RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 CHKB-CPT1BH3BT56 60 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 K7EN84 100 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 PROP1O75360 226 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 IGLC3P0DOY3 106 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 KLK9Q2XQG4 91 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 LINC01556Q5JQF7 62 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 HIST2H2BDQ6DRA6 164 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 FAM208BQ5VWN6 2430 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 A0A0B4J2C4 111 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 C9orf118A6NHY6 69 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 PRYO14603 147 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 BAALC-AS2P0C853 105 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 HAMPP81172 84 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 SRSF3P84103 164 aaKnown RBP3.37□□□□□ -1.87
CCNL1-215ENST00000474539 EML6Q6ZMW3 1958 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 MIR7-3HGQ8N6C7 128 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 CNFNQ9BYD5 112 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 TTC28Q96AY4 2481 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 TRBV10-2A0A0K0K1G8 114 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 CDSNQ15517 529 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.36□□□□□ -1.87
CCNL1-215ENST00000474539 SIGMAR1Q99720 223 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 HIGD2AQ9BW72 106 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 ESM1Q9NQ30 184 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 TNRC6AQ8NDV7 1962 aaKnown RBP3.36□□□□□ -1.87
CCNL1-215ENST00000474539 LINC00959A0A1B0GUT2 108 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 PLAC8L1A1L4L8 177 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 J3KT08 172 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 Q6ZUT4 128 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 C20orf173Q96LM9 149 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 PKDREJQ9NTG1 2253 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 DEFB105AQ8NG35 78 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 SMR3AQ99954 134 aa3.36□□□□□ -1.87
CCNL1-215ENST00000474539 A0A1B0GXF2 115 aa3.35□□□□□ -1.87
CCNL1-215ENST00000474539 NAA38Q9BRA0 125 aaKnown RBP3.35□□□□□ -1.87
CCNL1-215ENST00000474539 TRAV23DV6A0A075B6W5 121 aa3.35□□□□□ -1.87
CCNL1-215ENST00000474539 TP53TG3Q9ULZ0 132 aa3.35□□□□□ -1.87
CCNL1-215ENST00000474539 UNC80Q8N2C7 3258 aa3.35□□□□□ -1.87
CCNL1-215ENST00000474539 RNASE8Q8TDE3 154 aaKnown RBP3.35□□□□□ -1.87
CCNL1-215ENST00000474539 CPAMD8Q8IZJ3 1885 aa3.34□□□□□ -1.87
CCNL1-215ENST00000474539 SNRNP200O75643 2136 aaKnown RBP3.34□□□□□ -1.87
CCNL1-215ENST00000474539 IGLV2-18A0A075B6J9 118 aa3.34□□□□□ -1.87
CCNL1-215ENST00000474539 IGLV4-3A0A075B6K6 122 aa3.34□□□□□ -1.87
CCNL1-215ENST00000474539 NCR3O14931 201 aa3.34□□□□□ -1.87
CCNL1-215ENST00000474539 BRWD1-AS2P59051 145 aa3.34□□□□□ -1.87
CCNL1-215ENST00000474539 PCNX1Q96RV3 2341 aa3.34□□□□□ -1.87
CCNL1-215ENST00000474539 A0A1B0GW54 56 aa3.34□□□□□ -1.88
CCNL1-215ENST00000474539 C12orf74Q32Q52 190 aa3.34□□□□□ -1.88
CCNL1-215ENST00000474539 C10orf25Q5T742 122 aa3.34□□□□□ -1.88
CCNL1-215ENST00000474539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.34□□□□□ -1.889e-8■■■■□ 24
CCNL1-215ENST00000474539 Q6ZTC4 211 aa3.34□□□□□ -1.88
CCNL1-215ENST00000474539 MDFIQ99750 246 aa3.34□□□□□ -1.88
CCNL1-215ENST00000474539 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.33□□□□□ -1.88
CCNL1-215ENST00000474539 A0A1W2PPR1 153 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 NDUFC2O95298 119 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 TMEM258P61165 79 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 FHL2Q14192 279 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 FAM19A5Q7Z5A7 132 aaPredicted RBP3.33□□□□□ -1.88
CCNL1-215ENST00000474539 MUSTN1Q8IVN3 82 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 KIAA2026Q5HYC2 2103 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 A0A1B0GV90 55 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 TMEM223A0PJW6 202 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 H0Y9J4 135 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 K7ERS5 55 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 M0R2N4 97 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
CCNL1-215ENST00000474539 LYPD5Q6UWN5 251 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 MED12LQ86YW9 2145 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 POLR2KP53803 58 aaKnown RBP3.33□□□□□ -1.88
CCNL1-215ENST00000474539 CRIP3Q6Q6R5 217 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 WNK2Q9Y3S1 2297 aa3.33□□□□□ -1.88
CCNL1-215ENST00000474539 MED13Q9UHV7 2174 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 K7EP34 96 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 M0QXV9 152 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 RNASE3P12724 160 aaKnown RBP3.32□□□□□ -1.88
CCNL1-215ENST00000474539 CASC2Q6XLA1 102 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 LINC00337Q8N6G1 96 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 ANAPC13Q9BS18 74 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 CDC42SE2Q9NRR3 84 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 CUL9Q8IWT3 2517 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 COL6A3P12111 3177 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 RANBP2P49792 3224 aaKnown RBP3.32□□□□□ -1.88
CCNL1-215ENST00000474539 C10orf99Q6UWK7 81 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 C1orf158Q8N1D5 194 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 TNRC6BQ9UPQ9 1833 aaKnown RBP3.32□□□□□ -1.88
CCNL1-215ENST00000474539 MED12Q93074 2177 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 NAV3Q8IVL0 2385 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 USP17L23D6RBM5 183 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 NDUFC2-KCTD14E9PQ53 114 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 BPY2O14599 106 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 TP73-AS1Q9UF72 201 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 NBDYA0A0U1RRE5 68 aa3.32□□□□□ -1.88
CCNL1-215ENST00000474539 ZNF80P51504 273 aaPredicted RBP3.32□□□□□ -1.88
CCNL1-215ENST00000474539 RPL39P62891 51 aaKnown RBP3.32□□□□□ -1.88
CCNL1-215ENST00000474539 A0A1W2PPM0 123 aa3.31□□□□□ -1.88
CCNL1-215ENST00000474539 TSHBP01222 138 aa3.31□□□□□ -1.88
CCNL1-215ENST00000474539 ZNF22P17026 224 aaPredicted RBP3.31□□□□□ -1.88
CCNL1-215ENST00000474539 ATOX1O00244 68 aa3.31□□□□□ -1.88
CCNL1-215ENST00000474539 UBE2V1Q13404 147 aa3.31□□□□□ -1.88
CCNL1-215ENST00000474539 NRACQ8N912 160 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms