RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 OXTP01178 125 aa6.16□□□□□ -1.42
VAPB-205ENST00000476395 SUMO4Q6EEV6 95 aa6.16□□□□□ -1.42
VAPB-205ENST00000476395 FAM223AQ8IWN6 122 aa6.16□□□□□ -1.42
VAPB-205ENST00000476395 LITAFQ99732 161 aa6.16□□□□□ -1.42
VAPB-205ENST00000476395 TRBV7-7A0A0K0K1E9 115 aa6.15□□□□□ -1.42
VAPB-205ENST00000476395 SDHAF1A6NFY7 115 aa6.15□□□□□ -1.42
VAPB-205ENST00000476395 I3L3M4 83 aa6.15□□□□□ -1.42
VAPB-205ENST00000476395 IGLV1-40P01703 118 aa6.15□□□□□ -1.42
VAPB-205ENST00000476395 TRACP01848 142 aa6.15□□□□□ -1.42
VAPB-205ENST00000476395 Q5XG85 94 aa6.15□□□□□ -1.42
VAPB-205ENST00000476395 DCANP1Q8TF63 244 aa6.15□□□□□ -1.42
VAPB-205ENST00000476395 MOB4Q9Y3A3 225 aa6.15□□□□□ -1.42
VAPB-205ENST00000476395 IGHV4OR15-8A0A075B7B6 117 aa6.15□□□□□ -1.43
VAPB-205ENST00000476395 A0A087WW49 117 aa6.15□□□□□ -1.43
VAPB-205ENST00000476395 hADV29S1A0JD25 119 aa6.15□□□□□ -1.43
VAPB-205ENST00000476395 NDUFA4O00483 81 aa6.15□□□□□ -1.43
VAPB-205ENST00000476395 MED14OSP0DP75 135 aa6.15□□□□□ -1.43
VAPB-205ENST00000476395 BLCAPP62952 87 aa6.15□□□□□ -1.43
VAPB-205ENST00000476395 GCN1Q92616 2671 aaKnown RBP6.15□□□□□ -1.43
VAPB-205ENST00000476395 NACAE9PAV3 2078 aa6.14□□□□□ -1.43
VAPB-205ENST00000476395 UBR5O95071 2799 aaPredicted RBP6.14□□□□□ -1.43
VAPB-205ENST00000476395 TRBV30A0A0K0K1B3 111 aa6.14□□□□□ -1.43
VAPB-205ENST00000476395 IGHG2P01859 326 aa6.14□□□□□ -1.43
VAPB-205ENST00000476395 IGHV4-61A0A0C4DH41 118 aa6.14□□□□□ -1.43
VAPB-205ENST00000476395 OVOL1O14753 267 aa6.14□□□□□ -1.43
VAPB-205ENST00000476395 AVPP01185 164 aa6.14□□□□□ -1.43
VAPB-205ENST00000476395 TRAV13-1A0A0B4J241 112 aa6.13□□□□□ -1.43
VAPB-205ENST00000476395 IGHV1-69DA0A0B4J2H0 117 aa6.13□□□□□ -1.43
VAPB-205ENST00000476395 A6NDX4 124 aa6.13□□□□□ -1.43
VAPB-205ENST00000476395 IGHV1-69P01742 117 aa6.13□□□□□ -1.43
VAPB-205ENST00000476395 IGHV3-11P01762 117 aa6.13□□□□□ -1.43
VAPB-205ENST00000476395 DPH3Q96FX2 82 aa6.13□□□□□ -1.43
VAPB-205ENST00000476395 C2CD3Q4AC94 2353 aa6.13□□□□□ -1.43
VAPB-205ENST00000476395 TRAV21A0A0B4J279 112 aa6.13□□□□□ -1.43
VAPB-205ENST00000476395 IGHV3-30-3P0DP02 117 aa6.13□□□□□ -1.43
VAPB-205ENST00000476395 RHOHQ15669 191 aa6.13□□□□□ -1.43
VAPB-205ENST00000476395 C10orf99Q6UWK7 81 aa6.13□□□□□ -1.43
VAPB-205ENST00000476395 LEPROTO15243 131 aa6.13□□□□□ -1.43
VAPB-205ENST00000476395 DSCR8Q96T75 97 aa6.13□□□□□ -1.43
VAPB-205ENST00000476395 CREBBPQ92793 2442 aa6.13□□□□□ -1.43
VAPB-205ENST00000476395 LST1O00453 97 aa6.12□□□□□ -1.43
VAPB-205ENST00000476395 TLN2Q9Y4G6 2542 aa6.12□□□□□ -1.43
VAPB-205ENST00000476395 LINC00526Q96FQ7 95 aa6.12□□□□□ -1.43
VAPB-205ENST00000476395 Q9UF83 564 aa6.12□□□□□ -1.43
VAPB-205ENST00000476395 NIPBLQ6KC79 2804 aaeCLIP6.11□□□□□ -1.43
VAPB-205ENST00000476395 RPL11P62913 178 aaKnown RBP6.11□□□□□ -1.43
VAPB-205ENST00000476395 LINC01561Q8N1V8 128 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 Q8N2B8 174 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 ZNF625Q96I27 306 aaPredicted RBP6.11□□□□□ -1.43
VAPB-205ENST00000476395 RHPN1-AS1Q9BWJ2 59 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 KMT2BQ9UMN6 2715 aaPredicted RBP6.11□□□□□ -1.43
VAPB-205ENST00000476395 NAV2Q8IVL1 2488 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.11□□□□□ -1.43
VAPB-205ENST00000476395 ITPR2Q14571 2701 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.11□□□□□ -1.431e-18■■■■■ 37.9
VAPB-205ENST00000476395 A0A087WVE0 104 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 TRBV27A0A0K0K1C4 114 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 H3BT86 120 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 RBMY1A1P0DJD3 496 aaKnown RBP6.11□□□□□ -1.43
VAPB-205ENST00000476395 RBMY1CP0DJD4 496 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 TMEM258P61165 79 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 RBMY1FQ15415 496 aaKnown RBP6.11□□□□□ -1.43
VAPB-205ENST00000476395 PAPPA-AS1Q5QFB9 102 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 ZNF843Q8N446 348 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 LINC00482Q8N8I6 264 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 C11orf45Q8TAV5 145 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 TIMM17AQ99595 171 aa6.11□□□□□ -1.43
VAPB-205ENST00000476395 CSPG4Q6UVK1 2322 aa6.1□□□□□ -1.43
VAPB-205ENST00000476395 LY6EQ16553 131 aa6.1□□□□□ -1.43
VAPB-205ENST00000476395 SDIM1Q6ZPB5 146 aa6.1□□□□□ -1.43
VAPB-205ENST00000476395 IGHV3-73A0A0B4J1V6 119 aa6.1□□□□□ -1.43
VAPB-205ENST00000476395 IGHV3-16A0A0C4DH30 117 aa6.1□□□□□ -1.43
VAPB-205ENST00000476395 C9orf129Q5T035 196 aaKnown RBP6.1□□□□□ -1.43
VAPB-205ENST00000476395 SERTAD4-AS1Q5TG53 156 aa6.1□□□□□ -1.43
VAPB-205ENST00000476395 FLNBO75369 2602 aaKnown RBP6.1□□□□□ -1.43
VAPB-205ENST00000476395 FAM240AA0A1B0GVK7 77 aa6.1□□□□□ -1.43
VAPB-205ENST00000476395 M0QY20 66 aa6.1□□□□□ -1.43
VAPB-205ENST00000476395 IGKV3-20P01619 116 aa6.1□□□□□ -1.43
VAPB-205ENST00000476395 DAZ2Q13117 558 aaKnown RBP6.1□□□□□ -1.43
VAPB-205ENST00000476395 DAZ4Q86SG3 579 aaKnown RBP6.1□□□□□ -1.43
VAPB-205ENST00000476395 DAZ1Q9NQZ3 744 aaKnown RBP6.1□□□□□ -1.43
VAPB-205ENST00000476395 DAZ3Q9NR90 486 aaKnown RBP6.1□□□□□ -1.43
VAPB-205ENST00000476395 IGLV4-3A0A075B6K6 122 aa6.09□□□□□ -1.43
VAPB-205ENST00000476395 TRBV6-5A0A0K0K1A5 114 aa6.09□□□□□ -1.43
VAPB-205ENST00000476395 H3BUA1 57 aa6.09□□□□□ -1.43
VAPB-205ENST00000476395 H3BUX3 64 aa6.09□□□□□ -1.43
VAPB-205ENST00000476395 PSMB8P28062 276 aa6.09□□□□□ -1.43
VAPB-205ENST00000476395 HOXD3P31249 432 aaPredicted RBP6.09□□□□□ -1.43
VAPB-205ENST00000476395 TMEM61Q8N0U2 210 aa6.09□□□□□ -1.43
VAPB-205ENST00000476395 TMEM141Q96I45 108 aa6.09□□□□□ -1.43
VAPB-205ENST00000476395 C22orf24Q9Y442 160 aa6.09□□□□□ -1.43
VAPB-205ENST00000476395 VCYO14598 125 aa6.09□□□□□ -1.43
VAPB-205ENST00000476395 DEFB121Q5J5C9 76 aa6.09□□□□□ -1.43
VAPB-205ENST00000476395 C10orf105Q8TEF2 133 aa6.09□□□□□ -1.43
VAPB-205ENST00000476395 LINC01600Q96MT4 127 aa6.09□□□□□ -1.43
VAPB-205ENST00000476395 TIMM21Q9BVV7 248 aa6.09□□□□□ -1.43
VAPB-205ENST00000476395 NDUFA12Q9UI09 145 aa6.09□□□□□ -1.43
VAPB-205ENST00000476395 TRAV12-2A0A075B6T6 113 aa6.08□□□□□ -1.44
VAPB-205ENST00000476395 USMG5Q96IX5 58 aa6.08□□□□□ -1.44
VAPB-205ENST00000476395 Q9HAA7 133 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms