RNA–Protein interactions for RNA: ENST00000475627.1

HLA-DMA-207, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 984 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-207ENST00000475627 HUWE1Q7Z6Z7 4374 aaKnown RBP5.7□□□□□ -1.5
HLA-DMA-207ENST00000475627 TRAV8-6A0A0B4J262 113 aa5.69□□□□□ -1.5
HLA-DMA-207ENST00000475627 TRAV26-2A0A0B4J265 109 aa5.69□□□□□ -1.5
HLA-DMA-207ENST00000475627 SDHAF1A6NFY7 115 aa5.69□□□□□ -1.5
HLA-DMA-207ENST00000475627 LINC01549A6NIU2 74 aa5.69□□□□□ -1.5
HLA-DMA-207ENST00000475627 I3L3M4 83 aa5.69□□□□□ -1.5
HLA-DMA-207ENST00000475627 UBE2D3P61077 147 aa5.69□□□□□ -1.5
HLA-DMA-207ENST00000475627 UBE2D2P62837 147 aa5.69□□□□□ -1.5
HLA-DMA-207ENST00000475627 ZFAND6Q6FIF0 208 aa5.69□□□□□ -1.5
HLA-DMA-207ENST00000475627 NEXN-AS1Q8NBZ9 246 aa5.69□□□□□ -1.5
HLA-DMA-207ENST00000475627 GTSF1LQ9H1H1 148 aa5.69□□□□□ -1.5
HLA-DMA-207ENST00000475627 COL7A1Q02388 2944 aa5.69□□□□□ -1.5
HLA-DMA-207ENST00000475627 TRBV25-1A0A075B6N4 114 aa5.68□□□□□ -1.5
HLA-DMA-207ENST00000475627 A0A096LPF7 62 aa5.68□□□□□ -1.5
HLA-DMA-207ENST00000475627 TRBV27A0A0K0K1C4 114 aa5.68□□□□□ -1.5
HLA-DMA-207ENST00000475627 UBE2L6O14933 153 aa5.68□□□□□ -1.5
HLA-DMA-207ENST00000475627 FOXI1Q12951 378 aa5.68□□□□□ -1.5
HLA-DMA-207ENST00000475627 ZNF664Q8N3J9 261 aa5.68□□□□□ -1.5
HLA-DMA-207ENST00000475627 PRSS3P2Q8NHM4 247 aa5.68□□□□□ -1.5
HLA-DMA-207ENST00000475627 TMEM70Q9BUB7 260 aa5.68□□□□□ -1.5
HLA-DMA-207ENST00000475627 SMIM2Q9BVW6 85 aa5.68□□□□□ -1.5
HLA-DMA-207ENST00000475627 IGHV1-24A0A0C4DH33 117 aa5.67□□□□□ -1.5
HLA-DMA-207ENST00000475627 hDV102S1A0JD36 115 aa5.67□□□□□ -1.5
HLA-DMA-207ENST00000475627 SMKR1H3BMG3 65 aa5.67□□□□□ -1.5
HLA-DMA-207ENST00000475627 LINC00694P0DN24 101 aa5.67□□□□□ -1.5
HLA-DMA-207ENST00000475627 ORMDL2Q53FV1 153 aa5.67□□□□□ -1.5
HLA-DMA-207ENST00000475627 CASC10Q5T4H9 136 aa5.67□□□□□ -1.5
HLA-DMA-207ENST00000475627 LELP1Q5T871 98 aa5.67□□□□□ -1.5
HLA-DMA-207ENST00000475627 FA2HQ7L5A8 372 aa5.67□□□□□ -1.5
HLA-DMA-207ENST00000475627 NRACQ8N912 160 aa5.67□□□□□ -1.5
HLA-DMA-207ENST00000475627 RPL39LQ96EH5 51 aaKnown RBP5.67□□□□□ -1.5
HLA-DMA-207ENST00000475627 CSDC2Q9Y534 153 aaKnown RBP5.67□□□□□ -1.5
HLA-DMA-207ENST00000475627 NACAE9PAV3 2078 aa5.67□□□□□ -1.5
HLA-DMA-207ENST00000475627 TRAV9-2A0A087WT02 112 aa5.66□□□□□ -1.5
HLA-DMA-207ENST00000475627 LOC100131303A0A0U1RQF7 123 aa5.66□□□□□ -1.5
HLA-DMA-207ENST00000475627 H7C423 109 aa5.66□□□□□ -1.5
HLA-DMA-207ENST00000475627 K7EP13 123 aa5.66□□□□□ -1.5
HLA-DMA-207ENST00000475627 NPYP01303 97 aa5.66□□□□□ -1.5
HLA-DMA-207ENST00000475627 AMTP48728 403 aa5.66□□□□□ -1.5
HLA-DMA-207ENST00000475627 KIAA1644Q3SXP7 199 aa5.66□□□□□ -1.5
HLA-DMA-207ENST00000475627 Q8N8P6 123 aa5.66□□□□□ -1.5
HLA-DMA-207ENST00000475627 TMEM243Q9BU79 118 aa5.66□□□□□ -1.5
HLA-DMA-207ENST00000475627 CHCHD7Q9BUK0 85 aa5.66□□□□□ -1.5
HLA-DMA-207ENST00000475627 APLNQ9ULZ1 77 aa5.66□□□□□ -1.5
HLA-DMA-207ENST00000475627 MRPS16Q9Y3D3 137 aaKnown RBP5.66□□□□□ -1.5
HLA-DMA-207ENST00000475627 A0A087WX48 190 aa5.65□□□□□ -1.5
HLA-DMA-207ENST00000475627 TRBV6-8A0A0A6YYG3 113 aa5.65□□□□□ -1.5
HLA-DMA-207ENST00000475627 POLR2KP53803 58 aaKnown RBP5.65□□□□□ -1.5
HLA-DMA-207ENST00000475627 IQCJQ1A5X6 159 aa5.65□□□□□ -1.5
HLA-DMA-207ENST00000475627 TTC32Q5I0X7 151 aa5.65□□□□□ -1.5
HLA-DMA-207ENST00000475627 LYPD5Q6UWN5 251 aa5.65□□□□□ -1.5
HLA-DMA-207ENST00000475627 BAGE3Q86Y29 109 aa5.65□□□□□ -1.5
HLA-DMA-207ENST00000475627 CHCHD5Q9BSY4 110 aa5.65□□□□□ -1.5
HLA-DMA-207ENST00000475627 UPK3BQ9BT76 320 aa5.65□□□□□ -1.5
HLA-DMA-207ENST00000475627 TGP01266 2768 aa5.64□□□□□ -1.51
HLA-DMA-207ENST00000475627 LOC389332A0A1B0GUA5 103 aa5.64□□□□□ -1.51
HLA-DMA-207ENST00000475627 ZNF25P17030 456 aaPredicted RBP5.64□□□□□ -1.51
HLA-DMA-207ENST00000475627 LAGE3Q14657 143 aa5.64□□□□□ -1.51
HLA-DMA-207ENST00000475627 AMMECR1LQ6DCA0 310 aa5.64□□□□□ -1.51
HLA-DMA-207ENST00000475627 LGALS9CQ6DKI2 356 aa5.64□□□□□ -1.51
HLA-DMA-207ENST00000475627 C10orf126Q8N4M7 172 aa5.64□□□□□ -1.51
HLA-DMA-207ENST00000475627 CHCHD1Q96BP2 118 aaKnown RBP5.64□□□□□ -1.51
HLA-DMA-207ENST00000475627 TMEM101Q96IK0 257 aa5.64□□□□□ -1.51
HLA-DMA-207ENST00000475627 IGHV3-38A0A0C4DH36 116 aa5.63□□□□□ -1.51
HLA-DMA-207ENST00000475627 HSBP1O75506 76 aa5.63□□□□□ -1.51
HLA-DMA-207ENST00000475627 LINC00614P0C842 121 aa5.63□□□□□ -1.51
HLA-DMA-207ENST00000475627 Q0VG73 95 aa5.63□□□□□ -1.51
HLA-DMA-207ENST00000475627 MRPL52Q86TS9 123 aaKnown RBP5.63□□□□□ -1.51
HLA-DMA-207ENST00000475627 C18orf32Q8TCD1 76 aa5.63□□□□□ -1.51
HLA-DMA-207ENST00000475627 TMEM262E9PQX1 116 aa5.62□□□□□ -1.51
HLA-DMA-207ENST00000475627 SIVA1O15304 175 aa5.62□□□□□ -1.51
HLA-DMA-207ENST00000475627 NUPR1O60356 82 aa5.62□□□□□ -1.51
HLA-DMA-207ENST00000475627 TSHBP01222 138 aa5.62□□□□□ -1.51
HLA-DMA-207ENST00000475627 ESDP10768 282 aa5.62□□□□□ -1.51
HLA-DMA-207ENST00000475627 IFI27P40305 119 aaPredicted RBP5.62□□□□□ -1.51
HLA-DMA-207ENST00000475627 ESRGQ1W209 222 aa5.62□□□□□ -1.51
HLA-DMA-207ENST00000475627 MAPKAPK5-AS1Q8N8E1 139 aa5.62□□□□□ -1.51
HLA-DMA-207ENST00000475627 SNHG12Q9BXW3 62 aa5.62□□□□□ -1.51
HLA-DMA-207ENST00000475627 CYSLTR1Q9Y271 337 aa5.62□□□□□ -1.51
HLA-DMA-207ENST00000475627 GAS8-AS1O95177 125 aa5.61□□□□□ -1.51
HLA-DMA-207ENST00000475627 HBDP02042 147 aa5.61□□□□□ -1.51
HLA-DMA-207ENST00000475627 CRPP02741 224 aa5.61□□□□□ -1.51
HLA-DMA-207ENST00000475627 LINC01556Q5JQF7 62 aa5.61□□□□□ -1.51
HLA-DMA-207ENST00000475627 Q6ZN92 141 aa5.61□□□□□ -1.51
HLA-DMA-207ENST00000475627 OR5A1Q8NGJ0 315 aa5.61□□□□□ -1.51
HLA-DMA-207ENST00000475627 SPANXA1Q9NS26 97 aa5.61□□□□□ -1.51
HLA-DMA-207ENST00000475627 LINC00588Q9Y4M8 146 aa5.61□□□□□ -1.51
HLA-DMA-207ENST00000475627 A0A1B0GUV1 79 aa5.6□□□□□ -1.51
HLA-DMA-207ENST00000475627 LINC01546A6NGU7 62 aa5.6□□□□□ -1.51
HLA-DMA-207ENST00000475627 M0R143 59 aa5.6□□□□□ -1.51
HLA-DMA-207ENST00000475627 LY6G6CO95867 125 aa5.6□□□□□ -1.51
HLA-DMA-207ENST00000475627 DNAH10OSP0CZ25 163 aa5.6□□□□□ -1.51
HLA-DMA-207ENST00000475627 TEX43Q6ZNM6 134 aa5.6□□□□□ -1.51
HLA-DMA-207ENST00000475627 C20orf203Q8NBC4 194 aa5.6□□□□□ -1.51
HLA-DMA-207ENST00000475627 RMI2Q96E14 147 aa5.6□□□□□ -1.51
HLA-DMA-207ENST00000475627 TIMM21Q9BVV7 248 aa5.6□□□□□ -1.51
HLA-DMA-207ENST00000475627 Q9UF83 564 aa5.6□□□□□ -1.51
HLA-DMA-207ENST00000475627 IGLV2-18A0A075B6J9 118 aa5.59□□□□□ -1.51
HLA-DMA-207ENST00000475627 ATP5LO75964 103 aa5.59□□□□□ -1.51
HLA-DMA-207ENST00000475627 FGF6P10767 208 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms