RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 F2Z2F3 143 aa12□□□□□ -0.49
HDAC11-217ENST00000475818 RPL35P42766 123 aaKnown RBP12□□□□□ -0.49
HDAC11-217ENST00000475818 FAM19A5Q7Z5A7 132 aaPredicted RBP12□□□□□ -0.49
HDAC11-217ENST00000475818 COX7A2LO14548 114 aa11.99□□□□□ -0.49
HDAC11-217ENST00000475818 TCTE3Q8IZS6 198 aa11.99□□□□□ -0.49
HDAC11-217ENST00000475818 TSKUQ8WUA8 353 aa11.99□□□□□ -0.49
HDAC11-217ENST00000475818 SDHAF1A6NFY7 115 aa11.98□□□□□ -0.49
HDAC11-217ENST00000475818 C2orf48Q96LS8 159 aa11.98□□□□□ -0.49
HDAC11-217ENST00000475818 CARHSP1Q9Y2V2 147 aaKnown RBP11.98□□□□□ -0.49
HDAC11-217ENST00000475818 FXYD6-FXYD2A0A087WZ82 144 aa11.97□□□□□ -0.49
HDAC11-217ENST00000475818 IFNA1P01562 189 aa11.97□□□□□ -0.49
HDAC11-217ENST00000475818 TWIST1Q15672 202 aa11.97□□□□□ -0.49
HDAC11-217ENST00000475818 CDC42SE2Q9NRR3 84 aa11.97□□□□□ -0.49
HDAC11-217ENST00000475818 C19orf71A6NCJ1 209 aa11.96□□□□□ -0.49
HDAC11-217ENST00000475818 PMCHP20382 165 aa11.96□□□□□ -0.49
HDAC11-217ENST00000475818 CENPWQ5EE01 88 aa11.96□□□□□ -0.49
HDAC11-217ENST00000475818 SFT2D1Q8WV19 159 aa11.96□□□□□ -0.49
HDAC11-217ENST00000475818 XKRY2A2RUG3 117 aa11.95□□□□□ -0.5
HDAC11-217ENST00000475818 G3V3Q6 166 aa11.95□□□□□ -0.5
HDAC11-217ENST00000475818 UBE2BP63146 152 aa11.95□□□□□ -0.5
HDAC11-217ENST00000475818 SMLR1H3BR10 107 aa11.94□□□□□ -0.5
HDAC11-217ENST00000475818 I3L3M4 83 aa11.94□□□□□ -0.5
HDAC11-217ENST00000475818 ESDP10768 282 aa11.94□□□□□ -0.5
HDAC11-217ENST00000475818 SPAG11BQ08648 103 aa11.94□□□□□ -0.5
HDAC11-217ENST00000475818 C5orf38Q86SI9 138 aa11.94□□□□□ -0.5
HDAC11-217ENST00000475818 MRAP2Q96G30 205 aa11.94□□□□□ -0.5
HDAC11-217ENST00000475818 TMEM242Q9NWH2 141 aa11.94□□□□□ -0.5
HDAC11-217ENST00000475818 KCNRGQ8N5I3 272 aa11.93□□□□□ -0.5
HDAC11-217ENST00000475818 FAM213BQ8TBF2 198 aa11.93□□□□□ -0.5
HDAC11-217ENST00000475818 RETNLBQ9BQ08 111 aa11.93□□□□□ -0.5
HDAC11-217ENST00000475818 CDIP1Q9H305 208 aa11.93□□□□□ -0.5
HDAC11-217ENST00000475818 TSHBP01222 138 aa11.92□□□□□ -0.5
HDAC11-217ENST00000475818 CTRLP40313 264 aa11.92□□□□□ -0.5
HDAC11-217ENST00000475818 FOXA3P55318 350 aaPredicted RBP11.92□□□□□ -0.5
HDAC11-217ENST00000475818 RNF151Q2KHN1 245 aa11.92□□□□□ -0.5
HDAC11-217ENST00000475818 C1orf196B1AJZ1 125 aa11.91□□□□□ -0.5
HDAC11-217ENST00000475818 KRTAP7-1Q8IUC3 87 aa11.91□□□□□ -0.5
HDAC11-217ENST00000475818 C9orf62Q8N4C0 152 aa11.91□□□□□ -0.5
HDAC11-217ENST00000475818 M0QXV9 152 aa11.9□□□□□ -0.5
HDAC11-217ENST00000475818 GAGE2EQ4V326 116 aa11.9□□□□□ -0.5
HDAC11-217ENST00000475818 RNASE13Q5GAN3 156 aaKnown RBP11.9□□□□□ -0.5
HDAC11-217ENST00000475818 MRPL52Q86TS9 123 aaKnown RBP11.9□□□□□ -0.5
HDAC11-217ENST00000475818 MBD3L1Q8WWY6 194 aa11.9□□□□□ -0.5
HDAC11-217ENST00000475818 RPP21Q9H633 154 aaKnown RBP11.9□□□□□ -0.5
HDAC11-217ENST00000475818 CYTL1Q9NRR1 136 aa11.9□□□□□ -0.5
HDAC11-217ENST00000475818 GAGE2DQ9UEU5 116 aa11.9□□□□□ -0.5
HDAC11-217ENST00000475818 RAB19A4D1S5 217 aa11.89□□□□□ -0.51
HDAC11-217ENST00000475818 TRAV13-1A0A0B4J241 112 aa11.88□□□□□ -0.51
HDAC11-217ENST00000475818 IMMP2LQ96T52 175 aa11.88□□□□□ -0.51
HDAC11-217ENST00000475818 MRPL35Q9NZE8 188 aaKnown RBP11.88□□□□□ -0.51
HDAC11-217ENST00000475818 A0A087X002 238 aa11.87□□□□□ -0.51
HDAC11-217ENST00000475818 C11orf52Q96A22 123 aa11.87□□□□□ -0.51
HDAC11-217ENST00000475818 CNFNQ9BYD5 112 aa11.87□□□□□ -0.51
HDAC11-217ENST00000475818 RNASE7Q9H1E1 156 aaKnown RBP11.87□□□□□ -0.51
HDAC11-217ENST00000475818 GNG4P50150 75 aa11.86□□□□□ -0.51
HDAC11-217ENST00000475818 C10orf25Q5T742 122 aa11.86□□□□□ -0.51
HDAC11-217ENST00000475818 HMSDA8MTL9 139 aa11.85□□□□□ -0.51
HDAC11-217ENST00000475818 ZNF861PO60384 105 aa11.85□□□□□ -0.51
HDAC11-217ENST00000475818 TEX261Q6UWH6 196 aa11.85□□□□□ -0.51
HDAC11-217ENST00000475818 SMIM15Q7Z3B0 74 aa11.85□□□□□ -0.51
HDAC11-217ENST00000475818 TYMSOSQ8TAI1 123 aa11.85□□□□□ -0.51
HDAC11-217ENST00000475818 TRBV6-5A0A0K0K1A5 114 aa11.84□□□□□ -0.51
HDAC11-217ENST00000475818 C7orf77A4D0Y5 90 aa11.84□□□□□ -0.51
HDAC11-217ENST00000475818 ORAOV1Q8WV07 137 aa11.84□□□□□ -0.51
HDAC11-217ENST00000475818 ST20Q9HBF5 79 aa11.84□□□□□ -0.51
HDAC11-217ENST00000475818 NDUFA1O15239 70 aa11.83□□□□□ -0.52
HDAC11-217ENST00000475818 ARPC5O15511 151 aa11.83□□□□□ -0.52
HDAC11-217ENST00000475818 UNQ6190/PRO20217Q6UXQ8 127 aa11.83□□□□□ -0.52
HDAC11-217ENST00000475818 NUDT10Q8NFP7 164 aa11.83□□□□□ -0.52
HDAC11-217ENST00000475818 OR10D4PQ8NGN7 298 aa11.83□□□□□ -0.52
HDAC11-217ENST00000475818 NUDT11Q96G61 164 aa11.83□□□□□ -0.52
HDAC11-217ENST00000475818 GNG13Q9P2W3 67 aa11.83□□□□□ -0.52
HDAC11-217ENST00000475818 TLX1NBP0CAT3 122 aa11.82□□□□□ -0.52
HDAC11-217ENST00000475818 LINC01547P58512 204 aaPredicted RBP11.82□□□□□ -0.52
HDAC11-217ENST00000475818 CCL20P78556 96 aa11.82□□□□□ -0.52
HDAC11-217ENST00000475818 TPRXLQ17RH7 258 aa11.82□□□□□ -0.52
HDAC11-217ENST00000475818 SMDT1Q9H4I9 107 aa11.82□□□□□ -0.52
HDAC11-217ENST00000475818 C6orf48Q9UBA6 75 aa11.82□□□□□ -0.52
HDAC11-217ENST00000475818 H2AFB1P0C5Y9 115 aa11.81□□□□□ -0.52
HDAC11-217ENST00000475818 ZNF345Q14585 488 aa11.81□□□□□ -0.52
HDAC11-217ENST00000475818 SMIM12Q96EX1 92 aa11.81□□□□□ -0.52
HDAC11-217ENST00000475818 TRBV20OR9-2A0A075B6H5 130 aa11.8□□□□□ -0.52
HDAC11-217ENST00000475818 IGLV7-46A0A075B6I9 117 aa11.79□□□□□ -0.52
HDAC11-217ENST00000475818 UMAD1C9J7I0 102 aa11.79□□□□□ -0.52
HDAC11-217ENST00000475818 CRYGAP11844 174 aa11.79□□□□□ -0.52
HDAC11-217ENST00000475818 Q6ZUT4 128 aa11.79□□□□□ -0.52
HDAC11-217ENST00000475818 MANBALQ9NQG1 85 aa11.78□□□□□ -0.52
HDAC11-217ENST00000475818 BIN3Q9NQY0 253 aa11.78□□□□□ -0.52
HDAC11-217ENST00000475818 UBE2D4Q9Y2X8 147 aa11.78□□□□□ -0.52
HDAC11-217ENST00000475818 F8WDY8 70 aa11.77□□□□□ -0.53
HDAC11-217ENST00000475818 POLR2KP53803 58 aaKnown RBP11.77□□□□□ -0.53
HDAC11-217ENST00000475818 TMEM241Q24JQ0 296 aa11.77□□□□□ -0.53
HDAC11-217ENST00000475818 FCER1GP30273 86 aa11.76□□□□□ -0.53
HDAC11-217ENST00000475818 ANAPC11Q9NYG5 84 aa11.76□□□□□ -0.53
HDAC11-217ENST00000475818 TRBV27A0A0K0K1C4 114 aa11.75□□□□□ -0.53
HDAC11-217ENST00000475818 SRSF3P84103 164 aaKnown RBP11.75□□□□□ -0.53
HDAC11-217ENST00000475818 C9orf129Q5T035 196 aaKnown RBP11.75□□□□□ -0.53
HDAC11-217ENST00000475818 FAM210AQ96ND0 272 aa11.75□□□□□ -0.53
HDAC11-217ENST00000475818 CTDSP1Q9GZU7 261 aa11.75□□□□□ -0.53
HDAC11-217ENST00000475818 CSDC2Q9Y534 153 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms