RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 URB1-AS1Q96HZ7 61 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 TIMM17AQ99595 171 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 TIMM21Q9BVV7 248 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 SPANXA1Q9NS26 97 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 DNAH10Q8IVF4 4471 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 TRBV25-1A0A075B6N4 114 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 A0A0J9YWU9 116 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 GAGE12JA6NER3 117 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 NUPR2A6NF83 97 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 UBE2L6O14933 153 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 CCL25O15444 150 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 GAS8-AS1O95177 125 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 GYPEP15421 78 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 ZNF25P17030 456 aaPredicted RBP4.92□□□□□ -1.62
SHQ1-207ENST00000475558 TCTAP57738 103 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 S100A12P80511 92 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 GAGE1Q13065 139 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 GAGE4Q13068 117 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 GAGE5Q13069 117 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 GAGE13Q4V321 117 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 C2orf66Q6UXQ4 117 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 TMEM101Q96IK0 257 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 ICOSQ9Y6W8 199 aa4.92□□□□□ -1.62
SHQ1-207ENST00000475558 DEFB131BA0A096LNP1 70 aa4.91□□□□□ -1.62
SHQ1-207ENST00000475558 TRBV6-8A0A0A6YYG3 113 aa4.91□□□□□ -1.62
SHQ1-207ENST00000475558 TRAV12-1A0A0B4J245 112 aa4.91□□□□□ -1.62
SHQ1-207ENST00000475558 SYS1-DBNDD2H3BUS1 97 aa4.91□□□□□ -1.62
SHQ1-207ENST00000475558 DEFB4AO15263 64 aa4.91□□□□□ -1.62
SHQ1-207ENST00000475558 SCGB1D1O95968 90 aa4.91□□□□□ -1.62
SHQ1-207ENST00000475558 TSHBP01222 138 aa4.91□□□□□ -1.62
SHQ1-207ENST00000475558 SMIM6P0DI80 62 aa4.91□□□□□ -1.62
SHQ1-207ENST00000475558 LINC00310P59036 64 aa4.91□□□□□ -1.62
SHQ1-207ENST00000475558 SEC11AP67812 179 aa4.91□□□□□ -1.62
SHQ1-207ENST00000475558 MRPS36P82909 103 aaKnown RBP4.91□□□□□ -1.62
SHQ1-207ENST00000475558 ANKRD39Q53RE8 183 aa4.91□□□□□ -1.62
SHQ1-207ENST00000475558 CEMP1Q6PRD7 247 aaPredicted RBP4.91□□□□□ -1.62
SHQ1-207ENST00000475558 TMEM243Q9BU79 118 aa4.91□□□□□ -1.62
SHQ1-207ENST00000475558 VCX2Q9H322 139 aa4.91□□□□□ -1.62
SHQ1-207ENST00000475558 KLK5Q9Y337 293 aaPredicted RBP4.91□□□□□ -1.62
SHQ1-207ENST00000475558 TRAV8-6A0A0B4J262 113 aa4.9□□□□□ -1.63
SHQ1-207ENST00000475558 A0A1B0GUV1 79 aa4.9□□□□□ -1.63
SHQ1-207ENST00000475558 IGIPA6NJ69 53 aa4.9□□□□□ -1.63
SHQ1-207ENST00000475558 IFITM10A6NMD0 228 aa4.9□□□□□ -1.63
SHQ1-207ENST00000475558 HSBP1L1C9JCN9 74 aa4.9□□□□□ -1.63
SHQ1-207ENST00000475558 KRTDAPP60985 99 aa4.9□□□□□ -1.63
SHQ1-207ENST00000475558 PMVKQ15126 192 aa4.9□□□□□ -1.63
SHQ1-207ENST00000475558 LGALS9CQ6DKI2 356 aa4.9□□□□□ -1.63
SHQ1-207ENST00000475558 MRPL52Q86TS9 123 aaKnown RBP4.9□□□□□ -1.63
SHQ1-207ENST00000475558 VSIG2Q96IQ7 327 aa4.9□□□□□ -1.63
SHQ1-207ENST00000475558 CHCHD7Q9BUK0 85 aa4.9□□□□□ -1.63
SHQ1-207ENST00000475558 HECTD4Q9Y4D8 3996 aa4.9□□□□□ -1.63
SHQ1-207ENST00000475558 K7EP13 123 aa4.89□□□□□ -1.63
SHQ1-207ENST00000475558 C3orf79P0CE67 100 aa4.89□□□□□ -1.63
SHQ1-207ENST00000475558 P0DMU3 169 aa4.89□□□□□ -1.63
SHQ1-207ENST00000475558 FAM231AP0DMU4 169 aa4.89□□□□□ -1.63
SHQ1-207ENST00000475558 FAM231CP0DMU5 169 aa4.89□□□□□ -1.63
SHQ1-207ENST00000475558 LINC00694P0DN24 101 aa4.89□□□□□ -1.63
SHQ1-207ENST00000475558 LELP1Q5T871 98 aa4.89□□□□□ -1.63
SHQ1-207ENST00000475558 AMMECR1LQ6DCA0 310 aa4.89□□□□□ -1.63
SHQ1-207ENST00000475558 C2orf88Q9BSF0 95 aa4.89□□□□□ -1.63
SHQ1-207ENST00000475558 CELA1Q9UNI1 258 aa4.89□□□□□ -1.63
SHQ1-207ENST00000475558 KIAA1109Q2LD37 5005 aa4.89□□□□□ -1.63
SHQ1-207ENST00000475558 MUC4Q99102 2169 aa4.88□□□□□ -1.63
SHQ1-207ENST00000475558 DNAH6Q9C0G6 4158 aa4.88□□□□□ -1.63
SHQ1-207ENST00000475558 A0A087WX48 190 aa4.88□□□□□ -1.63
SHQ1-207ENST00000475558 A0A096LNJ9 63 aa4.88□□□□□ -1.63
SHQ1-207ENST00000475558 HTN3P15516 51 aa4.88□□□□□ -1.63
SHQ1-207ENST00000475558 PLNP26678 52 aa4.88□□□□□ -1.63
SHQ1-207ENST00000475558 LINC01545Q5VT33 79 aa4.88□□□□□ -1.63
SHQ1-207ENST00000475558 Q6ZTC4 211 aa4.88□□□□□ -1.63
SHQ1-207ENST00000475558 OR5A1Q8NGJ0 315 aa4.88□□□□□ -1.63
SHQ1-207ENST00000475558 PHLDA1Q8WV24 401 aaPredicted RBP4.88□□□□□ -1.63
SHQ1-207ENST00000475558 CHCHD5Q9BSY4 110 aa4.88□□□□□ -1.63
SHQ1-207ENST00000475558 A0A096LPF7 62 aa4.87□□□□□ -1.63
SHQ1-207ENST00000475558 A0A0J9YY99 117 aa4.87□□□□□ -1.63
SHQ1-207ENST00000475558 TMEM262E9PQX1 116 aa4.87□□□□□ -1.63
SHQ1-207ENST00000475558 CCL18P55774 89 aa4.87□□□□□ -1.63
SHQ1-207ENST00000475558 NANOS2P60321 138 aaKnown RBP4.87□□□□□ -1.63
SHQ1-207ENST00000475558 LYPD5Q6UWN5 251 aa4.87□□□□□ -1.63
SHQ1-207ENST00000475558 TEX43Q6ZNM6 134 aa4.87□□□□□ -1.63
SHQ1-207ENST00000475558 ZNF664Q8N3J9 261 aa4.87□□□□□ -1.63
SHQ1-207ENST00000475558 CST9LQ9H4G1 147 aa4.87□□□□□ -1.63
SHQ1-207ENST00000475558 UBE2D4Q9Y2X8 147 aa4.87□□□□□ -1.63
SHQ1-207ENST00000475558 TRAV9-2A0A087WT02 112 aa4.86□□□□□ -1.63
SHQ1-207ENST00000475558 IGHV3-38A0A0C4DH36 116 aa4.86□□□□□ -1.63
SHQ1-207ENST00000475558 PRSS29PA6NIE9 313 aa4.86□□□□□ -1.63
SHQ1-207ENST00000475558 F8VRH5 84 aa4.86□□□□□ -1.63
SHQ1-207ENST00000475558 DPM2O94777 84 aa4.86□□□□□ -1.63
SHQ1-207ENST00000475558 IGKCP01834 107 aa4.86□□□□□ -1.63
SHQ1-207ENST00000475558 FGF6P10767 208 aa4.86□□□□□ -1.63
SHQ1-207ENST00000475558 NTM-AS1Q6ZSK4 140 aa4.86□□□□□ -1.63
SHQ1-207ENST00000475558 LINC00518Q8N0U6 118 aa4.86□□□□□ -1.63
SHQ1-207ENST00000475558 BAALCQ8WXS3 180 aa4.86□□□□□ -1.63
SHQ1-207ENST00000475558 AMELXQ99217 191 aa4.86□□□□□ -1.63
SHQ1-207ENST00000475558 Q9UF83 564 aa4.86□□□□□ -1.63
SHQ1-207ENST00000475558 CHTOPQ9Y3Y2 248 aaKnown RBP4.86□□□□□ -1.63
SHQ1-207ENST00000475558 VPS13DQ5THJ4 4388 aa4.86□□□□□ -1.63
SHQ1-207ENST00000475558 LOC100131303A0A0U1RQF7 123 aa4.85□□□□□ -1.63
SHQ1-207ENST00000475558 HERVK_113P61574 105 aa4.85□□□□□ -1.63
SHQ1-207ENST00000475558 PYY3Q5JQD4 70 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms