RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 MYO9AB2RTY4 2548 aa9.53□□□□□ -0.88
CCNL1-216ENST00000475298 TRAV8-3A0A0A6YYJ7 113 aa9.52□□□□□ -0.88
CCNL1-216ENST00000475298 ADARB2-AS1A8MUL3 147 aa9.52□□□□□ -0.88
CCNL1-216ENST00000475298 CR1P17927 2039 aa9.52□□□□□ -0.89
CCNL1-216ENST00000475298 ZNF256Q9Y2P7 627 aaPredicted RBP9.52□□□□□ -0.89
CCNL1-216ENST00000475298 NXPH4O95158 308 aa9.51□□□□□ -0.89
CCNL1-216ENST00000475298 SPINK13Q1W4C9 94 aa9.51□□□□□ -0.89
CCNL1-216ENST00000475298 HIST2H2BDQ6DRA6 164 aa9.51□□□□□ -0.89
CCNL1-216ENST00000475298 C18orf65Q6ZTR6 163 aa9.51□□□□□ -0.89
CCNL1-216ENST00000475298 OXTP01178 125 aa9.51□□□□□ -0.89
CCNL1-216ENST00000475298 PRSS2P07478 247 aa9.51□□□□□ -0.89
CCNL1-216ENST00000475298 DEFB136Q30KP8 78 aa9.51□□□□□ -0.89
CCNL1-216ENST00000475298 FAM74A4Q5TZK3 123 aa9.51□□□□□ -0.89
CCNL1-216ENST00000475298 SUMO4Q6EEV6 95 aa9.51□□□□□ -0.89
CCNL1-216ENST00000475298 KIR2DL5BQ8NHK3 375 aa9.51□□□□□ -0.89
CCNL1-216ENST00000475298 ZNF702PQ9H963 129 aa9.51□□□□□ -0.89
CCNL1-216ENST00000475298 hADV29S1A0JD25 119 aa9.5□□□□□ -0.89
CCNL1-216ENST00000475298 F5H697 171 aa9.5□□□□□ -0.89
CCNL1-216ENST00000475298 K7EQG2 157 aa9.5□□□□□ -0.89
CCNL1-216ENST00000475298 VCYO14598 125 aa9.5□□□□□ -0.89
CCNL1-216ENST00000475298 IGHV4-31P0DP07 118 aa9.5□□□□□ -0.89
CCNL1-216ENST00000475298 HOXD3P31249 432 aaPredicted RBP9.5□□□□□ -0.89
CCNL1-216ENST00000475298 HIST1H4AP62805 103 aaKnown RBP9.5□□□□□ -0.89
CCNL1-216ENST00000475298 J3QLI3 93 aa9.5□□□□□ -0.89
CCNL1-216ENST00000475298 PLA2G2AP14555 144 aa9.5□□□□□ -0.89
CCNL1-216ENST00000475298 PRRC2AP48634 2157 aaKnown RBP9.49□□□□□ -0.89
CCNL1-216ENST00000475298 J3QKU1 62 aa9.49□□□□□ -0.89
CCNL1-216ENST00000475298 CXCL5P42830 114 aa9.49□□□□□ -0.89
CCNL1-216ENST00000475298 SNRPD3P62318 126 aaKnown RBP9.49□□□□□ -0.89
CCNL1-216ENST00000475298 DPH3Q96FX2 82 aa9.49□□□□□ -0.89
CCNL1-216ENST00000475298 SPANXCQ9NY87 97 aa9.49□□□□□ -0.89
CCNL1-216ENST00000475298 CUBNO60494 3623 aa9.49□□□□□ -0.89
CCNL1-216ENST00000475298 A0A0J9YXV3 536 aa9.49□□□□□ -0.89
CCNL1-216ENST00000475298 IGHV3-30-3P0DP02 117 aa9.49□□□□□ -0.89
CCNL1-216ENST00000475298 Q6YL49 198 aa9.49□□□□□ -0.89
CCNL1-216ENST00000475298 TMEM61Q8N0U2 210 aa9.49□□□□□ -0.89
CCNL1-216ENST00000475298 IGHV3-16A0A0C4DH30 117 aa9.48□□□□□ -0.89
CCNL1-216ENST00000475298 TRBV27A0A0K0K1C4 114 aa9.48□□□□□ -0.89
CCNL1-216ENST00000475298 NBPF19A0A087WUL8 3843 aa9.48□□□□□ -0.89
CCNL1-216ENST00000475298 APCP25054 2843 aa9.48□□□□□ -0.89
CCNL1-216ENST00000475298 FSHBP01225 129 aa9.48□□□□□ -0.89
CCNL1-216ENST00000475298 SLURP1P55000 103 aa9.48□□□□□ -0.89
CCNL1-216ENST00000475298 NPC2P61916 151 aa9.48□□□□□ -0.89
CCNL1-216ENST00000475298 TIMM21Q9BVV7 248 aa9.48□□□□□ -0.89
CCNL1-216ENST00000475298 SONP18583 2426 aaKnown RBP9.47□□□□□ -0.89
CCNL1-216ENST00000475298 TMEM89A2RUT3 159 aa9.47□□□□□ -0.89
CCNL1-216ENST00000475298 RHOHQ15669 191 aa9.47□□□□□ -0.89
CCNL1-216ENST00000475298 MIAQ16674 131 aa9.47□□□□□ -0.89
CCNL1-216ENST00000475298 C4orf26Q17RF5 130 aa9.47□□□□□ -0.89
CCNL1-216ENST00000475298 C9orf85Q96MD7 179 aa9.46□□□□□ -0.89
CCNL1-216ENST00000475298 Q5XG85 94 aa9.46□□□□□ -0.9
CCNL1-216ENST00000475298 PEMTQ9UBM1 199 aa9.46□□□□□ -0.9
CCNL1-216ENST00000475298 NF1P21359 2839 aa9.45□□□□□ -0.9
CCNL1-216ENST00000475298 KNCNA6PVL3 124 aa9.45□□□□□ -0.9
CCNL1-216ENST00000475298 F5H768 121 aa9.45□□□□□ -0.9
CCNL1-216ENST00000475298 TRACP01848 142 aa9.45□□□□□ -0.9
CCNL1-216ENST00000475298 HTN1P15515 57 aa9.45□□□□□ -0.9
CCNL1-216ENST00000475298 ZNF843Q8N446 348 aa9.45□□□□□ -0.9
CCNL1-216ENST00000475298 UBE2E2Q96LR5 201 aa9.45□□□□□ -0.9
CCNL1-216ENST00000475298 C22orf24Q9Y442 160 aa9.45□□□□□ -0.9
CCNL1-216ENST00000475298 IGHV1OR15-1A0A075B7D0 117 aa9.45□□□□□ -0.9
CCNL1-216ENST00000475298 PRM2P04554 102 aa9.45□□□□□ -0.9
CCNL1-216ENST00000475298 RBMY1A1P0DJD3 496 aaKnown RBP9.45□□□□□ -0.9
CCNL1-216ENST00000475298 RBMY1CP0DJD4 496 aa9.45□□□□□ -0.9
CCNL1-216ENST00000475298 RBMY1FQ15415 496 aaKnown RBP9.45□□□□□ -0.9
CCNL1-216ENST00000475298 TRBV6-5A0A0K0K1A5 114 aa9.44□□□□□ -0.9
CCNL1-216ENST00000475298 ATOX1O00244 68 aa9.44□□□□□ -0.9
CCNL1-216ENST00000475298 NSUN5P1Q3KNT7 163 aa9.44□□□□□ -0.9
CCNL1-216ENST00000475298 IGLV4-3A0A075B6K6 122 aa9.44□□□□□ -0.9
CCNL1-216ENST00000475298 TMEM258P61165 79 aa9.44□□□□□ -0.9
CCNL1-216ENST00000475298 DAZ2Q13117 558 aaKnown RBP9.44□□□□□ -0.9
CCNL1-216ENST00000475298 DAZ4Q86SG3 579 aaKnown RBP9.44□□□□□ -0.9
CCNL1-216ENST00000475298 CITED2Q99967 270 aaPredicted RBP9.44□□□□□ -0.9
CCNL1-216ENST00000475298 UPK3BQ9BT76 320 aa9.44□□□□□ -0.9
CCNL1-216ENST00000475298 DAZ3Q9NR90 486 aaKnown RBP9.44□□□□□ -0.9
CCNL1-216ENST00000475298 ITPR3Q14573 2671 aa9.44□□□□□ -0.9
CCNL1-216ENST00000475298 AKAP9Q99996 3911 aa9.43□□□□□ -0.9
CCNL1-216ENST00000475298 Q96MF0 132 aa9.43□□□□□ -0.9
CCNL1-216ENST00000475298 DSCR8Q96T75 97 aa9.43□□□□□ -0.9
CCNL1-216ENST00000475298 KHDC1LQ5JSQ8 128 aa9.43□□□□□ -0.9
CCNL1-216ENST00000475298 HRCT1Q6UXD1 115 aa9.43□□□□□ -0.9
CCNL1-216ENST00000475298 M0QY20 66 aa9.42□□□□□ -0.9
CCNL1-216ENST00000475298 DEFB131AP59861 70 aa9.42□□□□□ -0.9
CCNL1-216ENST00000475298 DEFB113Q30KQ7 82 aa9.42□□□□□ -0.9
CCNL1-216ENST00000475298 BEAN1Q3B7T3 259 aa9.42□□□□□ -0.9
CCNL1-216ENST00000475298 FAM104AQ969W3 186 aa9.42□□□□□ -0.9
CCNL1-216ENST00000475298 NDUFA12Q9UI09 145 aa9.42□□□□□ -0.9
CCNL1-216ENST00000475298 A8MZ25 164 aa9.42□□□□□ -0.9
CCNL1-216ENST00000475298 TIRAPP58753 221 aa9.42□□□□□ -0.9
CCNL1-216ENST00000475298 C20orf203Q8NBC4 194 aa9.42□□□□□ -0.9
CCNL1-216ENST00000475298 CCDC168Q8NDH2 2452 aa9.41□□□□□ -0.9
CCNL1-216ENST00000475298 IGHV3-73A0A0B4J1V6 119 aa9.41□□□□□ -0.9
CCNL1-216ENST00000475298 RNF152Q8N8N0 203 aa9.41□□□□□ -0.9
CCNL1-216ENST00000475298 IGHV1-58A0A0C4DH39 117 aa9.41□□□□□ -0.9
CCNL1-216ENST00000475298 RBMY1BA6NDE4 496 aaKnown RBP9.4□□□□□ -0.9
CCNL1-216ENST00000475298 RBMY1EA6NEQ0 496 aaKnown RBP9.4□□□□□ -0.9
CCNL1-216ENST00000475298 RBMY1DP0C7P1 496 aaKnown RBP9.4□□□□□ -0.9
CCNL1-216ENST00000475298 RPL18AQ02543 176 aaKnown RBP9.4□□□□□ -0.9
CCNL1-216ENST00000475298 DAND5Q8N907 189 aa9.4□□□□□ -0.9
CCNL1-216ENST00000475298 SETD2Q9BYW2 2564 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms