX6A2Q02221 97 aa16.03■□□□□ 0.16
CCDC7-206ENST00000476558 GAGE6Q13070 117 aa16.03■□□□□ 0.16
CCDC7-206ENST00000476558 RETNQ9HD89 108 aa16.03■□□□□ 0.16
CCDC7-206ENST00000476558 ANK2Q01484 3957 aa16.03■□□□□ 0.16
CCDC7-206ENST00000476558 IGHV1-58A0A0C4DH39 117 aa16.03■□□□□ 0.16
CCDC7-206ENST00000476558 A6NDN8 102 aa16.03■□□□□ 0.16
CCDC7-206ENST00000476558 IGHV3-30-3P0DP02 117 aa16.03■□□□□ 0.16
CCDC7-206ENST00000476558 LGALS3P17931 250 aaKnown RBP16.03■□□□□ 0.16
CCDC7-206ENST00000476558 FXYD2P54710 66 aa16.03■□□□□ 0.16
CCDC7-206ENST00000476558 LINC00469Q8N7U9 141 aa16.03■□□□□ 0.16
CCDC7-206ENST00000476558 CDKN2A-AS1Q9UH64 79 aa16.03■□□□□ 0.16
CCDC7-206ENST00000476558 A0A0J9YY99 117 aa16.02■□□□□ 0.16
CCDC7-206ENST00000476558 GCSHP23434 173 aa16.02■□□□□ 0.16
CCDC7-206ENST00000476558 IGHV3-64A0A075B6Q5 118 aa16.01■□□□□ 0.15
CCDC7-206ENST00000476558 HERVK_113P63121 156 aa16.01■□□□□ 0.15
CCDC7-206ENST00000476558 CHCHD5Q9BSY4 110 aa16.01■□□□□ 0.15
CCDC7-206ENST00000476558 TRAV8-3A0A0A6YYJ7 113 aa16.01■□□□□ 0.15
CCDC7-206ENST00000476558 K7EP13 123 aa16.01■□□□□ 0.15
CCDC7-206ENST00000476558 SCGB1D4Q6XE38 83 aa16.01■□□□□ 0.15
CCDC7-206ENST00000476558 HIST1H4GQ99525 98 aa16.01■□□□□ 0.15
CCDC7-206ENST00000476558 IGLV4-60A0A075B6I1 120 aa16■□□□□ 0.15
CCDC7-206ENST00000476558 TRAV26-1A0A087WT03 109 aa16■□□□□ 0.15
CCDC7-206ENST00000476558 F5H768 121 aa15.99■□□□□ 0.15
CCDC7-206ENST00000476558 C12orf74Q32Q52 190 aa15.99■□□□□ 0.15
CCDC7-206ENST00000476558 TRAV13-1A0A0B4J241 112 aa15.98■□□□□ 0.15
CCDC7-206ENST00000476558 SPINK8P0C7L1 97 aa15.98■□□□□ 0.15
CCDC7-206ENST00000476558 C11orf68Q9H3H3 251 aaKnown RBP15.98■□□□□ 0.15
CCDC7-206ENST00000476558 H3BRM9 83 aa15.97■□□□□ 0.15
CCDC7-206ENST00000476558 A0A096LPF7 62 aa15.96■□□□□ 0.15
CCDC7-206ENST00000476558 A0A1B0GUV1 79 aa15.96■□□□□ 0.15
CCDC7-206ENST00000476558 SPANXB1Q9NS25 103 aaPredicted RBP15.96■□□□□ 0.15
CCDC7-206ENST00000476558 IGLV5-39A0A0G2JS06 123 aa15.96■□□□□ 0.14
CCDC7-206ENST00000476558 C10orf126Q8N4M7 172 aa15.95■□□□□ 0.14
CCDC7-206ENST00000476558 HTN3P15516 51 aa15.94■□□□□ 0.14
CCDC7-206ENST00000476558 MRPL23Q16540 153 aaKnown RBP15.94■□□□□ 0.14
CCDC7-206ENST00000476558 PTTG1IPP53801 180 aa15.93■□□□□ 0.14
CCDC7-206ENST00000476558 NOTCH1P46531 2555 aa15.93■□□□□ 0.14
CCDC7-206ENST00000476558 ZFAND6Q6FIF0 208 aa15.92■□□□□ 0.14
CCDC7-206ENST00000476558 SMIM13P0DJ93 91 aa15.91■□□□□ 0.14
CCDC7-206ENST00000476558 RBX1P62877 108 aa15.91■□□□□ 0.14
CCDC7-206ENST00000476558 A0A0J9YXY3 114 aa15.91■□□□□ 0.14
CCDC7-206ENST00000476558 SMIM1B2RUZ4 78 aa15.91■□□□□ 0.14
CCDC7-206ENST00000476558 SRSF9Q13242 221 aaKnown RBP eCLIP15.91■□□□□ 0.14
CCDC7-206ENST00000476558 SH2D6Q7Z4S9 175 aa15.91■□□□□ 0.14
CCDC7-206ENST00000476558 NDUFA12Q9UI09 145 aa15.91■□□□□ 0.14
CCDC7-206ENST00000476558 KPRPQ5T749 579 aaPredicted RBP15.9■□□□□ 0.14
CCDC7-206ENST00000476558 MDFIQ99750 246 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms