RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 SCGB1D1O95968 90 aa10.73□□□□□ -0.69
CPSF3-203ENST00000475482 LINC00694P0DN24 101 aa10.73□□□□□ -0.69
CPSF3-203ENST00000475482 MRPL23Q16540 153 aaKnown RBP10.73□□□□□ -0.69
CPSF3-203ENST00000475482 PAPPA-AS1Q5QFB9 102 aa10.73□□□□□ -0.69
CPSF3-203ENST00000475482 PET117Q6UWS5 81 aa10.73□□□□□ -0.69
CPSF3-203ENST00000475482 Q6ZN92 141 aa10.73□□□□□ -0.69
CPSF3-203ENST00000475482 TMEM141Q96I45 108 aa10.73□□□□□ -0.69
CPSF3-203ENST00000475482 ICOSQ9Y6W8 199 aa10.73□□□□□ -0.69
CPSF3-203ENST00000475482 LOC100131303A0A0U1RQF7 123 aa10.72□□□□□ -0.69
CPSF3-203ENST00000475482 SYS1-DBNDD2H3BUS1 97 aa10.72□□□□□ -0.69
CPSF3-203ENST00000475482 NPSP0C0P6 89 aa10.72□□□□□ -0.69
CPSF3-203ENST00000475482 SPATA12Q7Z6I5 190 aa10.72□□□□□ -0.69
CPSF3-203ENST00000475482 TIMM17AQ99595 171 aa10.72□□□□□ -0.69
CPSF3-203ENST00000475482 Q9H8V8 135 aa10.72□□□□□ -0.69
CPSF3-203ENST00000475482 TRBV25-1A0A075B6N4 114 aa10.71□□□□□ -0.69
CPSF3-203ENST00000475482 H7C423 109 aa10.71□□□□□ -0.69
CPSF3-203ENST00000475482 MRPS16Q9Y3D3 137 aaKnown RBP10.71□□□□□ -0.69
CPSF3-203ENST00000475482 PRSS1P07477 247 aa10.7□□□□□ -0.7
CPSF3-203ENST00000475482 LINC00173Q6ZV60 143 aa10.7□□□□□ -0.7
CPSF3-203ENST00000475482 C6orf223Q8N319 242 aa10.7□□□□□ -0.7
CPSF3-203ENST00000475482 TMEM243Q9BU79 118 aa10.7□□□□□ -0.7
CPSF3-203ENST00000475482 CHCHD7Q9BUK0 85 aa10.7□□□□□ -0.7
CPSF3-203ENST00000475482 SPANXA1Q9NS26 97 aa10.7□□□□□ -0.7
CPSF3-203ENST00000475482 PYGO1Q9Y3Y4 419 aa10.7□□□□□ -0.7
CPSF3-203ENST00000475482 UBE2L6O14933 153 aa10.69□□□□□ -0.7
CPSF3-203ENST00000475482 PYY3Q5JQD4 70 aa10.69□□□□□ -0.7
CPSF3-203ENST00000475482 DEFB104AQ8WTQ1 72 aa10.69□□□□□ -0.7
CPSF3-203ENST00000475482 TIMM21Q9BVV7 248 aa10.69□□□□□ -0.7
CPSF3-203ENST00000475482 KRTAP1-5Q9BYS1 174 aa10.69□□□□□ -0.7
CPSF3-203ENST00000475482 TRBV6-8A0A0A6YYG3 113 aa10.68□□□□□ -0.7
CPSF3-203ENST00000475482 H0Y8G0 127 aa10.68□□□□□ -0.7
CPSF3-203ENST00000475482 RPL39P62891 51 aaKnown RBP10.68□□□□□ -0.7
CPSF3-203ENST00000475482 TRAV12-1A0A0B4J245 112 aa10.67□□□□□ -0.7
CPSF3-203ENST00000475482 IGIPA6NJ69 53 aa10.67□□□□□ -0.7
CPSF3-203ENST00000475482 S100A12P80511 92 aa10.67□□□□□ -0.7
CPSF3-203ENST00000475482 TNP2Q05952 138 aa10.67□□□□□ -0.7
CPSF3-203ENST00000475482 DGAT2L7PQ6IED9 249 aa10.67□□□□□ -0.7
CPSF3-203ENST00000475482 PKIAP61925 76 aa10.66□□□□□ -0.7
CPSF3-203ENST00000475482 TTC32Q5I0X7 151 aa10.66□□□□□ -0.7
CPSF3-203ENST00000475482 LINC01545Q5VT33 79 aa10.66□□□□□ -0.7
CPSF3-203ENST00000475482 NTM-AS1Q6ZSK4 140 aa10.66□□□□□ -0.7
CPSF3-203ENST00000475482 TMEM101Q96IK0 257 aa10.66□□□□□ -0.7
CPSF3-203ENST00000475482 C12orf57Q99622 126 aa10.66□□□□□ -0.7
CPSF3-203ENST00000475482 CSDC2Q9Y534 153 aaKnown RBP10.66□□□□□ -0.7
CPSF3-203ENST00000475482 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.65□□□□□ -0.7
CPSF3-203ENST00000475482 IGKV2-29A2NJV5 120 aaPredicted RBP10.65□□□□□ -0.7
CPSF3-203ENST00000475482 ZNF25P17030 456 aaPredicted RBP10.65□□□□□ -0.7
CPSF3-203ENST00000475482 AMMECR1LQ6DCA0 310 aa10.65□□□□□ -0.7
CPSF3-203ENST00000475482 MRPL52Q86TS9 123 aaKnown RBP10.65□□□□□ -0.7
CPSF3-203ENST00000475482 LINC00518Q8N0U6 118 aa10.65□□□□□ -0.7
CPSF3-203ENST00000475482 UBE2D4Q9Y2X8 147 aa10.65□□□□□ -0.7
CPSF3-203ENST00000475482 LRP1BQ9NZR2 4599 aa10.65□□□□□ -0.7
CPSF3-203ENST00000475482 TIRAPP58753 221 aa10.64□□□□□ -0.71
CPSF3-203ENST00000475482 PMVKQ15126 192 aa10.64□□□□□ -0.71
CPSF3-203ENST00000475482 BAALCQ8WXS3 180 aa10.64□□□□□ -0.71
CPSF3-203ENST00000475482 CHCHD5Q9BSY4 110 aa10.64□□□□□ -0.71
CPSF3-203ENST00000475482 VCX2Q9H322 139 aa10.64□□□□□ -0.71
CPSF3-203ENST00000475482 RYR1P21817 5038 aa10.63□□□□□ -0.71
CPSF3-203ENST00000475482 A0A087WX48 190 aa10.63□□□□□ -0.71
CPSF3-203ENST00000475482 FGF6P10767 208 aa10.63□□□□□ -0.71
CPSF3-203ENST00000475482 MRPS36P82909 103 aaKnown RBP10.63□□□□□ -0.71
CPSF3-203ENST00000475482 IGLV4-3A0A075B6K6 122 aa10.62□□□□□ -0.71
CPSF3-203ENST00000475482 PLNP26678 52 aa10.62□□□□□ -0.71
CPSF3-203ENST00000475482 LELP1Q5T871 98 aa10.62□□□□□ -0.71
CPSF3-203ENST00000475482 LYPD5Q6UWN5 251 aa10.62□□□□□ -0.71
CPSF3-203ENST00000475482 TEX43Q6ZNM6 134 aa10.62□□□□□ -0.71
CPSF3-203ENST00000475482 Q8N976 141 aa10.62□□□□□ -0.71
CPSF3-203ENST00000475482 OR5A1Q8NGJ0 315 aa10.62□□□□□ -0.71
CPSF3-203ENST00000475482 C2orf88Q9BSF0 95 aa10.62□□□□□ -0.71
CPSF3-203ENST00000475482 HSBP1L1C9JCN9 74 aa10.61□□□□□ -0.71
CPSF3-203ENST00000475482 F8VRH5 84 aa10.61□□□□□ -0.71
CPSF3-203ENST00000475482 SIVA1O15304 175 aa10.61□□□□□ -0.71
CPSF3-203ENST00000475482 ODF1Q14990 250 aa10.61□□□□□ -0.71
CPSF3-203ENST00000475482 CHTOPQ9Y3Y2 248 aaKnown RBP10.61□□□□□ -0.71
CPSF3-203ENST00000475482 TRAV8-6A0A0B4J262 113 aa10.6□□□□□ -0.71
CPSF3-203ENST00000475482 DPM2O94777 84 aa10.6□□□□□ -0.71
CPSF3-203ENST00000475482 Q6ZRN7 208 aaPredicted RBP10.6□□□□□ -0.71
CPSF3-203ENST00000475482 VAMP8Q9BV40 100 aa10.6□□□□□ -0.71
CPSF3-203ENST00000475482 KRTAP17-1Q9BYP8 105 aa10.6□□□□□ -0.71
CPSF3-203ENST00000475482 CST9LQ9H4G1 147 aa10.6□□□□□ -0.71
CPSF3-203ENST00000475482 IGKCP01834 107 aa10.59□□□□□ -0.71
CPSF3-203ENST00000475482 GAGE6Q13070 117 aa10.59□□□□□ -0.71
CPSF3-203ENST00000475482 AMELXQ99217 191 aa10.59□□□□□ -0.71
CPSF3-203ENST00000475482 DNAH5Q8TE73 4624 aa10.58□□□□□ -0.72
CPSF3-203ENST00000475482 TRAV9-2A0A087WT02 112 aa10.58□□□□□ -0.72
CPSF3-203ENST00000475482 A0A1B0GUV1 79 aa10.58□□□□□ -0.72
CPSF3-203ENST00000475482 TMEM262E9PQX1 116 aa10.58□□□□□ -0.72
CPSF3-203ENST00000475482 ZNF664Q8N3J9 261 aa10.58□□□□□ -0.72
CPSF3-203ENST00000475482 HSPG2P98160 4391 aa10.57□□□□□ -0.72
CPSF3-203ENST00000475482 SEC11AP67812 179 aa10.57□□□□□ -0.72
CPSF3-203ENST00000475482 PMCHL2Q9BQD1 86 aa10.57□□□□□ -0.72
CPSF3-203ENST00000475482 MRPL35Q9NZE8 188 aaKnown RBP10.57□□□□□ -0.72
CPSF3-203ENST00000475482 Q6ZUT4 128 aa10.56□□□□□ -0.72
CPSF3-203ENST00000475482 ATOH7Q8N100 152 aa10.56□□□□□ -0.72
CPSF3-203ENST00000475482 OPRPNQ99935 248 aaPredicted RBP10.56□□□□□ -0.72
CPSF3-203ENST00000475482 CDC42SE2Q9NRR3 84 aa10.56□□□□□ -0.72
CPSF3-203ENST00000475482 K7EP13 123 aa10.55□□□□□ -0.72
CPSF3-203ENST00000475482 APOBP04114 4563 aaKnown RBP10.54□□□□□ -0.72
CPSF3-203ENST00000475482 C16orf90A8MZG2 172 aa10.54□□□□□ -0.72
CPSF3-203ENST00000475482 DNAH10OSP0CZ25 163 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms